RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 HIPK4Q8NE63 616 aa22.87■■□□□ 1.25
NPLOC4-215ENST00000574095 ANKRD27Q96NW4 1050 aa22.87■■□□□ 1.25
NPLOC4-215ENST00000574095 ZNF607Q96SK3 696 aa22.87■■□□□ 1.25
NPLOC4-215ENST00000574095 AMBRA1Q9C0C7 1298 aa22.87■■□□□ 1.25
NPLOC4-215ENST00000574095 PIF1Q9H611 641 aa22.87■■□□□ 1.25
NPLOC4-215ENST00000574095 M0R1B8 84 aa22.86■■□□□ 1.25
NPLOC4-215ENST00000574095 OVOL3O00110 214 aa22.86■■□□□ 1.25
NPLOC4-215ENST00000574095 PNMTP11086 282 aa22.86■■□□□ 1.25
NPLOC4-215ENST00000574095 CDH2P19022 906 aaPredicted RBP22.86■■□□□ 1.25
NPLOC4-215ENST00000574095 MPGP29372 298 aa22.86■■□□□ 1.25
NPLOC4-215ENST00000574095 CDKN1AP38936 164 aa22.86■■□□□ 1.25
NPLOC4-215ENST00000574095 CDH11P55287 796 aa22.86■■□□□ 1.25
NPLOC4-215ENST00000574095 MTPNP58546 118 aa22.86■■□□□ 1.25
NPLOC4-215ENST00000574095 KLHL17Q6TDP4 642 aa22.86■■□□□ 1.25
NPLOC4-215ENST00000574095 C6orf89Q6UWU4 347 aa22.86■■□□□ 1.25
NPLOC4-215ENST00000574095 EPHX4Q8IUS5 362 aa22.86■■□□□ 1.25
NPLOC4-215ENST00000574095 DPP10Q8N608 796 aa22.86■■□□□ 1.25
NPLOC4-215ENST00000574095 POM121Q96HA1 1249 aa22.86■■□□□ 1.25
NPLOC4-215ENST00000574095 CGREF1Q99674 301 aa22.86■■□□□ 1.25
NPLOC4-215ENST00000574095 WFDC6Q9BQY6 131 aa22.86■■□□□ 1.25
NPLOC4-215ENST00000574095 C12orf10Q9HB07 376 aa22.86■■□□□ 1.25
NPLOC4-215ENST00000574095 SEC14L4Q9UDX3 406 aa22.86■■□□□ 1.25
NPLOC4-215ENST00000574095 RASD1Q9Y272 281 aa22.86■■□□□ 1.25
NPLOC4-215ENST00000574095 SERPINB7O75635 380 aa22.85■■□□□ 1.25
NPLOC4-215ENST00000574095 HOXB4P17483 251 aaPredicted RBP22.85■■□□□ 1.25
NPLOC4-215ENST00000574095 PTAFRP25105 342 aa22.85■■□□□ 1.25
NPLOC4-215ENST00000574095 CD40P25942 277 aa22.85■■□□□ 1.25
NPLOC4-215ENST00000574095 SELENOPP49908 381 aa22.85■■□□□ 1.25
NPLOC4-215ENST00000574095 LGALS3BPQ08380 585 aa22.85■■□□□ 1.25
NPLOC4-215ENST00000574095 DMTNQ08495 405 aa22.85■■□□□ 1.25
NPLOC4-215ENST00000574095 SPOCK1Q08629 439 aa22.85■■□□□ 1.25
NPLOC4-215ENST00000574095 ALG10BQ5I7T1 473 aa22.85■■□□□ 1.25
NPLOC4-215ENST00000574095 PTOV1Q86YD1 416 aa22.85■■□□□ 1.25
NPLOC4-215ENST00000574095 ARMC8Q8IUR7 673 aa22.85■■□□□ 1.25
NPLOC4-215ENST00000574095 POMGNT2Q8NAT1 580 aa22.85■■□□□ 1.25
NPLOC4-215ENST00000574095 C1orf162Q8NEQ5 155 aaPredicted RBP22.85■■□□□ 1.25
NPLOC4-215ENST00000574095 DNAJA4Q8WW22 397 aaPredicted RBP22.85■■□□□ 1.25
NPLOC4-215ENST00000574095 TAAR8Q969N4 342 aa22.85■■□□□ 1.25
NPLOC4-215ENST00000574095 GTPBP3Q969Y2 492 aaKnown RBP22.85■■□□□ 1.25
NPLOC4-215ENST00000574095 SIKE1Q9BRV8 207 aa22.85■■□□□ 1.25
NPLOC4-215ENST00000574095 SLC17A5Q9NRA2 495 aa22.85■■□□□ 1.25
NPLOC4-215ENST00000574095 ANGPT4Q9Y264 503 aa22.85■■□□□ 1.25
NPLOC4-215ENST00000574095 HEATR1Q9H583 2144 aaKnown RBP22.85■■□□□ 1.25
NPLOC4-215ENST00000574095 PRORSD1PA6NEY8 169 aa22.84■■□□□ 1.25
NPLOC4-215ENST00000574095 KRT33AO76009 404 aa22.84■■□□□ 1.25
NPLOC4-215ENST00000574095 MFN2O95140 757 aa22.84■■□□□ 1.25
NPLOC4-215ENST00000574095 PTNP21246 168 aa22.84■■□□□ 1.25
NPLOC4-215ENST00000574095 GTF2E2P29084 291 aaKnown RBP22.84■■□□□ 1.25
NPLOC4-215ENST00000574095 RGS8P57771 180 aaPredicted RBP22.84■■□□□ 1.25
NPLOC4-215ENST00000574095 SLC25A3Q00325 362 aa22.84■■□□□ 1.25
NPLOC4-215ENST00000574095 TGFBR3Q03167 851 aa22.84■■□□□ 1.25
NPLOC4-215ENST00000574095 LTBQ06643 244 aa22.84■■□□□ 1.25
NPLOC4-215ENST00000574095 NFYCQ13952 458 aa22.84■■□□□ 1.25
NPLOC4-215ENST00000574095 CYP51A1Q16850 503 aa22.84■■□□□ 1.25
NPLOC4-215ENST00000574095 NIPAL3Q6P499 406 aa22.84■■□□□ 1.25
NPLOC4-215ENST00000574095 SMYD1Q8NB12 490 aa22.84■■□□□ 1.25
NPLOC4-215ENST00000574095 RNF217Q8TC41 542 aa22.84■■□□□ 1.25
NPLOC4-215ENST00000574095 TRMT61AQ96FX7 289 aaKnown RBP22.84■■□□□ 1.25
NPLOC4-215ENST00000574095 RADILQ96JH8 1075 aa22.84■■□□□ 1.25
NPLOC4-215ENST00000574095 SLC13A4Q9UKG4 626 aa22.84■■□□□ 1.25
NPLOC4-215ENST00000574095 MGAT4BQ9UQ53 548 aa22.84■■□□□ 1.25
NPLOC4-215ENST00000574095 IGKV1D-42A0A075B6H8 117 aa22.83■■□□□ 1.25
NPLOC4-215ENST00000574095 TPST2O60704 377 aa22.83■■□□□ 1.25
NPLOC4-215ENST00000574095 LY6G6DO95868 133 aa22.83■■□□□ 1.25
NPLOC4-215ENST00000574095 CD8AP01732 235 aa22.83■■□□□ 1.25
NPLOC4-215ENST00000574095 CBLP22681 906 aa22.83■■□□□ 1.25
NPLOC4-215ENST00000574095 NCALDP61601 193 aa22.83■■□□□ 1.25
NPLOC4-215ENST00000574095 OR1Q1Q15612 314 aa22.83■■□□□ 1.25
NPLOC4-215ENST00000574095 METTL21CQ5VZV1 264 aa22.83■■□□□ 1.25
NPLOC4-215ENST00000574095 ULK3Q6PHR2 472 aa22.83■■□□□ 1.25
NPLOC4-215ENST00000574095 SLC22A25Q6T423 547 aa22.83■■□□□ 1.25
NPLOC4-215ENST00000574095 C17orf78Q8N4C9 275 aa22.83■■□□□ 1.25
NPLOC4-215ENST00000574095 C11orf65Q8NCR3 313 aa22.83■■□□□ 1.25
NPLOC4-215ENST00000574095 BHLHE22Q8NFJ8 381 aaPredicted RBP22.83■■□□□ 1.25
NPLOC4-215ENST00000574095 TSPEARQ8WU66 669 aa22.83■■□□□ 1.25
NPLOC4-215ENST00000574095 SLC38A4Q969I6 547 aa22.83■■□□□ 1.25
NPLOC4-215ENST00000574095 TRAF4Q9BUZ4 470 aaPredicted RBP22.83■■□□□ 1.25
NPLOC4-215ENST00000574095 TMEM120AQ9BXJ8 343 aa22.83■■□□□ 1.25
NPLOC4-215ENST00000574095 TMEM27Q9HBJ8 222 aa22.83■■□□□ 1.25
NPLOC4-215ENST00000574095 TESQ9UGI8 421 aaKnown RBP22.83■■□□□ 1.25
NPLOC4-215ENST00000574095 AMDHD2Q9Y303 409 aa22.83■■□□□ 1.25
NPLOC4-215ENST00000574095 E7EQL1 145 aa22.82■■□□□ 1.24
NPLOC4-215ENST00000574095 SF3A3Q12874 501 aaKnown RBP eCLIP22.82■■□□□ 1.24
NPLOC4-215ENST00000574095 HIKESHIQ53FT3 197 aa22.82■■□□□ 1.24
NPLOC4-215ENST00000574095 FAM91A1Q658Y4 838 aa22.82■■□□□ 1.24
NPLOC4-215ENST00000574095 SLC47A1Q96FL8 570 aa22.82■■□□□ 1.24
NPLOC4-215ENST00000574095 ALG2Q9H553 416 aa22.82■■□□□ 1.24
NPLOC4-215ENST00000574095 POU2F3Q9UKI9 436 aa22.82■■□□□ 1.24
NPLOC4-215ENST00000574095 TRAV36DV7A0A075B6V5 113 aa22.81■■□□□ 1.24
NPLOC4-215ENST00000574095 M0QX08 132 aa22.81■■□□□ 1.24
NPLOC4-215ENST00000574095 M0R082 166 aa22.81■■□□□ 1.24
NPLOC4-215ENST00000574095 OR2T1O43869 369 aa22.81■■□□□ 1.24
NPLOC4-215ENST00000574095 UPK3AO75631 287 aa22.81■■□□□ 1.24
NPLOC4-215ENST00000574095 OPN1SWP03999 348 aa22.81■■□□□ 1.24
NPLOC4-215ENST00000574095 HEXAP06865 529 aa22.81■■□□□ 1.24
NPLOC4-215ENST00000574095 ZNF43P17038 809 aa22.81■■□□□ 1.24
NPLOC4-215ENST00000574095 GRPRP30550 384 aa22.81■■□□□ 1.24
NPLOC4-215ENST00000574095 CLDN17P56750 224 aa22.81■■□□□ 1.24
NPLOC4-215ENST00000574095 PCBP3P57721 371 aaKnown RBP22.81■■□□□ 1.24
NPLOC4-215ENST00000574095 PRPS1P60891 318 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms