RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 SLC9B1Q4ZJI4 515 aa13.27□□□□□ -0.29
CTNS-209ENST00000574776 NIPAL3Q6P499 406 aa13.27□□□□□ -0.29
CTNS-209ENST00000574776 LINGO2Q7L985 606 aa13.27□□□□□ -0.29
CTNS-209ENST00000574776 ABHD12BQ7Z5M8 362 aaPredicted RBP13.27□□□□□ -0.29
CTNS-209ENST00000574776 EPHX4Q8IUS5 362 aa13.27□□□□□ -0.29
CTNS-209ENST00000574776 PHC2Q8IXK0 858 aa13.27□□□□□ -0.29
CTNS-209ENST00000574776 KDM8Q8N371 416 aa13.27□□□□□ -0.29
CTNS-209ENST00000574776 OR1K1Q8NGR3 316 aa13.27□□□□□ -0.29
CTNS-209ENST00000574776 BCL2L2Q92843 193 aaPredicted RBP13.27□□□□□ -0.29
CTNS-209ENST00000574776 SLC25A36Q96CQ1 311 aa13.27□□□□□ -0.29
CTNS-209ENST00000574776 TMEM19Q96HH6 336 aa13.27□□□□□ -0.29
CTNS-209ENST00000574776 BOD1Q96IK1 185 aa13.27□□□□□ -0.29
CTNS-209ENST00000574776 SPATA9Q9BWV2 254 aa13.27□□□□□ -0.29
CTNS-209ENST00000574776 BEX2Q9BXY8 128 aa13.27□□□□□ -0.29
CTNS-209ENST00000574776 CDC42EP3Q9UKI2 254 aa13.27□□□□□ -0.29
CTNS-209ENST00000574776 A0A096LPE4 126 aa13.26□□□□□ -0.29
CTNS-209ENST00000574776 A0A0G2JPF8 293 aa13.26□□□□□ -0.29
CTNS-209ENST00000574776 A0A1W2PPZ6 126 aa13.26□□□□□ -0.29
CTNS-209ENST00000574776 TMEM120BA0PK00 339 aa13.26□□□□□ -0.29
CTNS-209ENST00000574776 HNRNPCL2B2RXH8 293 aa13.26□□□□□ -0.29
CTNS-209ENST00000574776 HNRNPCL3B7ZW38 293 aa13.26□□□□□ -0.29
CTNS-209ENST00000574776 ZNF587BE7ETH6 402 aa13.26□□□□□ -0.29
CTNS-209ENST00000574776 SLCO1B7G3V0H7 640 aa13.26□□□□□ -0.29
CTNS-209ENST00000574776 FRS3O43559 492 aa13.26□□□□□ -0.29
CTNS-209ENST00000574776 HNRNPCL1O60812 293 aaKnown RBP13.26□□□□□ -0.29
CTNS-209ENST00000574776 NPIPB7O75200 414 aa13.26□□□□□ -0.29
CTNS-209ENST00000574776 UPK3AO75631 287 aa13.26□□□□□ -0.29
CTNS-209ENST00000574776 CSF3P09919 207 aa13.26□□□□□ -0.29
CTNS-209ENST00000574776 ZCCHC18P0CG32 403 aa13.26□□□□□ -0.29
CTNS-209ENST00000574776 FAM157CP0CG43 387 aa13.26□□□□□ -0.29
CTNS-209ENST00000574776 HNRNPCL4P0DMR1 293 aa13.26□□□□□ -0.29
CTNS-209ENST00000574776 IGHV4-31P0DP07 118 aa13.26□□□□□ -0.29
CTNS-209ENST00000574776 UBE2NP61088 152 aaKnown RBP13.26□□□□□ -0.29
CTNS-209ENST00000574776 TUBA1BP68363 451 aa13.26□□□□□ -0.29
CTNS-209ENST00000574776 TUBA4AP68366 448 aa13.26□□□□□ -0.29
CTNS-209ENST00000574776 LSM11P83369 360 aaKnown RBP eCLIP13.26□□□□□ -0.29
CTNS-209ENST00000574776 HOXC5Q00444 222 aa13.26□□□□□ -0.29
CTNS-209ENST00000574776 ZSWIM7Q19AV6 140 aa13.26□□□□□ -0.29
CTNS-209ENST00000574776 RNF220Q5VTB9 566 aa13.26□□□□□ -0.29
CTNS-209ENST00000574776 PRAMEF8Q5VWM4 474 aa13.26□□□□□ -0.29
CTNS-209ENST00000574776 PRAMEF7Q5VXH5 474 aa13.26□□□□□ -0.29
CTNS-209ENST00000574776 ATG16L1Q676U5 607 aa13.26□□□□□ -0.29
CTNS-209ENST00000574776 ANKRD16Q6P6B7 361 aa13.26□□□□□ -0.29
CTNS-209ENST00000574776 TUBA1AQ71U36 451 aa13.26□□□□□ -0.29
CTNS-209ENST00000574776 SERPINA11Q86U17 422 aa13.26□□□□□ -0.29
CTNS-209ENST00000574776 TMEM158Q8WZ71 300 aa13.26□□□□□ -0.29
CTNS-209ENST00000574776 VPS33AQ96AX1 596 aa13.26□□□□□ -0.29
CTNS-209ENST00000574776 C3orf49Q96BT1 292 aa13.26□□□□□ -0.29
CTNS-209ENST00000574776 ITCHQ96J02 903 aa13.26□□□□□ -0.29
CTNS-209ENST00000574776 MAELQ96JY0 434 aaKnown RBP13.26□□□□□ -0.29
CTNS-209ENST00000574776 SLC38A2Q96QD8 506 aa13.26□□□□□ -0.29
CTNS-209ENST00000574776 ARMC7Q9H6L4 198 aa13.26□□□□□ -0.29
CTNS-209ENST00000574776 RMND5AQ9H871 391 aa13.26□□□□□ -0.29
CTNS-209ENST00000574776 OBP2BQ9NPH6 170 aa13.26□□□□□ -0.29
CTNS-209ENST00000574776 RAB21Q9UL25 225 aa13.26□□□□□ -0.29
CTNS-209ENST00000574776 RASD1Q9Y272 281 aa13.26□□□□□ -0.29
CTNS-209ENST00000574776 MALRD1Q5VYJ5 2156 aa13.25□□□□□ -0.29
CTNS-209ENST00000574776 TMEM247A6NEH6 219 aa13.25□□□□□ -0.29
CTNS-209ENST00000574776 CRYAAP02489 173 aa13.25□□□□□ -0.29
CTNS-209ENST00000574776 NUDT7P0C024 238 aa13.25□□□□□ -0.29
CTNS-209ENST00000574776 SERPINF1P36955 418 aa13.25□□□□□ -0.29
CTNS-209ENST00000574776 RPS5P46782 204 aaKnown RBP13.25□□□□□ -0.29
CTNS-209ENST00000574776 PDLIM4P50479 330 aa13.25□□□□□ -0.29
CTNS-209ENST00000574776 POLR2JP52435 117 aaKnown RBP13.25□□□□□ -0.29
CTNS-209ENST00000574776 ZNF311Q5JNZ3 666 aa13.25□□□□□ -0.29
CTNS-209ENST00000574776 C6orf10Q5SRN2 563 aa13.25□□□□□ -0.29
CTNS-209ENST00000574776 MAVSQ7Z434 540 aa13.25□□□□□ -0.29
CTNS-209ENST00000574776 CROCCP2Q86T23 111 aa13.25□□□□□ -0.29
CTNS-209ENST00000574776 ARIH2OSQ8N7S6 290 aa13.25□□□□□ -0.29
CTNS-209ENST00000574776 OR9I1Q8NGQ6 314 aa13.25□□□□□ -0.29
CTNS-209ENST00000574776 MFSD8Q8NHS3 518 aa13.25□□□□□ -0.29
CTNS-209ENST00000574776 STK35Q8TDR2 534 aa13.25□□□□□ -0.29
CTNS-209ENST00000574776 FOXN4Q96NZ1 517 aa13.25□□□□□ -0.29
CTNS-209ENST00000574776 SORCS2Q96PQ0 1159 aa13.25□□□□□ -0.29
CTNS-209ENST00000574776 ALKBH3Q96Q83 286 aaPredicted RBP13.25□□□□□ -0.29
CTNS-209ENST00000574776 OR52B2Q96RD2 323 aa13.25□□□□□ -0.29
CTNS-209ENST00000574776 VRK1Q99986 396 aaPredicted RBP13.25□□□□□ -0.29
CTNS-209ENST00000574776 KCNS3Q9BQ31 491 aa13.25□□□□□ -0.29
CTNS-209ENST00000574776 CACYBPQ9HB71 228 aaKnown RBP13.25□□□□□ -0.29
CTNS-209ENST00000574776 SDR39U1Q9NRG7 319 aaPredicted RBP13.25□□□□□ -0.29
CTNS-209ENST00000574776 ZIM2Q9NZV7 527 aa13.25□□□□□ -0.29
CTNS-209ENST00000574776 IFT52Q9Y366 437 aa13.25□□□□□ -0.29
CTNS-209ENST00000574776 A0A096LPI6 279 aa13.24□□□□□ -0.29
CTNS-209ENST00000574776 OR6C65A6NJZ3 312 aa13.24□□□□□ -0.29
CTNS-209ENST00000574776 VWC2LB2RUY7 222 aa13.24□□□□□ -0.29
CTNS-209ENST00000574776 TMEM229AB2RXF0 380 aa13.24□□□□□ -0.29
CTNS-209ENST00000574776 UBDO15205 165 aa13.24□□□□□ -0.29
CTNS-209ENST00000574776 PHF1O43189 567 aaPredicted RBP13.24□□□□□ -0.29
CTNS-209ENST00000574776 LMX1BO60663 402 aa13.24□□□□□ -0.29
CTNS-209ENST00000574776 AHSA1O95433 338 aa13.24□□□□□ -0.29
CTNS-209ENST00000574776 PNMTP11086 282 aa13.24□□□□□ -0.29
CTNS-209ENST00000574776 ZNF16P17020 682 aaPredicted RBP13.24□□□□□ -0.29
CTNS-209ENST00000574776 CLDN17P56750 224 aa13.24□□□□□ -0.29
CTNS-209ENST00000574776 SNRPD2P62316 118 aaKnown RBP13.24□□□□□ -0.29
CTNS-209ENST00000574776 ROR2Q01974 943 aaKnown RBP13.24□□□□□ -0.29
CTNS-209ENST00000574776 EGR4Q05215 589 aa13.24□□□□□ -0.29
CTNS-209ENST00000574776 GGTLC2Q14390 218 aa13.24□□□□□ -0.29
CTNS-209ENST00000574776 CARTPTQ16568 116 aa13.24□□□□□ -0.29
CTNS-209ENST00000574776 VHLLQ6RSH7 139 aa13.24□□□□□ -0.29
CTNS-209ENST00000574776 ANKS4BQ8N8V4 417 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms