RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 APOBEC3FQ8IUX4 373 aaKnown RBP1.7□□□□□ -2.14
CHD3-217ENST00000574022 ZNF100Q8IYN0 542 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 CMTM1Q8IZ96 169 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 MCOLN2Q8IZK6 566 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 CMTM8Q8IZV2 173 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 SVOPLQ8N434 492 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 LIX1Q8N485 282 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 C8orf31Q8N9H6 132 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 TTC29Q8NA56 475 aaPredicted RBP1.7□□□□□ -2.14
CHD3-217ENST00000574022 AQP11Q8NBQ7 271 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 FBXO36Q8NEA4 188 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 OR51L1Q8NGJ5 315 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 OR13C9Q8NGT0 318 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 OR56B4Q8NH76 319 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 NDNFQ8TB73 568 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 CD300LFQ8TDQ1 290 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 PAQR8Q8TEZ7 354 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 CA5BP1Q8WTZ4 195 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 PYROXD1Q8WU10 500 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 TFB1MQ8WVM0 346 aaKnown RBP1.7□□□□□ -2.14
CHD3-217ENST00000574022 PIH1D2Q8WWB5 315 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 GTF3AQ92664 365 aaKnown RBP1.7□□□□□ -2.14
CHD3-217ENST00000574022 NRBF2Q96F24 287 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 XPO6Q96QU8 1125 aaKnown RBP1.7□□□□□ -2.14
CHD3-217ENST00000574022 F2RL3Q96RI0 385 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 TBX15Q96SF7 602 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 RBM4BQ9BQ04 359 aaKnown RBP1.7□□□□□ -2.14
CHD3-217ENST00000574022 TMEM175Q9BSA9 504 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 TM2D1Q9BX74 207 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 TMEM59Q9BXS4 323 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 CHIAQ9BZP6 476 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 TM6SF2Q9BZW4 377 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 SLC7A5P2Q9GIP4 190 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 OPN3Q9H1Y3 402 aaPredicted RBP1.7□□□□□ -2.14
CHD3-217ENST00000574022 RANBP3Q9H6Z4 567 aaPredicted RBP1.7□□□□□ -2.14
CHD3-217ENST00000574022 ZNF556Q9HAH1 456 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 FGF22Q9HCT0 170 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 AMBNQ9NP70 447 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 TREM1Q9NP99 234 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 ADAP2Q9NPF8 381 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 TIGARQ9NQ88 270 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 ZC4H2Q9NQZ6 224 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 B3GNT2Q9NY97 397 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 CHMP5Q9NZZ3 219 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 MYEF2Q9P2K5 600 aaKnown RBP1.7□□□□□ -2.14
CHD3-217ENST00000574022 UXTQ9UBK9 157 aaPredicted RBP1.7□□□□□ -2.14
CHD3-217ENST00000574022 PRODH2Q9UF12 536 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 ANKRD30BQ9BXX2 1392 aa1.7□□□□□ -2.14
CHD3-217ENST00000574022 TRBV9A0A0B4J1U6 114 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 GSTTP1A0A1W2PQM5 241 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 A0A1W2PRD5 423 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 RAB19A4D1S5 217 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 ZNF99A8MXY4 864 aaPredicted RBP1.69□□□□□ -2.14
CHD3-217ENST00000574022 ERVV-2B6SEH9 535 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 E9PQ18 207 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 DCTN6O00399 190 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 ZBTB5O15062 677 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 SIVA1O15304 175 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 INSIG1O15503 277 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 RRP8O43159 456 aaKnown RBP1.69□□□□□ -2.14
CHD3-217ENST00000574022 KDELR3O43731 214 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 E2F6O75461 281 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 FCN3O75636 299 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 SCELO95171 688 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 DUS4LO95620 317 aaKnown RBP1.69□□□□□ -2.14
CHD3-217ENST00000574022 SEMA4FO95754 770 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 LALBAP00709 142 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 IGLV2-11P01706 119 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 FGGP02679 453 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 IFNW1P05000 195 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 C2P06681 752 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 HOXD4P09016 255 aaPredicted RBP1.69□□□□□ -2.14
CHD3-217ENST00000574022 CT45A10P0DMU9 189 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 ZNF26P17031 533 aaPredicted RBP1.69□□□□□ -2.14
CHD3-217ENST00000574022 CCNOP22674 350 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 SLC2A5P22732 501 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 LMO2P25791 158 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 CD82P27701 267 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 ADORA2BP29275 332 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 OXTRP30559 389 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 RORAP35398 523 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 HMGCLP35914 325 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 PTGDSP41222 190 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 GPR4P46093 362 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 YAP1P46937 504 aaKnown RBP1.69□□□□□ -2.14
CHD3-217ENST00000574022 RPL29P47914 159 aaKnown RBP1.69□□□□□ -2.14
CHD3-217ENST00000574022 GPM6AP51674 278 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 DLX5P56178 289 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 GSCP56915 257 aaPredicted RBP1.69□□□□□ -2.14
CHD3-217ENST00000574022 GPX6P59796 221 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 TLE4Q04727 773 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 CHRNB3Q05901 458 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 CALCOCO2Q13137 446 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 XRCC4Q13426 336 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 SLC10A1Q14973 349 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 ARL6IP1Q15041 203 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 ANGPT1Q15389 498 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 LTB4RQ15722 352 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 KLHL22Q53GT1 634 aa1.69□□□□□ -2.14
CHD3-217ENST00000574022 SAMD4BQ5PRF9 694 aaKnown RBP1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms