RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 M0R082 166 aa15.26■□□□□ 0.03
NUP88-210ENST00000574867 OR10H3O60404 316 aa15.26■□□□□ 0.03
NUP88-210ENST00000574867 AQP8O94778 261 aa15.26■□□□□ 0.03
NUP88-210ENST00000574867 AKR7A3O95154 331 aa15.26■□□□□ 0.03
NUP88-210ENST00000574867 VAMP5O95183 116 aa15.26■□□□□ 0.03
NUP88-210ENST00000574867 GLI4P10075 376 aa15.26■□□□□ 0.03
NUP88-210ENST00000574867 PLA2G2AP14555 144 aa15.26■□□□□ 0.03
NUP88-210ENST00000574867 LSM11P83369 360 aaKnown RBP eCLIP15.26■□□□□ 0.03
NUP88-210ENST00000574867 LTBQ06643 244 aa15.26■□□□□ 0.03
NUP88-210ENST00000574867 RIPPLY2Q5TAB7 128 aa15.26■□□□□ 0.03
NUP88-210ENST00000574867 SEM1Q6ZVN7 128 aa15.26■□□□□ 0.03
NUP88-210ENST00000574867 TMPRSS11FQ6ZWK6 438 aa15.26■□□□□ 0.03
NUP88-210ENST00000574867 RPRMLQ8N4K4 120 aa15.26■□□□□ 0.03
NUP88-210ENST00000574867 C9orf106Q8NAJ2 232 aa15.26■□□□□ 0.03
NUP88-210ENST00000574867 OR5J2Q8NH18 312 aa15.26■□□□□ 0.03
NUP88-210ENST00000574867 ZNF417Q8TAU3 575 aa15.26■□□□□ 0.03
NUP88-210ENST00000574867 ROBO4Q8WZ75 1007 aa15.26■□□□□ 0.03
NUP88-210ENST00000574867 ZNF587Q96SQ5 575 aaPredicted RBP15.26■□□□□ 0.03
NUP88-210ENST00000574867 KLHL9Q9P2J3 617 aa15.26■□□□□ 0.03
NUP88-210ENST00000574867 IGHV3-15A0A0B4J1V0 119 aa15.26■□□□□ 0.03
NUP88-210ENST00000574867 ARRDC5A6NEK1 342 aa15.26■□□□□ 0.03
NUP88-210ENST00000574867 KDM4EB2RXH2 506 aaPredicted RBP15.26■□□□□ 0.03
NUP88-210ENST00000574867 LRRN3E7EW58 273 aa15.26■□□□□ 0.03
NUP88-210ENST00000574867 IL2RAP01589 272 aa15.26■□□□□ 0.03
NUP88-210ENST00000574867 HIST1H2ABP04908 130 aa15.26■□□□□ 0.03
NUP88-210ENST00000574867 ASAH2BP0C7U1 165 aa15.26■□□□□ 0.03
NUP88-210ENST00000574867 OMPP47874 163 aa15.26■□□□□ 0.03
NUP88-210ENST00000574867 SLC9A3P48764 834 aa15.26■□□□□ 0.03
NUP88-210ENST00000574867 ARHGDIAP52565 204 aa15.26■□□□□ 0.03
NUP88-210ENST00000574867 PDK3Q15120 406 aa15.26■□□□□ 0.03
NUP88-210ENST00000574867 MICAQ29983 383 aa15.26■□□□□ 0.03
NUP88-210ENST00000574867 H1FNTQ75WM6 255 aaPredicted RBP15.26■□□□□ 0.03
NUP88-210ENST00000574867 HIST3H2AQ7L7L0 130 aa15.26■□□□□ 0.03
NUP88-210ENST00000574867 FJX1Q86VR8 437 aa15.26■□□□□ 0.03
NUP88-210ENST00000574867 MCEMP1Q8IX19 187 aa15.26■□□□□ 0.03
NUP88-210ENST00000574867 TMEM99Q8N816 258 aa15.26■□□□□ 0.03
NUP88-210ENST00000574867 HIST1H2ACQ93077 130 aa15.26■□□□□ 0.03
NUP88-210ENST00000574867 TACO1Q9BSH4 297 aaKnown RBP15.26■□□□□ 0.03
NUP88-210ENST00000574867 RASD1Q9Y272 281 aa15.26■□□□□ 0.03
NUP88-210ENST00000574867 EFCAB9A8MZ26 197 aa15.25■□□□□ 0.03
NUP88-210ENST00000574867 RCBTB2O95199 551 aa15.25■□□□□ 0.03
NUP88-210ENST00000574867 SAGP10523 405 aaPredicted RBP15.25■□□□□ 0.03
NUP88-210ENST00000574867 FUT1P19526 365 aa15.25■□□□□ 0.03
NUP88-210ENST00000574867 CBLP22681 906 aa15.25■□□□□ 0.03
NUP88-210ENST00000574867 ANKDD1AQ495B1 522 aa15.25■□□□□ 0.03
NUP88-210ENST00000574867 PLXDC2Q6UX71 529 aa15.25■□□□□ 0.03
NUP88-210ENST00000574867 NANOGNBQ7Z5D8 188 aa15.25■□□□□ 0.03
NUP88-210ENST00000574867 MARVELD2Q8N4S9 558 aa15.25■□□□□ 0.03
NUP88-210ENST00000574867 LRTOMTQ8WZ04 291 aa15.25■□□□□ 0.03
NUP88-210ENST00000574867 NRBF2Q96F24 287 aa15.25■□□□□ 0.03
NUP88-210ENST00000574867 GMPPAQ96IJ6 420 aaPredicted RBP15.25■□□□□ 0.03
NUP88-210ENST00000574867 FAM46AQ96IP4 442 aaKnown RBP15.25■□□□□ 0.03
NUP88-210ENST00000574867 SF3B5Q9BWJ5 86 aaKnown RBP15.25■□□□□ 0.03
NUP88-210ENST00000574867 DOCK7Q96N67 2140 aa15.25■□□□□ 0.03
NUP88-210ENST00000574867 ZNF814B7Z6K7 855 aa15.24■□□□□ 0.03
NUP88-210ENST00000574867 LRRTM2O43300 516 aa15.24■□□□□ 0.03
NUP88-210ENST00000574867 PLGP00747 810 aaPredicted RBP15.24■□□□□ 0.03
NUP88-210ENST00000574867 CRHP06850 196 aa15.24■□□□□ 0.03
NUP88-210ENST00000574867 MAKP20794 623 aa15.24■□□□□ 0.03
NUP88-210ENST00000574867 CEACAM8P31997 349 aaPredicted RBP15.24■□□□□ 0.03
NUP88-210ENST00000574867 GPR4P46093 362 aa15.24■□□□□ 0.03
NUP88-210ENST00000574867 P2RY4P51582 365 aa15.24■□□□□ 0.03
NUP88-210ENST00000574867 SLC16A1P53985 500 aa15.24■□□□□ 0.03
NUP88-210ENST00000574867 PER3P56645 1201 aa15.24■□□□□ 0.03
NUP88-210ENST00000574867 RASGEF1BQ0VAM2 473 aa15.24■□□□□ 0.03
NUP88-210ENST00000574867 PMPCAQ10713 525 aa15.24■□□□□ 0.03
NUP88-210ENST00000574867 PPP1R8Q12972 351 aaKnown RBP15.24■□□□□ 0.03
NUP88-210ENST00000574867 PMS2P3Q13401 168 aa15.24■□□□□ 0.03
NUP88-210ENST00000574867 C1orf94Q6P1W5 598 aa15.24■□□□□ 0.03
NUP88-210ENST00000574867 ABHD3Q8WU67 409 aa15.24■□□□□ 0.03
NUP88-210ENST00000574867 CENPNQ96H22 339 aaPredicted RBP15.24■□□□□ 0.03
NUP88-210ENST00000574867 PSD2Q9BQI7 771 aa15.24■□□□□ 0.03
NUP88-210ENST00000574867 NTN4Q9HB63 628 aa15.24■□□□□ 0.03
NUP88-210ENST00000574867 EMC3Q9P0I2 261 aa15.24■□□□□ 0.03
NUP88-210ENST00000574867 A0A1W2PNV4 684 aa15.24■□□□□ 0.03
NUP88-210ENST00000574867 HSPB2A8KAH6 182 aa15.24■□□□□ 0.03
NUP88-210ENST00000574867 KLK2P20151 261 aa15.24■□□□□ 0.03
NUP88-210ENST00000574867 FPR3P25089 353 aa15.24■□□□□ 0.03
NUP88-210ENST00000574867 IST1P53990 364 aa15.24■□□□□ 0.03
NUP88-210ENST00000574867 PUDPQ08623 228 aa15.24■□□□□ 0.03
NUP88-210ENST00000574867 POU4F3Q15319 338 aa15.24■□□□□ 0.03
NUP88-210ENST00000574867 HSPB2Q16082 182 aa15.24■□□□□ 0.03
NUP88-210ENST00000574867 TMEM225Q6GV28 225 aa15.24■□□□□ 0.03
NUP88-210ENST00000574867 PGBD2Q6P3X8 592 aa15.24■□□□□ 0.03
NUP88-210ENST00000574867 SHQ1Q6PI26 577 aaKnown RBP15.24■□□□□ 0.03
NUP88-210ENST00000574867 OR10G2Q8NGC3 310 aa15.24■□□□□ 0.03
NUP88-210ENST00000574867 GIPC3Q8TF64 312 aa15.24■□□□□ 0.03
NUP88-210ENST00000574867 RND1Q92730 232 aa15.24■□□□□ 0.03
NUP88-210ENST00000574867 BCO1Q9HAY6 547 aa15.24■□□□□ 0.03
NUP88-210ENST00000574867 KLHL13Q9P2N7 655 aa15.24■□□□□ 0.03
NUP88-210ENST00000574867 SEC14L4Q9UDX3 406 aa15.24■□□□□ 0.03
NUP88-210ENST00000574867 SLC5A6Q9Y289 635 aa15.24■□□□□ 0.03
NUP88-210ENST00000574867 IGKV3D-15A0A087WSY6 115 aa15.23■□□□□ 0.03
NUP88-210ENST00000574867 ZNF716A6NP11 495 aa15.23■□□□□ 0.03
NUP88-210ENST00000574867 J3QKU1 62 aa15.23■□□□□ 0.03
NUP88-210ENST00000574867 KLF4O43474 513 aa15.23■□□□□ 0.03
NUP88-210ENST00000574867 SS18L1O75177 396 aaPredicted RBP15.23■□□□□ 0.03
NUP88-210ENST00000574867 TOXO94900 526 aa15.23■□□□□ 0.03
NUP88-210ENST00000574867 OR6A2O95222 327 aa15.23■□□□□ 0.03
NUP88-210ENST00000574867 ELF3P78545 371 aaPredicted RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms