RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 TPD52L3Q96J77 140 aa17.16■□□□□ 0.34
LIMD2-209ENST00000580222 PLA2G12AQ9BZM1 189 aa17.16■□□□□ 0.34
LIMD2-209ENST00000580222 RPS6KA6Q9UK32 745 aa17.16■□□□□ 0.34
LIMD2-209ENST00000580222 CFAP73A6NFT4 308 aa17.15■□□□□ 0.34
LIMD2-209ENST00000580222 CLOCKO15516 846 aa17.15■□□□□ 0.34
LIMD2-209ENST00000580222 SSX4O60224 188 aa17.15■□□□□ 0.34
LIMD2-209ENST00000580222 FESP07332 822 aa17.15■□□□□ 0.34
LIMD2-209ENST00000580222 UQCRBP14927 111 aa17.15■□□□□ 0.34
LIMD2-209ENST00000580222 PTNP21246 168 aa17.15■□□□□ 0.34
LIMD2-209ENST00000580222 THBS2P35442 1172 aa17.15■□□□□ 0.34
LIMD2-209ENST00000580222 TRIM25Q14258 630 aaKnown RBP17.15■□□□□ 0.34
LIMD2-209ENST00000580222 COMTD1Q86VU5 262 aa17.15■□□□□ 0.34
LIMD2-209ENST00000580222 ZNF563Q8TA94 476 aa17.15■□□□□ 0.34
LIMD2-209ENST00000580222 VANGL1Q8TAA9 524 aaPredicted RBP17.15■□□□□ 0.34
LIMD2-209ENST00000580222 FBXW5Q969U6 566 aa17.15■□□□□ 0.34
LIMD2-209ENST00000580222 ASB9Q96DX5 294 aa17.15■□□□□ 0.34
LIMD2-209ENST00000580222 TNFRSF13CQ96RJ3 184 aa17.15■□□□□ 0.34
LIMD2-209ENST00000580222 KLHDC3Q9BQ90 382 aa17.15■□□□□ 0.34
LIMD2-209ENST00000580222 RSPO3Q9BXY4 272 aaPredicted RBP17.15■□□□□ 0.34
LIMD2-209ENST00000580222 EVA1AQ9H8M9 152 aa17.15■□□□□ 0.34
LIMD2-209ENST00000580222 GORASP2Q9H8Y8 452 aa17.15■□□□□ 0.34
LIMD2-209ENST00000580222 TMEM160Q9NX00 188 aa17.15■□□□□ 0.34
LIMD2-209ENST00000580222 ACTR3BQ9P1U1 418 aa17.15■□□□□ 0.34
LIMD2-209ENST00000580222 SAMD4AQ9UPU9 718 aaKnown RBP17.15■□□□□ 0.34
LIMD2-209ENST00000580222 ZNF175Q9Y473 711 aa17.15■□□□□ 0.34
LIMD2-209ENST00000580222 A0A087WZY1 265 aa17.14■□□□□ 0.33
LIMD2-209ENST00000580222 M0R3H8 397 aa17.14■□□□□ 0.33
LIMD2-209ENST00000580222 AP3D1O14617 1153 aa17.14■□□□□ 0.33
LIMD2-209ENST00000580222 LGI1O95970 557 aa17.14■□□□□ 0.33
LIMD2-209ENST00000580222 LINGO3P0C6S8 592 aa17.14■□□□□ 0.33
LIMD2-209ENST00000580222 ATP6V1B2P21281 511 aa17.14■□□□□ 0.33
LIMD2-209ENST00000580222 SELENOWP63302 87 aa17.14■□□□□ 0.33
LIMD2-209ENST00000580222 EPS8Q12929 822 aa17.14■□□□□ 0.33
LIMD2-209ENST00000580222 ZSCAN26Q16670 478 aa17.14■□□□□ 0.33
LIMD2-209ENST00000580222 RAET1LQ5VY80 246 aa17.14■□□□□ 0.33
LIMD2-209ENST00000580222 PGM2L1Q6PCE3 622 aa17.14■□□□□ 0.33
LIMD2-209ENST00000580222 CYP2R1Q6VVX0 501 aa17.14■□□□□ 0.33
LIMD2-209ENST00000580222 CBLL1Q75N03 491 aa17.14■□□□□ 0.33
LIMD2-209ENST00000580222 OR10H5Q8NGA6 315 aa17.14■□□□□ 0.33
LIMD2-209ENST00000580222 GPR119Q8TDV5 335 aa17.14■□□□□ 0.33
LIMD2-209ENST00000580222 SLC35B4Q969S0 331 aa17.14■□□□□ 0.33
LIMD2-209ENST00000580222 MMADHCQ9H3L0 296 aaPredicted RBP17.14■□□□□ 0.33
LIMD2-209ENST00000580222 MED17Q9NVC6 651 aa17.14■□□□□ 0.33
LIMD2-209ENST00000580222 SLC9A8Q9Y2E8 581 aa17.14■□□□□ 0.33
LIMD2-209ENST00000580222 RNF115Q9Y4L5 304 aa17.14■□□□□ 0.33
LIMD2-209ENST00000580222 ALPK2Q86TB3 2170 aa17.13■□□□□ 0.33
LIMD2-209ENST00000580222 VLDLRP98155 873 aa17.13■□□□□ 0.33
LIMD2-209ENST00000580222 QPRTQ15274 297 aa17.13■□□□□ 0.33
LIMD2-209ENST00000580222 TSC22D1Q15714 1073 aa17.13■□□□□ 0.33
LIMD2-209ENST00000580222 TOMM34Q15785 309 aaPredicted RBP17.13■□□□□ 0.33
LIMD2-209ENST00000580222 NRF1Q16656 503 aa17.13■□□□□ 0.33
LIMD2-209ENST00000580222 PLPPR5Q32ZL2 321 aa17.13■□□□□ 0.33
LIMD2-209ENST00000580222 ZNF672Q499Z4 452 aaPredicted RBP17.13■□□□□ 0.33
LIMD2-209ENST00000580222 NCMAPQ5T1S8 102 aa17.13■□□□□ 0.33
LIMD2-209ENST00000580222 LCN8Q6JVE9 175 aa17.13■□□□□ 0.33
LIMD2-209ENST00000580222 ASRGL1Q7L266 308 aa17.13■□□□□ 0.33
LIMD2-209ENST00000580222 RANBP3LQ86VV4 465 aaPredicted RBP17.13■□□□□ 0.33
LIMD2-209ENST00000580222 DHFR2Q86XF0 187 aa17.13■□□□□ 0.33
LIMD2-209ENST00000580222 HSH2DQ96JZ2 352 aa17.13■□□□□ 0.33
LIMD2-209ENST00000580222 LRGUKQ96M69 825 aa17.13■□□□□ 0.33
LIMD2-209ENST00000580222 ARHGDIGQ99819 225 aa17.13■□□□□ 0.33
LIMD2-209ENST00000580222 TRAF4Q9BUZ4 470 aaPredicted RBP17.13■□□□□ 0.33
LIMD2-209ENST00000580222 TRIM15Q9C019 465 aa17.13■□□□□ 0.33
LIMD2-209ENST00000580222 DCAF13Q9NV06 445 aaKnown RBP17.13■□□□□ 0.33
LIMD2-209ENST00000580222 TESQ9UGI8 421 aaKnown RBP17.13■□□□□ 0.33
LIMD2-209ENST00000580222 SH3GLB1Q9Y371 365 aa17.13■□□□□ 0.33
LIMD2-209ENST00000580222 V9GYQ6 96 aa17.13■□□□□ 0.33
LIMD2-209ENST00000580222 MGAM2Q2M2H8 2515 aa17.12■□□□□ 0.33
LIMD2-209ENST00000580222 PRG2P13727 222 aa17.12■□□□□ 0.33
LIMD2-209ENST00000580222 TNFRSF1BP20333 461 aa17.12■□□□□ 0.33
LIMD2-209ENST00000580222 IDH2P48735 452 aaKnown RBP17.12■□□□□ 0.33
LIMD2-209ENST00000580222 COPZ1P61923 177 aa17.12■□□□□ 0.33
LIMD2-209ENST00000580222 HOXC5Q00444 222 aa17.12■□□□□ 0.33
LIMD2-209ENST00000580222 MS4A2Q01362 244 aa17.12■□□□□ 0.33
LIMD2-209ENST00000580222 FOXF1Q12946 379 aa17.12■□□□□ 0.33
LIMD2-209ENST00000580222 IFI44LQ53G44 452 aa17.12■□□□□ 0.33
LIMD2-209ENST00000580222 MTX3Q5HYI7 312 aa17.12■□□□□ 0.33
LIMD2-209ENST00000580222 FKBP9P1Q75LS8 142 aa17.12■□□□□ 0.33
LIMD2-209ENST00000580222 VTCN1Q7Z7D3 282 aa17.12■□□□□ 0.33
LIMD2-209ENST00000580222 CARM1Q86X55 608 aa17.12■□□□□ 0.33
LIMD2-209ENST00000580222 KBTBD8Q8NFY9 601 aa17.12■□□□□ 0.33
LIMD2-209ENST00000580222 TMEM234Q8WY98 164 aa17.12■□□□□ 0.33
LIMD2-209ENST00000580222 ST8SIA1Q92185 356 aa17.12■□□□□ 0.33
LIMD2-209ENST00000580222 ZBTB8AQ96BR9 441 aa17.12■□□□□ 0.33
LIMD2-209ENST00000580222 HS6ST2Q96MM7 605 aa17.12■□□□□ 0.33
LIMD2-209ENST00000580222 RHNO1Q9BSD3 238 aa17.12■□□□□ 0.33
LIMD2-209ENST00000580222 SHARPINQ9H0F6 387 aa17.12■□□□□ 0.33
LIMD2-209ENST00000580222 ESRP2Q9H6T0 727 aaKnown RBP17.12■□□□□ 0.33
LIMD2-209ENST00000580222 SLC7A8Q9UHI5 535 aa17.12■□□□□ 0.33
LIMD2-209ENST00000580222 TGP01266 2768 aa17.11■□□□□ 0.33
LIMD2-209ENST00000580222 OR2M5A3KFT3 312 aa17.11■□□□□ 0.33
LIMD2-209ENST00000580222 SHISA8B8ZZ34 492 aa17.11■□□□□ 0.33
LIMD2-209ENST00000580222 FAAHO00519 579 aa17.11■□□□□ 0.33
LIMD2-209ENST00000580222 NTN1O95631 604 aa17.11■□□□□ 0.33
LIMD2-209ENST00000580222 PRKCAP17252 672 aa17.11■□□□□ 0.33
LIMD2-209ENST00000580222 ACAA2P42765 397 aaKnown RBP17.11■□□□□ 0.33
LIMD2-209ENST00000580222 TRAP1Q12931 704 aaKnown RBP17.11■□□□□ 0.33
LIMD2-209ENST00000580222 FLOT2Q14254 428 aa17.11■□□□□ 0.33
LIMD2-209ENST00000580222 GLYR1Q49A26 553 aaPredicted RBP17.11■□□□□ 0.33
LIMD2-209ENST00000580222 CADM2Q8N3J6 435 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms