RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 ARF1P84077 181 aaKnown RBP13.96□□□□□ -0.17
CTDNEP1-211ENST00000575783 ROR2Q01974 943 aaKnown RBP13.96□□□□□ -0.17
CTDNEP1-211ENST00000575783 MVKQ03426 396 aa13.96□□□□□ -0.17
CTDNEP1-211ENST00000575783 ARHGAP11BQ3KRB8 267 aa13.96□□□□□ -0.17
CTDNEP1-211ENST00000575783 AVPI1Q5T686 147 aa13.96□□□□□ -0.17
CTDNEP1-211ENST00000575783 REP15Q6BDI9 236 aa13.96□□□□□ -0.17
CTDNEP1-211ENST00000575783 GSPT2Q8IYD1 628 aaKnown RBP13.96□□□□□ -0.17
CTDNEP1-211ENST00000575783 IL17RDQ8NFM7 739 aa13.96□□□□□ -0.17
CTDNEP1-211ENST00000575783 TAF15Q92804 592 aaKnown RBP eCLIP13.96□□□□□ -0.17
CTDNEP1-211ENST00000575783 ZG16BQ96DA0 208 aa13.96□□□□□ -0.17
CTDNEP1-211ENST00000575783 CCDC126Q96EE4 140 aa13.96□□□□□ -0.17
CTDNEP1-211ENST00000575783 ZNF416Q9BWM5 594 aa13.96□□□□□ -0.17
CTDNEP1-211ENST00000575783 ZNF350Q9GZX5 532 aa13.96□□□□□ -0.17
CTDNEP1-211ENST00000575783 C7orf69Q9H7B7 122 aa13.96□□□□□ -0.17
CTDNEP1-211ENST00000575783 ZDHHC2Q9UIJ5 367 aa13.96□□□□□ -0.17
CTDNEP1-211ENST00000575783 TMED5Q9Y3A6 229 aa13.96□□□□□ -0.17
CTDNEP1-211ENST00000575783 ZNF503-AS2A6NEH8 195 aa13.95□□□□□ -0.18
CTDNEP1-211ENST00000575783 AQP7P3A6NL99 342 aa13.95□□□□□ -0.18
CTDNEP1-211ENST00000575783 TMEM229AB2RXF0 380 aa13.95□□□□□ -0.18
CTDNEP1-211ENST00000575783 G3V2L1 256 aa13.95□□□□□ -0.18
CTDNEP1-211ENST00000575783 LSM1O15116 133 aaKnown RBP13.95□□□□□ -0.18
CTDNEP1-211ENST00000575783 CDC14BO60729 498 aa13.95□□□□□ -0.18
CTDNEP1-211ENST00000575783 GSNP06396 782 aa13.95□□□□□ -0.18
CTDNEP1-211ENST00000575783 RPL3P39023 403 aaKnown RBP13.95□□□□□ -0.18
CTDNEP1-211ENST00000575783 FAM153CQ494X1 144 aa13.95□□□□□ -0.18
CTDNEP1-211ENST00000575783 CREB3L2Q70SY1 520 aa13.95□□□□□ -0.18
CTDNEP1-211ENST00000575783 C6orf120Q7Z4R8 191 aa13.95□□□□□ -0.18
CTDNEP1-211ENST00000575783 MDP1Q86V88 176 aa13.95□□□□□ -0.18
CTDNEP1-211ENST00000575783 LRP11Q86VZ4 500 aa13.95□□□□□ -0.18
CTDNEP1-211ENST00000575783 RELL1Q8IUW5 271 aa13.95□□□□□ -0.18
CTDNEP1-211ENST00000575783 TUBB1Q9H4B7 451 aa13.95□□□□□ -0.18
CTDNEP1-211ENST00000575783 ATAD3AQ9NVI7 634 aa13.95□□□□□ -0.18
CTDNEP1-211ENST00000575783 ADPRHL2Q9NX46 363 aa13.95□□□□□ -0.18
CTDNEP1-211ENST00000575783 FZR1Q9UM11 496 aa13.95□□□□□ -0.18
CTDNEP1-211ENST00000575783 NOX1Q9Y5S8 564 aa13.95□□□□□ -0.18
CTDNEP1-211ENST00000575783 LIPT2A6NK58 231 aa13.94□□□□□ -0.18
CTDNEP1-211ENST00000575783 AZIN1O14977 448 aa13.94□□□□□ -0.18
CTDNEP1-211ENST00000575783 NCR1O76036 304 aa13.94□□□□□ -0.18
CTDNEP1-211ENST00000575783 NAT2P11245 290 aa13.94□□□□□ -0.18
CTDNEP1-211ENST00000575783 NEFHP12036 1026 aa13.94□□□□□ -0.18
CTDNEP1-211ENST00000575783 SH3BGRP55822 239 aaPredicted RBP13.94□□□□□ -0.18
CTDNEP1-211ENST00000575783 KCNJ10P78508 379 aa13.94□□□□□ -0.18
CTDNEP1-211ENST00000575783 IL13RA1P78552 427 aa13.94□□□□□ -0.18
CTDNEP1-211ENST00000575783 TYW3Q6IPR3 259 aaKnown RBP13.94□□□□□ -0.18
CTDNEP1-211ENST00000575783 ZYG11AQ6WRX3 759 aa13.94□□□□□ -0.18
CTDNEP1-211ENST00000575783 CNOT9Q92600 299 aaKnown RBP13.94□□□□□ -0.18
CTDNEP1-211ENST00000575783 DVL3Q92997 716 aaPredicted RBP13.94□□□□□ -0.18
CTDNEP1-211ENST00000575783 LRRC58Q96CX6 371 aa13.94□□□□□ -0.18
CTDNEP1-211ENST00000575783 PKP2Q99959 881 aa13.94□□□□□ -0.18
CTDNEP1-211ENST00000575783 PIF1Q9H611 641 aa13.94□□□□□ -0.18
CTDNEP1-211ENST00000575783 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.94□□□□□ -0.18
CTDNEP1-211ENST00000575783 EXD2Q9NVH0 621 aa13.94□□□□□ -0.18
CTDNEP1-211ENST00000575783 WDR45Q9Y484 360 aa13.94□□□□□ -0.18
CTDNEP1-211ENST00000575783 EXOC1LA0A1B0GW35 172 aa13.93□□□□□ -0.18
CTDNEP1-211ENST00000575783 DNAJC9-AS1A6NH13 148 aa13.93□□□□□ -0.18
CTDNEP1-211ENST00000575783 TMEM114B3SHH9 223 aa13.93□□□□□ -0.18
CTDNEP1-211ENST00000575783 RP2O75695 350 aa13.93□□□□□ -0.18
CTDNEP1-211ENST00000575783 OR12D1P0DN82 309 aa13.93□□□□□ -0.18
CTDNEP1-211ENST00000575783 NAA20P61599 178 aa13.93□□□□□ -0.18
CTDNEP1-211ENST00000575783 HBA1P69905 142 aa13.93□□□□□ -0.18
CTDNEP1-211ENST00000575783 MRPS11P82912 194 aaKnown RBP13.93□□□□□ -0.18
CTDNEP1-211ENST00000575783 BAMBIQ13145 260 aa13.93□□□□□ -0.18
CTDNEP1-211ENST00000575783 PTGR1Q14914 329 aa13.93□□□□□ -0.18
CTDNEP1-211ENST00000575783 ALKBH6Q3KRA9 238 aa13.93□□□□□ -0.18
CTDNEP1-211ENST00000575783 GKAP1Q5VSY0 366 aaPredicted RBP13.93□□□□□ -0.18
CTDNEP1-211ENST00000575783 EPHX4Q8IUS5 362 aa13.93□□□□□ -0.18
CTDNEP1-211ENST00000575783 DDIASQ8IXT1 998 aa13.93□□□□□ -0.18
CTDNEP1-211ENST00000575783 KRTCAP2Q8N6L1 136 aa13.93□□□□□ -0.18
CTDNEP1-211ENST00000575783 XAGE5Q8WWM1 108 aa13.93□□□□□ -0.18
CTDNEP1-211ENST00000575783 RAB39BQ96DA2 213 aa13.93□□□□□ -0.18
CTDNEP1-211ENST00000575783 MS4A3Q96HJ5 214 aa13.93□□□□□ -0.18
CTDNEP1-211ENST00000575783 SLC35G5Q96KT7 338 aa13.93□□□□□ -0.18
CTDNEP1-211ENST00000575783 OR51I1Q9H343 314 aa13.93□□□□□ -0.18
CTDNEP1-211ENST00000575783 KCNF1Q9H3M0 494 aa13.93□□□□□ -0.18
CTDNEP1-211ENST00000575783 EXOSC3Q9NQT5 275 aaKnown RBP13.93□□□□□ -0.18
CTDNEP1-211ENST00000575783 MYEF2Q9P2K5 600 aaKnown RBP13.93□□□□□ -0.18
CTDNEP1-211ENST00000575783 GIMAP2Q9UG22 337 aa13.93□□□□□ -0.18
CTDNEP1-211ENST00000575783 OPN4Q9UHM6 478 aa13.93□□□□□ -0.18
CTDNEP1-211ENST00000575783 DUSP13Q9UII6 198 aa13.93□□□□□ -0.18
CTDNEP1-211ENST00000575783 EMCNQ9ULC0 261 aa13.93□□□□□ -0.18
CTDNEP1-211ENST00000575783 A0A087WUV0 522 aaPredicted RBP13.92□□□□□ -0.18
CTDNEP1-211ENST00000575783 SEC14L2O76054 403 aa13.92□□□□□ -0.18
CTDNEP1-211ENST00000575783 CHEK2O96017 543 aa13.92□□□□□ -0.18
CTDNEP1-211ENST00000575783 CXCR1P25024 350 aa13.92□□□□□ -0.18
CTDNEP1-211ENST00000575783 ETF1P62495 437 aaKnown RBP13.92□□□□□ -0.18
CTDNEP1-211ENST00000575783 PLAURQ03405 335 aa13.92□□□□□ -0.18
CTDNEP1-211ENST00000575783 GLIPR1L2Q4G1C9 344 aa13.92□□□□□ -0.18
CTDNEP1-211ENST00000575783 ATAD3BQ5T9A4 648 aa13.92□□□□□ -0.18
CTDNEP1-211ENST00000575783 ZNF771Q7L3S4 317 aaPredicted RBP13.92□□□□□ -0.18
CTDNEP1-211ENST00000575783 TREML1Q86YW5 311 aa13.92□□□□□ -0.18
CTDNEP1-211ENST00000575783 NATD1Q8N6N6 113 aa13.92□□□□□ -0.18
CTDNEP1-211ENST00000575783 KIF18AQ8NI77 898 aa13.92□□□□□ -0.18
CTDNEP1-211ENST00000575783 RAB8BQ92930 207 aa13.92□□□□□ -0.18
CTDNEP1-211ENST00000575783 COQ8BQ96D53 544 aa13.92□□□□□ -0.18
CTDNEP1-211ENST00000575783 PRPF18Q99633 342 aaKnown RBP13.92□□□□□ -0.18
CTDNEP1-211ENST00000575783 TAPBPLQ9BX59 468 aa13.92□□□□□ -0.18
CTDNEP1-211ENST00000575783 LINC00470Q9BZP3 86 aa13.92□□□□□ -0.18
CTDNEP1-211ENST00000575783 SLITRK2Q9H156 845 aa13.92□□□□□ -0.18
CTDNEP1-211ENST00000575783 DCDC2Q9UHG0 476 aa13.92□□□□□ -0.18
CTDNEP1-211ENST00000575783 A0A1W2PPW3 197 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms