RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 CHEK1O14757 476 aa3.75□□□□□ -1.81
NUP88-213ENST00000576862 ZNF264O43296 627 aa3.75□□□□□ -1.81
NUP88-213ENST00000576862 GJB5O95377 273 aa3.75□□□□□ -1.81
NUP88-213ENST00000576862 SNAI1O95863 264 aaPredicted RBP3.75□□□□□ -1.81
NUP88-213ENST00000576862 KRT6AP02538 564 aa3.75□□□□□ -1.81
NUP88-213ENST00000576862 MSR1P21757 451 aa3.75□□□□□ -1.81
NUP88-213ENST00000576862 DRD5P21918 477 aa3.75□□□□□ -1.81
NUP88-213ENST00000576862 CMA1P23946 247 aa3.75□□□□□ -1.81
NUP88-213ENST00000576862 CYP2F1P24903 491 aa3.75□□□□□ -1.81
NUP88-213ENST00000576862 MSNP26038 577 aaKnown RBP3.75□□□□□ -1.81
NUP88-213ENST00000576862 RORAP35398 523 aa3.75□□□□□ -1.81
NUP88-213ENST00000576862 MAGEA9P43362 315 aa3.75□□□□□ -1.81
NUP88-213ENST00000576862 CEBPDP49716 269 aaPredicted RBP3.75□□□□□ -1.81
NUP88-213ENST00000576862 SRP54P61011 504 aaKnown RBP3.75□□□□□ -1.81
NUP88-213ENST00000576862 SLC10A1Q14973 349 aa3.75□□□□□ -1.81
NUP88-213ENST00000576862 HNRNPA1L2Q32P51 320 aaKnown RBP3.75□□□□□ -1.81
NUP88-213ENST00000576862 RESP18Q5W5W9 173 aa3.75□□□□□ -1.81
NUP88-213ENST00000576862 SASS6Q6UVJ0 657 aa3.75□□□□□ -1.81
NUP88-213ENST00000576862 ATRAIDQ6UW56 229 aa3.75□□□□□ -1.81
NUP88-213ENST00000576862 PAQR9Q6ZVX9 377 aa3.75□□□□□ -1.81
NUP88-213ENST00000576862 CDR2LQ86X02 465 aaPredicted RBP3.75□□□□□ -1.81
NUP88-213ENST00000576862 RNF148Q8N7C7 305 aa3.75□□□□□ -1.81
NUP88-213ENST00000576862 FAM71CQ8NEG0 241 aa3.75□□□□□ -1.81
NUP88-213ENST00000576862 TMEM185AQ8NFB2 350 aa3.75□□□□□ -1.81
NUP88-213ENST00000576862 OR8J1Q8NGP2 316 aa3.75□□□□□ -1.81
NUP88-213ENST00000576862 CDC26Q8NHZ8 85 aa3.75□□□□□ -1.81
NUP88-213ENST00000576862 DQX1Q8TE96 717 aaKnown RBP3.75□□□□□ -1.81
NUP88-213ENST00000576862 CCDC12Q8WUD4 166 aaPredicted RBP3.75□□□□□ -1.81
NUP88-213ENST00000576862 CHP1Q99653 195 aa3.75□□□□□ -1.81
NUP88-213ENST00000576862 ACBD6Q9BR61 282 aa3.75□□□□□ -1.81
NUP88-213ENST00000576862 FRMD8P1Q9BZ68 369 aaPredicted RBP3.75□□□□□ -1.81
NUP88-213ENST00000576862 HDHD2Q9H0R4 259 aa3.75□□□□□ -1.81
NUP88-213ENST00000576862 DNTTIP1Q9H147 329 aa3.75□□□□□ -1.81
NUP88-213ENST00000576862 OR52A5Q9H2C5 316 aa3.75□□□□□ -1.81
NUP88-213ENST00000576862 CYP3A43Q9HB55 503 aa3.75□□□□□ -1.81
NUP88-213ENST00000576862 TIGARQ9NQ88 270 aa3.75□□□□□ -1.81
NUP88-213ENST00000576862 ERVK-18Q9QC07 812 aa3.75□□□□□ -1.81
NUP88-213ENST00000576862 UXTQ9UBK9 157 aaPredicted RBP3.75□□□□□ -1.81
NUP88-213ENST00000576862 HMGXB4Q9UGU5 601 aa3.75□□□□□ -1.81
NUP88-213ENST00000576862 AK9Q5TCS8 1911 aa3.75□□□□□ -1.81
NUP88-213ENST00000576862 GABRR3A8MPY1 467 aa3.74□□□□□ -1.81
NUP88-213ENST00000576862 TLR4O00206 839 aa3.74□□□□□ -1.81
NUP88-213ENST00000576862 DNAJB6O75190 326 aa3.74□□□□□ -1.81
NUP88-213ENST00000576862 GLAP06280 429 aa3.74□□□□□ -1.81
NUP88-213ENST00000576862 SLC35E2P0CK97 266 aa3.74□□□□□ -1.81
NUP88-213ENST00000576862 SLC2A3P11169 496 aa3.74□□□□□ -1.81
NUP88-213ENST00000576862 PVRP15151 417 aa3.74□□□□□ -1.81
NUP88-213ENST00000576862 TNNI3P19429 210 aa3.74□□□□□ -1.81
NUP88-213ENST00000576862 NSFP46459 744 aaKnown RBP3.74□□□□□ -1.81
NUP88-213ENST00000576862 POU3F4P49335 361 aa3.74□□□□□ -1.81
NUP88-213ENST00000576862 GTF2A1P52655 376 aaPredicted RBP3.74□□□□□ -1.81
NUP88-213ENST00000576862 NAPAP54920 295 aa3.74□□□□□ -1.81
NUP88-213ENST00000576862 YWHAEP62258 255 aaKnown RBP3.74□□□□□ -1.81
NUP88-213ENST00000576862 IL17AQ16552 155 aa3.74□□□□□ -1.81
NUP88-213ENST00000576862 MAPK6Q16659 721 aa3.74□□□□□ -1.81
NUP88-213ENST00000576862 DDX60LQ5H9U9 1706 aaKnown RBP3.74□□□□□ -1.81
NUP88-213ENST00000576862 FKBP1CQ5VVH2 108 aa3.74□□□□□ -1.81
NUP88-213ENST00000576862 PRAMEF7Q5VXH5 474 aa3.74□□□□□ -1.81
NUP88-213ENST00000576862 HIST2H2AA3Q6FI13 130 aa3.74□□□□□ -1.81
NUP88-213ENST00000576862 DLEU7Q6UYE1 221 aa3.74□□□□□ -1.81
NUP88-213ENST00000576862 TMEM179Q6ZVK1 233 aa3.74□□□□□ -1.81
NUP88-213ENST00000576862 BHLHA15Q7RTS1 189 aaPredicted RBP3.74□□□□□ -1.81
NUP88-213ENST00000576862 VTCN1Q7Z7D3 282 aa3.74□□□□□ -1.81
NUP88-213ENST00000576862 OFCC1Q8IZS5 231 aa3.74□□□□□ -1.81
NUP88-213ENST00000576862 BLIDQ8IZY5 108 aa3.74□□□□□ -1.81
NUP88-213ENST00000576862 OR52B4Q8NGK2 314 aa3.74□□□□□ -1.81
NUP88-213ENST00000576862 CCDC26Q8TAB7 109 aa3.74□□□□□ -1.81
NUP88-213ENST00000576862 CD300LFQ8TDQ1 290 aa3.74□□□□□ -1.81
NUP88-213ENST00000576862 FAM151AQ8WW52 585 aa3.74□□□□□ -1.81
NUP88-213ENST00000576862 ASZ1Q8WWH4 475 aa3.74□□□□□ -1.81
NUP88-213ENST00000576862 SLCO4A1Q96BD0 722 aa3.74□□□□□ -1.81
NUP88-213ENST00000576862 HAVCR1Q96D42 359 aa3.74□□□□□ -1.81
NUP88-213ENST00000576862 CHMP6Q96FZ7 201 aa3.74□□□□□ -1.81
NUP88-213ENST00000576862 VSIG2Q96IQ7 327 aa3.74□□□□□ -1.81
NUP88-213ENST00000576862 ELMO2Q96JJ3 720 aa3.74□□□□□ -1.81
NUP88-213ENST00000576862 SENP8Q96LD8 212 aa3.74□□□□□ -1.81
NUP88-213ENST00000576862 C9orf16Q9BUW7 83 aa3.74□□□□□ -1.81
NUP88-213ENST00000576862 NUP58Q9BVL2 599 aa3.74□□□□□ -1.81
NUP88-213ENST00000576862 RHBGQ9H310 441 aa3.74□□□□□ -1.81
NUP88-213ENST00000576862 COG4Q9H9E3 785 aa3.74□□□□□ -1.81
NUP88-213ENST00000576862 NEK6Q9HC98 313 aa3.74□□□□□ -1.81
NUP88-213ENST00000576862 VAT1LQ9HCJ6 419 aa3.74□□□□□ -1.81
NUP88-213ENST00000576862 KIAA1551Q9HCM1 1747 aa3.74□□□□□ -1.81
NUP88-213ENST00000576862 MYOZ2Q9NPC6 264 aa3.74□□□□□ -1.81
NUP88-213ENST00000576862 ESM1Q9NQ30 184 aa3.74□□□□□ -1.81
NUP88-213ENST00000576862 NYAP2Q9P242 653 aa3.74□□□□□ -1.81
NUP88-213ENST00000576862 CLEC4EQ9ULY5 219 aa3.74□□□□□ -1.81
NUP88-213ENST00000576862 PLA2G4CQ9UP65 541 aa3.74□□□□□ -1.81
NUP88-213ENST00000576862 MGAT4BQ9UQ53 548 aa3.74□□□□□ -1.81
NUP88-213ENST00000576862 RNF115Q9Y4L5 304 aa3.74□□□□□ -1.81
NUP88-213ENST00000576862 LAMA4Q16363 1823 aa3.73□□□□□ -1.81
NUP88-213ENST00000576862 SLX4Q8IY92 1834 aa3.73□□□□□ -1.81
NUP88-213ENST00000576862 ESYT2A0FGR8 921 aa3.73□□□□□ -1.81
NUP88-213ENST00000576862 MBLAC1A4D2B0 266 aaPredicted RBP3.73□□□□□ -1.81
NUP88-213ENST00000576862 SMCO2A6NFE2 343 aa3.73□□□□□ -1.81
NUP88-213ENST00000576862 OR5K4A6NMS3 321 aa3.73□□□□□ -1.81
NUP88-213ENST00000576862 A8MX80 341 aa3.73□□□□□ -1.81
NUP88-213ENST00000576862 E7ENQ6 273 aa3.73□□□□□ -1.81
NUP88-213ENST00000576862 E9PMD0 336 aa3.73□□□□□ -1.81
NUP88-213ENST00000576862 F5H6K3 240 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms