RNA–Protein interactions for RNA: ENST00000577241.1

MSI2-205, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-205	ENST00000577241	DNAJA1	P31689	397 aa	Known RBP	13.9	□□□□□ -0.18
MSI2-205	ENST00000577241	IFNA8	P32881	189 aa		13.9	□□□□□ -0.18
MSI2-205	ENST00000577241	P2RY4	P51582	365 aa		13.9	□□□□□ -0.18
MSI2-205	ENST00000577241	TGFBR3	Q03167	851 aa		13.9	□□□□□ -0.18
MSI2-205	ENST00000577241	LIPE	Q05469	1076 aa		13.9	□□□□□ -0.18
MSI2-205	ENST00000577241	OR7E24	Q6IFN5	339 aa		13.9	□□□□□ -0.18
MSI2-205	ENST00000577241	C8orf82	Q6P1X6	216 aa	Predicted RBP	13.9	□□□□□ -0.18
MSI2-205	ENST00000577241	LINC00114	Q6XXX2	140 aa		13.9	□□□□□ -0.18
MSI2-205	ENST00000577241	H1FNT	Q75WM6	255 aa	Predicted RBP	13.9	□□□□□ -0.18
MSI2-205	ENST00000577241	AAED1	Q7RTV5	226 aa		13.9	□□□□□ -0.18
MSI2-205	ENST00000577241	SCAI	Q8N9R8	606 aa		13.9	□□□□□ -0.18
MSI2-205	ENST00000577241	POMGNT2	Q8NAT1	580 aa		13.9	□□□□□ -0.18
MSI2-205	ENST00000577241	VANGL1	Q8TAA9	524 aa	Predicted RBP	13.9	□□□□□ -0.18
MSI2-205	ENST00000577241	TAAR8	Q969N4	342 aa		13.9	□□□□□ -0.18
MSI2-205	ENST00000577241	MUCL1	Q96DR8	90 aa		13.9	□□□□□ -0.18
MSI2-205	ENST00000577241	WFDC6	Q9BQY6	131 aa		13.9	□□□□□ -0.18
MSI2-205	ENST00000577241	SLC19A3	Q9BZV2	496 aa		13.9	□□□□□ -0.18
MSI2-205	ENST00000577241	TAS2R16	Q9NYV7	291 aa		13.9	□□□□□ -0.18
MSI2-205	ENST00000577241	ST6GALNAC2	Q9UJ37	374 aa		13.9	□□□□□ -0.18
MSI2-205	ENST00000577241	SH3GLB1	Q9Y371	365 aa		13.9	□□□□□ -0.18
MSI2-205	ENST00000577241	MPDZ	O75970	2070 aa		13.9	□□□□□ -0.18
MSI2-205	ENST00000577241	CIB4	A0PJX0	185 aa		13.89	□□□□□ -0.19
MSI2-205	ENST00000577241	CPSF4L	A6NMK7	179 aa	Known RBP	13.89	□□□□□ -0.19
MSI2-205	ENST00000577241	GSTA4	O15217	222 aa		13.89	□□□□□ -0.19
MSI2-205	ENST00000577241	THBD	P07204	575 aa		13.89	□□□□□ -0.19
MSI2-205	ENST00000577241	IGHV1-2	P23083	117 aa		13.89	□□□□□ -0.19
MSI2-205	ENST00000577241	DNASE1	P24855	282 aa		13.89	□□□□□ -0.19
MSI2-205	ENST00000577241	SLC7A2	P52569	658 aa		13.89	□□□□□ -0.19
MSI2-205	ENST00000577241	CRYBA2	P53672	197 aa		13.89	□□□□□ -0.19
MSI2-205	ENST00000577241	SELENOW	P63302	87 aa		13.89	□□□□□ -0.19
MSI2-205	ENST00000577241	NPTX1	Q15818	432 aa		13.89	□□□□□ -0.19
MSI2-205	ENST00000577241	LRRC23	Q53EV4	343 aa	Predicted RBP	13.89	□□□□□ -0.19
MSI2-205	ENST00000577241	CYBRD1	Q53TN4	286 aa		13.89	□□□□□ -0.19
MSI2-205	ENST00000577241	TIMM23B	Q5SRD1	257 aa		13.89	□□□□□ -0.19
MSI2-205	ENST00000577241	TTC33	Q6PID6	262 aa	Predicted RBP	13.89	□□□□□ -0.19
MSI2-205	ENST00000577241	CREB3L2	Q70SY1	520 aa		13.89	□□□□□ -0.19
MSI2-205	ENST00000577241	CARM1	Q86X55	608 aa		13.89	□□□□□ -0.19
MSI2-205	ENST00000577241	ANKS4B	Q8N8V4	417 aa		13.89	□□□□□ -0.19
MSI2-205	ENST00000577241	ZIC4	Q8N9L1	334 aa		13.89	□□□□□ -0.19
MSI2-205	ENST00000577241	PIK3IP1	Q96FE7	263 aa		13.89	□□□□□ -0.19
MSI2-205	ENST00000577241	OXGR1	Q96P68	337 aa		13.89	□□□□□ -0.19
MSI2-205	ENST00000577241	ASPN	Q9BXN1	380 aa		13.89	□□□□□ -0.19
MSI2-205	ENST00000577241	ALG2	Q9H553	416 aa		13.89	□□□□□ -0.19
MSI2-205	ENST00000577241	PLEKHF2	Q9H8W4	249 aa		13.89	□□□□□ -0.19
MSI2-205	ENST00000577241	SPAG4	Q9NPE6	437 aa		13.89	□□□□□ -0.19
MSI2-205	ENST00000577241	RCE1	Q9Y256	329 aa		13.89	□□□□□ -0.19
MSI2-205	ENST00000577241	LRBA	P50851	2863 aa		13.89	□□□□□ -0.19
MSI2-205	ENST00000577241	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	13.88	□□□□□ -0.19
MSI2-205	ENST00000577241	OR5H1	A6NKK0	313 aa		13.88	□□□□□ -0.19
MSI2-205	ENST00000577241		M0R082	166 aa		13.88	□□□□□ -0.19
MSI2-205	ENST00000577241	NME4	O00746	187 aa		13.88	□□□□□ -0.19
MSI2-205	ENST00000577241	KLF4	O43474	513 aa		13.88	□□□□□ -0.19
MSI2-205	ENST00000577241	AKAP8	O43823	692 aa	Known RBP	13.88	□□□□□ -0.19
MSI2-205	ENST00000577241	LYZL6	O75951	148 aa		13.88	□□□□□ -0.19
MSI2-205	ENST00000577241	IGHV3-9	P01782	118 aa		13.88	□□□□□ -0.19
MSI2-205	ENST00000577241	RAF1	P04049	648 aa		13.88	□□□□□ -0.19
MSI2-205	ENST00000577241	THRB	P10828	461 aa		13.88	□□□□□ -0.19
MSI2-205	ENST00000577241	NQO1	P15559	274 aa	Known RBP	13.88	□□□□□ -0.19
MSI2-205	ENST00000577241	GRPR	P30550	384 aa		13.88	□□□□□ -0.19
MSI2-205	ENST00000577241	NTF4	P34130	210 aa		13.88	□□□□□ -0.19
MSI2-205	ENST00000577241	FAP	Q12884	760 aa		13.88	□□□□□ -0.19
MSI2-205	ENST00000577241	C1D	Q13901	141 aa	Known RBP	13.88	□□□□□ -0.19
MSI2-205	ENST00000577241	TAB1	Q15750	504 aa		13.88	□□□□□ -0.19
MSI2-205	ENST00000577241	PAMR1	Q6UXH9	720 aa		13.88	□□□□□ -0.19
MSI2-205	ENST00000577241	C22orf34	Q6ZV56	151 aa		13.88	□□□□□ -0.19
MSI2-205	ENST00000577241	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	13.88	□□□□□ -0.19
MSI2-205	ENST00000577241	WFDC8	Q8IUA0	241 aa		13.88	□□□□□ -0.19
MSI2-205	ENST00000577241	RBM45	Q8IUH3	476 aa	Known RBP	13.88	□□□□□ -0.19
MSI2-205	ENST00000577241	ZNF433	Q8N7K0	673 aa	Predicted RBP	13.88	□□□□□ -0.19
MSI2-205	ENST00000577241	C1orf162	Q8NEQ5	155 aa	Predicted RBP	13.88	□□□□□ -0.19
MSI2-205	ENST00000577241	OR4D11	Q8NGI4	311 aa		13.88	□□□□□ -0.19
MSI2-205	ENST00000577241	ZNF417	Q8TAU3	575 aa		13.88	□□□□□ -0.19
MSI2-205	ENST00000577241	SLC41A3	Q96GZ6	507 aa		13.88	□□□□□ -0.19
MSI2-205	ENST00000577241	ZNF385A	Q96PM9	386 aa	Known RBP	13.88	□□□□□ -0.19
MSI2-205	ENST00000577241	ZNF587	Q96SQ5	575 aa	Predicted RBP	13.88	□□□□□ -0.19
MSI2-205	ENST00000577241	SLCO5A1	Q9H2Y9	848 aa		13.88	□□□□□ -0.19
MSI2-205	ENST00000577241	ESRP2	Q9H6T0	727 aa	Known RBP	13.88	□□□□□ -0.19
MSI2-205	ENST00000577241	ABCD2	Q9UBJ2	740 aa		13.88	□□□□□ -0.19
MSI2-205	ENST00000577241	USP22	Q9UPT9	525 aa		13.88	□□□□□ -0.19
MSI2-205	ENST00000577241	CXCR6	O00574	342 aa		13.87	□□□□□ -0.19
MSI2-205	ENST00000577241	SIAH2	O43255	324 aa		13.87	□□□□□ -0.19
MSI2-205	ENST00000577241	KRT33A	O76009	404 aa		13.87	□□□□□ -0.19
MSI2-205	ENST00000577241	OR5F1	O95221	314 aa		13.87	□□□□□ -0.19
MSI2-205	ENST00000577241	EDNRA	P25101	427 aa		13.87	□□□□□ -0.19
MSI2-205	ENST00000577241	MPG	P29372	298 aa		13.87	□□□□□ -0.19
MSI2-205	ENST00000577241	RBM34	P42696	430 aa	Known RBP	13.87	□□□□□ -0.19
MSI2-205	ENST00000577241	GSK3B	P49841	420 aa		13.87	□□□□□ -0.19
MSI2-205	ENST00000577241	MNAT1	P51948	309 aa		13.87	□□□□□ -0.19
MSI2-205	ENST00000577241	TAS2R41	P59536	307 aa		13.87	□□□□□ -0.19
MSI2-205	ENST00000577241	PSME3	P61289	254 aa		13.87	□□□□□ -0.19
MSI2-205	ENST00000577241	KEAP1	Q14145	624 aa		13.87	□□□□□ -0.19
MSI2-205	ENST00000577241	TSPO2	Q5TGU0	170 aa		13.87	□□□□□ -0.19
MSI2-205	ENST00000577241	GKAP1	Q5VSY0	366 aa	Predicted RBP	13.87	□□□□□ -0.19
MSI2-205	ENST00000577241	C17orf78	Q8N4C9	275 aa		13.87	□□□□□ -0.19
MSI2-205	ENST00000577241	C10orf53	Q8N6V4	93 aa		13.87	□□□□□ -0.19
MSI2-205	ENST00000577241	MUS81	Q96NY9	551 aa		13.87	□□□□□ -0.19
MSI2-205	ENST00000577241	KCTD14	Q9BQ13	255 aa	Predicted RBP	13.87	□□□□□ -0.19
MSI2-205	ENST00000577241	SLC7A10	Q9NS82	523 aa		13.87	□□□□□ -0.19
MSI2-205	ENST00000577241	NDE1	Q9NXR1	346 aa		13.87	□□□□□ -0.19
MSI2-205	ENST00000577241	MRPL39	Q9NYK5	338 aa	Known RBP	13.87	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms