RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 ABLIM2Q6H8Q1 611 aa9.82□□□□□ -0.84
CHD3-216ENST00000573936 VWA1Q6PCB0 445 aa9.82□□□□□ -0.84
CHD3-216ENST00000573936 BEND4Q6ZU67 534 aa9.82□□□□□ -0.84
CHD3-216ENST00000573936 VTCN1Q7Z7D3 282 aa9.82□□□□□ -0.84
CHD3-216ENST00000573936 LUZP2Q86TE4 346 aa9.82□□□□□ -0.84
CHD3-216ENST00000573936 FAM156AQ8NDB6 213 aa9.82□□□□□ -0.84
CHD3-216ENST00000573936 SLC25A36Q96CQ1 311 aa9.82□□□□□ -0.84
CHD3-216ENST00000573936 KTI12Q96EK9 354 aaPredicted RBP9.82□□□□□ -0.84
CHD3-216ENST00000573936 DNAJA3Q96EY1 480 aa9.82□□□□□ -0.84
CHD3-216ENST00000573936 PYURFQ96I23 114 aa9.82□□□□□ -0.84
CHD3-216ENST00000573936 PRRC1Q96M27 445 aa9.82□□□□□ -0.84
CHD3-216ENST00000573936 SPOCK3Q9BQ16 436 aa9.82□□□□□ -0.84
CHD3-216ENST00000573936 PTDSS2Q9BVG9 487 aa9.82□□□□□ -0.84
CHD3-216ENST00000573936 AMBRA1Q9C0C7 1298 aa9.82□□□□□ -0.84
CHD3-216ENST00000573936 ELOVL5Q9NYP7 299 aa9.82□□□□□ -0.84
CHD3-216ENST00000573936 C6orf203Q9P0P8 240 aaPredicted RBP9.82□□□□□ -0.84
CHD3-216ENST00000573936 ACTR3BQ9P1U1 418 aa9.82□□□□□ -0.84
CHD3-216ENST00000573936 RIMS3Q9UJD0 308 aa9.82□□□□□ -0.84
CHD3-216ENST00000573936 RASD1Q9Y272 281 aa9.82□□□□□ -0.84
CHD3-216ENST00000573936 FAM32AQ9Y421 112 aaKnown RBP9.82□□□□□ -0.84
CHD3-216ENST00000573936 CORINQ9Y5Q5 1042 aa9.82□□□□□ -0.84
CHD3-216ENST00000573936 IGKV1D-42A0A075B6H8 117 aa9.81□□□□□ -0.84
CHD3-216ENST00000573936 IGKV3D-15A0A087WSY6 115 aa9.81□□□□□ -0.84
CHD3-216ENST00000573936 HTR3EA5X5Y0 456 aa9.81□□□□□ -0.84
CHD3-216ENST00000573936 ARPC2O15144 300 aa9.81□□□□□ -0.84
CHD3-216ENST00000573936 FZD7O75084 574 aa9.81□□□□□ -0.84
CHD3-216ENST00000573936 AKR7A3O95154 331 aa9.81□□□□□ -0.84
CHD3-216ENST00000573936 MT-ATP6P00846 226 aa9.81□□□□□ -0.84
CHD3-216ENST00000573936 IGF2P01344 180 aa9.81□□□□□ -0.84
CHD3-216ENST00000573936 UQCRC1P31930 480 aa9.81□□□□□ -0.84
CHD3-216ENST00000573936 SLC16A1P53985 500 aa9.81□□□□□ -0.84
CHD3-216ENST00000573936 PIN1Q13526 163 aaPredicted RBP9.81□□□□□ -0.84
CHD3-216ENST00000573936 TRIM25Q14258 630 aaKnown RBP9.81□□□□□ -0.84
CHD3-216ENST00000573936 PGM2L1Q6PCE3 622 aa9.81□□□□□ -0.84
CHD3-216ENST00000573936 ZNF771Q7L3S4 317 aaPredicted RBP9.81□□□□□ -0.84
CHD3-216ENST00000573936 GALNT5Q7Z7M9 940 aa9.81□□□□□ -0.84
CHD3-216ENST00000573936 CCDC103Q8IW40 242 aa9.81□□□□□ -0.84
CHD3-216ENST00000573936 TMEM99Q8N816 258 aa9.81□□□□□ -0.84
CHD3-216ENST00000573936 ZNF610Q8N9Z0 462 aa9.81□□□□□ -0.84
CHD3-216ENST00000573936 TAAR8Q969N4 342 aa9.81□□□□□ -0.84
CHD3-216ENST00000573936 UTP4Q969X6 686 aaKnown RBP9.81□□□□□ -0.84
CHD3-216ENST00000573936 MCUR1Q96AQ8 359 aa9.81□□□□□ -0.84
CHD3-216ENST00000573936 FNDC11Q9BVV2 318 aa9.81□□□□□ -0.84
CHD3-216ENST00000573936 ASPNQ9BXN1 380 aa9.81□□□□□ -0.84
CHD3-216ENST00000573936 KLHL4Q9C0H6 718 aa9.81□□□□□ -0.84
CHD3-216ENST00000573936 ENKD1Q9H0I2 346 aa9.81□□□□□ -0.84
CHD3-216ENST00000573936 PARPBPQ9NWS1 579 aa9.81□□□□□ -0.84
CHD3-216ENST00000573936 B3GALT5Q9Y2C3 310 aa9.81□□□□□ -0.84
CHD3-216ENST00000573936 NOSIPQ9Y314 301 aaKnown RBP9.81□□□□□ -0.84
CHD3-216ENST00000573936 ENPP4Q9Y6X5 453 aa9.81□□□□□ -0.84
CHD3-216ENST00000573936 MED12Q93074 2177 aa9.81□□□□□ -0.84
CHD3-216ENST00000573936 ZNF716A6NP11 495 aa9.8□□□□□ -0.84
CHD3-216ENST00000573936 FTCDNL1E5RQL4 147 aa9.8□□□□□ -0.84
CHD3-216ENST00000573936 C19orf84I3L1E1 186 aa9.8□□□□□ -0.84
CHD3-216ENST00000573936 LYPD3O95274 346 aa9.8□□□□□ -0.84
CHD3-216ENST00000573936 BGLAPP02818 100 aa9.8□□□□□ -0.84
CHD3-216ENST00000573936 THY1P04216 161 aa9.8□□□□□ -0.84
CHD3-216ENST00000573936 HIST1H2ABP04908 130 aa9.8□□□□□ -0.84
CHD3-216ENST00000573936 RHCEP18577 417 aa9.8□□□□□ -0.84
CHD3-216ENST00000573936 MSX2P35548 267 aaPredicted RBP9.8□□□□□ -0.84
CHD3-216ENST00000573936 SORDQ00796 357 aa9.8□□□□□ -0.84
CHD3-216ENST00000573936 TRAP1Q12931 704 aaKnown RBP9.8□□□□□ -0.84
CHD3-216ENST00000573936 SLC17A1Q14916 467 aa9.8□□□□□ -0.84
CHD3-216ENST00000573936 TRAM2Q15035 370 aa9.8□□□□□ -0.84
CHD3-216ENST00000573936 KRTAP21-3Q3LHN1 58 aa9.8□□□□□ -0.84
CHD3-216ENST00000573936 MEX3BQ6ZN04 569 aaKnown RBP9.8□□□□□ -0.84
CHD3-216ENST00000573936 H1FNTQ75WM6 255 aaPredicted RBP9.8□□□□□ -0.84
CHD3-216ENST00000573936 HIST3H2AQ7L7L0 130 aa9.8□□□□□ -0.84
CHD3-216ENST00000573936 NUFIP2Q7Z417 695 aaKnown RBP9.8□□□□□ -0.84
CHD3-216ENST00000573936 DHFR2Q86XF0 187 aa9.8□□□□□ -0.84
CHD3-216ENST00000573936 DMRTC2Q8IXT2 367 aaPredicted RBP9.8□□□□□ -0.84
CHD3-216ENST00000573936 ZNF100Q8IYN0 542 aa9.8□□□□□ -0.84
CHD3-216ENST00000573936 C10orf53Q8N6V4 93 aa9.8□□□□□ -0.84
CHD3-216ENST00000573936 SCAIQ8N9R8 606 aa9.8□□□□□ -0.84
CHD3-216ENST00000573936 ADPRHL1Q8NDY3 354 aa9.8□□□□□ -0.84
CHD3-216ENST00000573936 TMEM239Q8WW34 195 aa9.8□□□□□ -0.84
CHD3-216ENST00000573936 HIST1H2ACQ93077 130 aa9.8□□□□□ -0.84
CHD3-216ENST00000573936 ASB9Q96DX5 294 aa9.8□□□□□ -0.84
CHD3-216ENST00000573936 LRGUKQ96M69 825 aa9.8□□□□□ -0.84
CHD3-216ENST00000573936 ZNF300Q96RE9 604 aaPredicted RBP9.8□□□□□ -0.84
CHD3-216ENST00000573936 PRSS27Q9BQR3 290 aa9.8□□□□□ -0.84
CHD3-216ENST00000573936 ZNF426Q9BUY5 554 aa9.8□□□□□ -0.84
CHD3-216ENST00000573936 TRIM15Q9C019 465 aa9.8□□□□□ -0.84
CHD3-216ENST00000573936 OPN3Q9H1Y3 402 aaPredicted RBP9.8□□□□□ -0.84
CHD3-216ENST00000573936 ANKRD19PQ9H560 264 aa9.8□□□□□ -0.84
CHD3-216ENST00000573936 C12orf49Q9H741 205 aa9.8□□□□□ -0.84
CHD3-216ENST00000573936 FKRPQ9H9S5 495 aa9.8□□□□□ -0.84
CHD3-216ENST00000573936 ING1Q9UK53 422 aaPredicted RBP9.8□□□□□ -0.84
CHD3-216ENST00000573936 A4GNTQ9UNA3 340 aa9.8□□□□□ -0.84
CHD3-216ENST00000573936 MED31Q9Y3C7 131 aa9.8□□□□□ -0.84
CHD3-216ENST00000573936 KIAA1549Q9HCM3 1950 aa9.8□□□□□ -0.84
CHD3-216ENST00000573936 ZNF814B7Z6K7 855 aa9.79□□□□□ -0.84
CHD3-216ENST00000573936 ANKRD65E5RJM6 399 aa9.79□□□□□ -0.84
CHD3-216ENST00000573936 MRPL33O75394 65 aaKnown RBP9.79□□□□□ -0.84
CHD3-216ENST00000573936 CNOT4O95628 575 aaKnown RBP9.79□□□□□ -0.84
CHD3-216ENST00000573936 MT-ND1P03886 318 aa9.79□□□□□ -0.84
CHD3-216ENST00000573936 POU2F1P14859 743 aa9.79□□□□□ -0.84
CHD3-216ENST00000573936 IGFBP2P18065 325 aa9.79□□□□□ -0.84
CHD3-216ENST00000573936 KLK2P20151 261 aa9.79□□□□□ -0.84
CHD3-216ENST00000573936 GRPRP30550 384 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms