RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 C1orf229Q6ZS94 237 aaPredicted RBP8.6□□□□□ -1.03
CALCOCO2-227ENST00000575560 HMGN2P46Q86SG4 172 aa8.6□□□□□ -1.03
CALCOCO2-227ENST00000575560 GPAT4Q86UL3 456 aa8.6□□□□□ -1.03
CALCOCO2-227ENST00000575560 CARM1Q86X55 608 aa8.6□□□□□ -1.03
CALCOCO2-227ENST00000575560 CMIPQ8IY22 773 aa8.6□□□□□ -1.03
CALCOCO2-227ENST00000575560 FNDC5Q8NAU1 212 aa8.6□□□□□ -1.03
CALCOCO2-227ENST00000575560 ANKK1Q8NFD2 765 aa8.6□□□□□ -1.03
CALCOCO2-227ENST00000575560 CLDND2Q8NHS1 167 aa8.6□□□□□ -1.03
CALCOCO2-227ENST00000575560 CKAP2Q8WWK9 683 aa8.6□□□□□ -1.03
CALCOCO2-227ENST00000575560 LINC00470Q9BZP3 86 aa8.6□□□□□ -1.03
CALCOCO2-227ENST00000575560 PRDM4Q9UKN5 801 aa8.6□□□□□ -1.03
CALCOCO2-227ENST00000575560 IGHV2OR16-5A0A0B4J2B6 119 aa8.59□□□□□ -1.03
CALCOCO2-227ENST00000575560 ZNF503-AS2A6NEH8 195 aa8.59□□□□□ -1.03
CALCOCO2-227ENST00000575560 AGAP5A6NIR3 686 aa8.59□□□□□ -1.03
CALCOCO2-227ENST00000575560 COPEO14579 308 aa8.59□□□□□ -1.03
CALCOCO2-227ENST00000575560 WNT9BO14905 357 aa8.59□□□□□ -1.03
CALCOCO2-227ENST00000575560 NPHS1O60500 1241 aa8.59□□□□□ -1.03
CALCOCO2-227ENST00000575560 RGS9O75916 674 aaPredicted RBP8.59□□□□□ -1.03
CALCOCO2-227ENST00000575560 VAMP5O95183 116 aa8.59□□□□□ -1.03
CALCOCO2-227ENST00000575560 AVPP01185 164 aa8.59□□□□□ -1.03
CALCOCO2-227ENST00000575560 FAM153BP0C7A2 387 aa8.59□□□□□ -1.03
CALCOCO2-227ENST00000575560 COL8A2P25067 703 aa8.59□□□□□ -1.03
CALCOCO2-227ENST00000575560 EVX1P49640 407 aa8.59□□□□□ -1.03
CALCOCO2-227ENST00000575560 SH3BGRP55822 239 aaPredicted RBP8.59□□□□□ -1.03
CALCOCO2-227ENST00000575560 LMO4P61968 165 aa8.59□□□□□ -1.03
CALCOCO2-227ENST00000575560 IL1RL1Q01638 556 aa8.59□□□□□ -1.03
CALCOCO2-227ENST00000575560 EPS8Q12929 822 aa8.59□□□□□ -1.03
CALCOCO2-227ENST00000575560 OR7A5Q15622 319 aa8.59□□□□□ -1.03
CALCOCO2-227ENST00000575560 GSTA3Q16772 222 aa8.59□□□□□ -1.03
CALCOCO2-227ENST00000575560 SAXO2Q658L1 398 aa8.59□□□□□ -1.03
CALCOCO2-227ENST00000575560 OR4F3Q6IEY1 312 aa8.59□□□□□ -1.03
CALCOCO2-227ENST00000575560 TNFAIP8L2Q6P589 184 aaPredicted RBP8.59□□□□□ -1.03
CALCOCO2-227ENST00000575560 ZCCHC23Q6ZST2 131 aa8.59□□□□□ -1.03
CALCOCO2-227ENST00000575560 EPHX4Q8IUS5 362 aa8.59□□□□□ -1.03
CALCOCO2-227ENST00000575560 OR8J2Q8NGG1 315 aa8.59□□□□□ -1.03
CALCOCO2-227ENST00000575560 ALKBH3Q96Q83 286 aaPredicted RBP8.59□□□□□ -1.03
CALCOCO2-227ENST00000575560 LRRC37BQ96QE4 947 aa8.59□□□□□ -1.03
CALCOCO2-227ENST00000575560 RBM4Q9BWF3 364 aaKnown RBP8.59□□□□□ -1.03
CALCOCO2-227ENST00000575560 SLC38A1Q9H2H9 487 aa8.59□□□□□ -1.03
CALCOCO2-227ENST00000575560 TPK1Q9H3S4 243 aa8.59□□□□□ -1.03
CALCOCO2-227ENST00000575560 ZNF696Q9H7X3 374 aa8.59□□□□□ -1.03
CALCOCO2-227ENST00000575560 DYNLRB1Q9NP97 96 aa8.59□□□□□ -1.03
CALCOCO2-227ENST00000575560 USP22Q9UPT9 525 aa8.59□□□□□ -1.03
CALCOCO2-227ENST00000575560 GRIP1Q9Y3R0 1128 aa8.59□□□□□ -1.03
CALCOCO2-227ENST00000575560 PRSS51A0A1B0GVH4 220 aa8.58□□□□□ -1.04
CALCOCO2-227ENST00000575560 CFAP73A6NFT4 308 aa8.58□□□□□ -1.04
CALCOCO2-227ENST00000575560 HMGN4O00479 90 aa8.58□□□□□ -1.04
CALCOCO2-227ENST00000575560 SYNGR3O43761 229 aa8.58□□□□□ -1.04
CALCOCO2-227ENST00000575560 ZNF432O94892 652 aa8.58□□□□□ -1.04
CALCOCO2-227ENST00000575560 C1QCP02747 245 aa8.58□□□□□ -1.04
CALCOCO2-227ENST00000575560 TFP02787 698 aa8.58□□□□□ -1.04
CALCOCO2-227ENST00000575560 GAAP10253 952 aa8.58□□□□□ -1.04
CALCOCO2-227ENST00000575560 KRT4P19013 534 aa8.58□□□□□ -1.04
CALCOCO2-227ENST00000575560 ACHEP22303 614 aa8.58□□□□□ -1.04
CALCOCO2-227ENST00000575560 UQCRC2P22695 453 aa8.58□□□□□ -1.04
CALCOCO2-227ENST00000575560 NR4A1P22736 598 aa8.58□□□□□ -1.04
CALCOCO2-227ENST00000575560 CXCR1P25024 350 aa8.58□□□□□ -1.04
CALCOCO2-227ENST00000575560 ALDH3A1P30838 453 aa8.58□□□□□ -1.04
CALCOCO2-227ENST00000575560 ARR3P36575 388 aa8.58□□□□□ -1.04
CALCOCO2-227ENST00000575560 LIMS1P48059 325 aa8.58□□□□□ -1.04
CALCOCO2-227ENST00000575560 TMEM33P57088 247 aa8.58□□□□□ -1.04
CALCOCO2-227ENST00000575560 ARF1P84077 181 aaKnown RBP8.58□□□□□ -1.04
CALCOCO2-227ENST00000575560 ROR2Q01974 943 aaKnown RBP8.58□□□□□ -1.04
CALCOCO2-227ENST00000575560 EMX2Q04743 252 aa8.58□□□□□ -1.04
CALCOCO2-227ENST00000575560 DAG1Q14118 895 aa8.58□□□□□ -1.04
CALCOCO2-227ENST00000575560 MSMPQ1L6U9 139 aa8.58□□□□□ -1.04
CALCOCO2-227ENST00000575560 SLC9B1Q4ZJI4 515 aa8.58□□□□□ -1.04
CALCOCO2-227ENST00000575560 GPAT3Q53EU6 434 aa8.58□□□□□ -1.04
CALCOCO2-227ENST00000575560 PDLIM3Q53GG5 364 aaPredicted RBP8.58□□□□□ -1.04
CALCOCO2-227ENST00000575560 AWAT1Q58HT5 328 aa8.58□□□□□ -1.04
CALCOCO2-227ENST00000575560 NIPAL3Q6P499 406 aa8.58□□□□□ -1.04
CALCOCO2-227ENST00000575560 THSD4Q6ZMP0 1018 aa8.58□□□□□ -1.04
CALCOCO2-227ENST00000575560 IL17RDQ8NFM7 739 aa8.58□□□□□ -1.04
CALCOCO2-227ENST00000575560 OR4A15Q8NGL6 344 aa8.58□□□□□ -1.04
CALCOCO2-227ENST00000575560 AGR3Q8TD06 166 aa8.58□□□□□ -1.04
CALCOCO2-227ENST00000575560 NEURL3Q96EH8 262 aa8.58□□□□□ -1.04
CALCOCO2-227ENST00000575560 TRNT1Q96Q11 434 aaKnown RBP8.58□□□□□ -1.04
CALCOCO2-227ENST00000575560 ZNF747Q9BV97 191 aa8.58□□□□□ -1.04
CALCOCO2-227ENST00000575560 MS4A5Q9H3V2 200 aa8.58□□□□□ -1.04
CALCOCO2-227ENST00000575560 MTHFD2LQ9H903 347 aaPredicted RBP8.58□□□□□ -1.04
CALCOCO2-227ENST00000575560 LPAR2Q9HBW0 351 aa8.58□□□□□ -1.04
CALCOCO2-227ENST00000575560 NOX3Q9HBY0 568 aa8.58□□□□□ -1.04
CALCOCO2-227ENST00000575560 ADPRHL2Q9NX46 363 aa8.58□□□□□ -1.04
CALCOCO2-227ENST00000575560 ASIC5Q9NY37 505 aa8.58□□□□□ -1.04
CALCOCO2-227ENST00000575560 TREM2Q9NZC2 230 aa8.58□□□□□ -1.04
CALCOCO2-227ENST00000575560 REV1Q9UBZ9 1251 aa8.58□□□□□ -1.04
CALCOCO2-227ENST00000575560 ZDHHC2Q9UIJ5 367 aa8.58□□□□□ -1.04
CALCOCO2-227ENST00000575560 MID2Q9UJV3 735 aa8.58□□□□□ -1.04
CALCOCO2-227ENST00000575560 CMAHPQ9Y471 501 aa8.58□□□□□ -1.04
CALCOCO2-227ENST00000575560 VWFP04275 2813 aa8.58□□□□□ -1.04
CALCOCO2-227ENST00000575560 TRAV20A0A0B4J274 112 aa8.57□□□□□ -1.04
CALCOCO2-227ENST00000575560 A8MVM7 634 aa8.57□□□□□ -1.04
CALCOCO2-227ENST00000575560 TMPRSS2O15393 492 aa8.57□□□□□ -1.04
CALCOCO2-227ENST00000575560 NPIPB7O75200 414 aa8.57□□□□□ -1.04
CALCOCO2-227ENST00000575560 PNPP00491 289 aa8.57□□□□□ -1.04
CALCOCO2-227ENST00000575560 HPXP02790 462 aa8.57□□□□□ -1.04
CALCOCO2-227ENST00000575560 SHBGP04278 402 aa8.57□□□□□ -1.04
CALCOCO2-227ENST00000575560 CHRM4P08173 479 aa8.57□□□□□ -1.04
CALCOCO2-227ENST00000575560 TFPTP0C1Z6 253 aa8.57□□□□□ -1.04
CALCOCO2-227ENST00000575560 SAGP10523 405 aaPredicted RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms