RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 LYVE1Q9Y5Y7 322 aa7.65□□□□□ -1.18
NUP88-211ENST00000575976 KIAA1549Q9HCM3 1950 aa7.64□□□□□ -1.19
NUP88-211ENST00000575976 SH3PXD2BA1X283 911 aa7.64□□□□□ -1.19
NUP88-211ENST00000575976 M0R082 166 aa7.64□□□□□ -1.19
NUP88-211ENST00000575976 GNGT2O14610 69 aa7.64□□□□□ -1.19
NUP88-211ENST00000575976 EIF1BO60739 113 aaKnown RBP7.64□□□□□ -1.19
NUP88-211ENST00000575976 CYTIPO60759 359 aa7.64□□□□□ -1.19
NUP88-211ENST00000575976 ENTPD5O75356 428 aa7.64□□□□□ -1.19
NUP88-211ENST00000575976 KRT36O76013 467 aa7.64□□□□□ -1.19
NUP88-211ENST00000575976 OR7A10O76100 309 aa7.64□□□□□ -1.19
NUP88-211ENST00000575976 RCBTB2O95199 551 aa7.64□□□□□ -1.19
NUP88-211ENST00000575976 MT-ATP6P00846 226 aa7.64□□□□□ -1.19
NUP88-211ENST00000575976 IGF2P01344 180 aa7.64□□□□□ -1.19
NUP88-211ENST00000575976 IL2RAP01589 272 aa7.64□□□□□ -1.19
NUP88-211ENST00000575976 FUT1P19526 365 aa7.64□□□□□ -1.19
NUP88-211ENST00000575976 MAKP20794 623 aa7.64□□□□□ -1.19
NUP88-211ENST00000575976 GTF2E2P29084 291 aaKnown RBP7.64□□□□□ -1.19
NUP88-211ENST00000575976 CEACAM8P31997 349 aaPredicted RBP7.64□□□□□ -1.19
NUP88-211ENST00000575976 P2RY4P51582 365 aa7.64□□□□□ -1.19
NUP88-211ENST00000575976 IST1P53990 364 aa7.64□□□□□ -1.19
NUP88-211ENST00000575976 CTBP2P56545 445 aa7.64□□□□□ -1.19
NUP88-211ENST00000575976 ADORA2A-AS1P86434 159 aa7.64□□□□□ -1.19
NUP88-211ENST00000575976 FOXF2Q12947 444 aa7.64□□□□□ -1.19
NUP88-211ENST00000575976 LAPTM4AQ15012 233 aa7.64□□□□□ -1.19
NUP88-211ENST00000575976 PAQR6Q6TCH4 344 aa7.64□□□□□ -1.19
NUP88-211ENST00000575976 MAMDC2Q7Z304 686 aaPredicted RBP7.64□□□□□ -1.19
NUP88-211ENST00000575976 GCNT2Q8N0V5 402 aa7.64□□□□□ -1.19
NUP88-211ENST00000575976 SLC43A2Q8N370 569 aa7.64□□□□□ -1.19
NUP88-211ENST00000575976 KDM8Q8N371 416 aa7.64□□□□□ -1.19
NUP88-211ENST00000575976 NAXEQ8NCW5 288 aa7.64□□□□□ -1.19
NUP88-211ENST00000575976 OR4K5Q8NGD3 323 aa7.64□□□□□ -1.19
NUP88-211ENST00000575976 ZNF417Q8TAU3 575 aa7.64□□□□□ -1.19
NUP88-211ENST00000575976 RNF128Q8TEB7 428 aa7.64□□□□□ -1.19
NUP88-211ENST00000575976 RND1Q92730 232 aa7.64□□□□□ -1.19
NUP88-211ENST00000575976 INTS12Q96CB8 462 aaKnown RBP7.64□□□□□ -1.19
NUP88-211ENST00000575976 BPIFA2Q96DR5 249 aa7.64□□□□□ -1.19
NUP88-211ENST00000575976 CCDC120Q96HB5 630 aa7.64□□□□□ -1.19
NUP88-211ENST00000575976 ZNF587Q96SQ5 575 aaPredicted RBP7.64□□□□□ -1.19
NUP88-211ENST00000575976 TM9SF2Q99805 663 aa7.64□□□□□ -1.19
NUP88-211ENST00000575976 PSD2Q9BQI7 771 aa7.64□□□□□ -1.19
NUP88-211ENST00000575976 KLHL4Q9C0H6 718 aa7.64□□□□□ -1.19
NUP88-211ENST00000575976 FKRPQ9H9S5 495 aa7.64□□□□□ -1.19
NUP88-211ENST00000575976 C6orf203Q9P0P8 240 aaPredicted RBP7.64□□□□□ -1.19
NUP88-211ENST00000575976 ERRFI1Q9UJM3 462 aaPredicted RBP7.64□□□□□ -1.19
NUP88-211ENST00000575976 TMCC3Q9ULS5 477 aa7.64□□□□□ -1.19
NUP88-211ENST00000575976 SLC5A6Q9Y289 635 aa7.64□□□□□ -1.19
NUP88-211ENST00000575976 SAMHD1Q9Y3Z3 626 aaKnown RBP7.64□□□□□ -1.19
NUP88-211ENST00000575976 U3KQV3 271 aa7.64□□□□□ -1.19
NUP88-211ENST00000575976 SPENQ96T58 3664 aaKnown RBP7.63□□□□□ -1.19
NUP88-211ENST00000575976 A0A0G2JNJ9 132 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 HTR3EA5X5Y0 456 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 AQP7P3A6NL99 342 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 ZNF716A6NP11 495 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 MS4A18H0YCH9 400 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 H3BNX3 289 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 CLOCKO15516 846 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 HNRNPRO43390 633 aaKnown RBP7.63□□□□□ -1.19
NUP88-211ENST00000575976 OR10H3O60404 316 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 CCNB2O95067 398 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 LDLRP01130 860 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 ASAH2BP0C7U1 165 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 TMIGD3P0DMS9 266 aaPredicted RBP7.63□□□□□ -1.19
NUP88-211ENST00000575976 FCGR2AP12318 317 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 FASP25445 335 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 GPR4P46093 362 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 OMPP47874 163 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 PER3P56645 1201 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 SIRPAP78324 504 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 RASGEF1BQ0VAM2 473 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 PMS2P3Q13401 168 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 MFSD13AQ14CX5 517 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 MS4A18Q3C1V0 323 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 GTF2IRD2BQ6EKJ0 949 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 TMEM225Q6GV28 225 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 ABLIM2Q6H8Q1 611 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 OR2A2Q6IF42 318 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 HMBOX1Q6NT76 420 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 TMPRSS11FQ6ZWK6 438 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 H1FNTQ75WM6 255 aaPredicted RBP7.63□□□□□ -1.19
NUP88-211ENST00000575976 ZNF771Q7L3S4 317 aaPredicted RBP7.63□□□□□ -1.19
NUP88-211ENST00000575976 ZER1Q7Z7L7 766 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 TMEM179BQ7Z7N9 219 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 AMIGO2Q86SJ2 522 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 GTF2IRD2Q86UP8 949 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 CCDC71Q8IV32 467 aaPredicted RBP7.63□□□□□ -1.19
NUP88-211ENST00000575976 LIX1LQ8IVB5 337 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 MCEMP1Q8IX19 187 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 TUSC5Q8IXB3 177 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 CDK20Q8IZL9 346 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 OR9Q2Q8NGE9 314 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 OR5J2Q8NH18 312 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 PIGXQ8TBF5 258 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 LIPHQ8WWY8 451 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 LRTOMTQ8WZ04 291 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 ZNF775Q96BV0 537 aaPredicted RBP7.63□□□□□ -1.19
NUP88-211ENST00000575976 FAM46AQ96IP4 442 aaKnown RBP7.63□□□□□ -1.19
NUP88-211ENST00000575976 GPA33Q99795 319 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 ASPNQ9BXN1 380 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 NTN4Q9HB63 628 aa7.63□□□□□ -1.19
NUP88-211ENST00000575976 S100A14Q9HCY8 104 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms