RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 GEMIN6Q8WXD5 167 aaKnown RBP11.87□□□□□ -0.51
CCDC40-205ENST00000571028 TMEM158Q8WZ71 300 aa11.87□□□□□ -0.51
CCDC40-205ENST00000571028 SLC25A36Q96CQ1 311 aa11.87□□□□□ -0.51
CCDC40-205ENST00000571028 SLC47A1Q96FL8 570 aa11.87□□□□□ -0.51
CCDC40-205ENST00000571028 SLC41A3Q96GZ6 507 aa11.87□□□□□ -0.51
CCDC40-205ENST00000571028 ADGRG7Q96K78 797 aa11.87□□□□□ -0.51
CCDC40-205ENST00000571028 SEPHS2Q99611 448 aa11.87□□□□□ -0.51
CCDC40-205ENST00000571028 RBM24Q9BX46 236 aaKnown RBP11.87□□□□□ -0.51
CCDC40-205ENST00000571028 SRXN1Q9BYN0 137 aa11.87□□□□□ -0.51
CCDC40-205ENST00000571028 COQ10BQ9H8M1 238 aa11.87□□□□□ -0.51
CCDC40-205ENST00000571028 NDRG3Q9UGV2 375 aa11.87□□□□□ -0.51
CCDC40-205ENST00000571028 RTTNQ86VV8 2226 aa11.86□□□□□ -0.51
CCDC40-205ENST00000571028 A0A0B4J2E0 115 aa11.86□□□□□ -0.51
CCDC40-205ENST00000571028 A0A1B0GX12 115 aa11.86□□□□□ -0.51
CCDC40-205ENST00000571028 TRAPPC13A5PLN9 417 aa11.86□□□□□ -0.51
CCDC40-205ENST00000571028 A8MVM7 634 aa11.86□□□□□ -0.51
CCDC40-205ENST00000571028 KPNA4O00629 521 aaPredicted RBP11.86□□□□□ -0.51
CCDC40-205ENST00000571028 ADAMDEC1O15204 470 aa11.86□□□□□ -0.51
CCDC40-205ENST00000571028 AQP8O94778 261 aa11.86□□□□□ -0.51
CCDC40-205ENST00000571028 DIRAS1O95057 198 aa11.86□□□□□ -0.51
CCDC40-205ENST00000571028 RPS5P46782 204 aaKnown RBP11.86□□□□□ -0.51
CCDC40-205ENST00000571028 DIO1P49895 249 aa11.86□□□□□ -0.51
CCDC40-205ENST00000571028 SIRPAP78324 504 aa11.86□□□□□ -0.51
CCDC40-205ENST00000571028 OR7A5Q15622 319 aa11.86□□□□□ -0.51
CCDC40-205ENST00000571028 PODNL1Q6PEZ8 512 aa11.86□□□□□ -0.51
CCDC40-205ENST00000571028 TMPPEQ6ZT21 453 aa11.86□□□□□ -0.51
CCDC40-205ENST00000571028 GCNT2Q8N0V5 402 aa11.86□□□□□ -0.51
CCDC40-205ENST00000571028 C10orf53Q8N6V4 93 aa11.86□□□□□ -0.51
CCDC40-205ENST00000571028 DNAJA4Q8WW22 397 aaPredicted RBP11.86□□□□□ -0.51
CCDC40-205ENST00000571028 INTS12Q96CB8 462 aaKnown RBP11.86□□□□□ -0.51
CCDC40-205ENST00000571028 PYURFQ96I23 114 aa11.86□□□□□ -0.51
CCDC40-205ENST00000571028 CALHM2Q9HA72 323 aa11.86□□□□□ -0.51
CCDC40-205ENST00000571028 UBTD1Q9HAC8 227 aa11.86□□□□□ -0.51
CCDC40-205ENST00000571028 TIGARQ9NQ88 270 aa11.86□□□□□ -0.51
CCDC40-205ENST00000571028 ACTR3BQ9P1U1 418 aa11.86□□□□□ -0.51
CCDC40-205ENST00000571028 MCTS1Q9ULC4 181 aaKnown RBP11.86□□□□□ -0.51
CCDC40-205ENST00000571028 CLEC4AQ9UMR7 237 aa11.86□□□□□ -0.51
CCDC40-205ENST00000571028 FAM32AQ9Y421 112 aaKnown RBP11.86□□□□□ -0.51
CCDC40-205ENST00000571028 NBEAL1Q6ZS30 2694 aa11.86□□□□□ -0.51
CCDC40-205ENST00000571028 A0A1W2PPR1 153 aa11.85□□□□□ -0.51
CCDC40-205ENST00000571028 CD8B2A6NJW9 211 aa11.85□□□□□ -0.51
CCDC40-205ENST00000571028 ZNF208O43345 1280 aa11.85□□□□□ -0.51
CCDC40-205ENST00000571028 FMO6PO60774 539 aa11.85□□□□□ -0.51
CCDC40-205ENST00000571028 AHSA1O95433 338 aa11.85□□□□□ -0.51
CCDC40-205ENST00000571028 CNOT4O95628 575 aaKnown RBP11.85□□□□□ -0.51
CCDC40-205ENST00000571028 PLGP00747 810 aaPredicted RBP11.85□□□□□ -0.51
CCDC40-205ENST00000571028 THY1P04216 161 aa11.85□□□□□ -0.51
CCDC40-205ENST00000571028 PNMTP11086 282 aa11.85□□□□□ -0.51
CCDC40-205ENST00000571028 IMPDH2P12268 514 aa11.85□□□□□ -0.51
CCDC40-205ENST00000571028 ENPP1P22413 925 aa11.85□□□□□ -0.51
CCDC40-205ENST00000571028 IFNA8P32881 189 aa11.85□□□□□ -0.51
CCDC40-205ENST00000571028 IDUAP35475 653 aa11.85□□□□□ -0.51
CCDC40-205ENST00000571028 FXNQ16595 210 aa11.85□□□□□ -0.51
CCDC40-205ENST00000571028 C1orf140Q5VVS0 124 aa11.85□□□□□ -0.51
CCDC40-205ENST00000571028 ZNF613Q6PF04 617 aa11.85□□□□□ -0.51
CCDC40-205ENST00000571028 TTC33Q6PID6 262 aaPredicted RBP11.85□□□□□ -0.51
CCDC40-205ENST00000571028 LUZP2Q86TE4 346 aa11.85□□□□□ -0.51
CCDC40-205ENST00000571028 CYP4Z1Q86W10 505 aa11.85□□□□□ -0.51
CCDC40-205ENST00000571028 WNT2BQ93097 391 aa11.85□□□□□ -0.51
CCDC40-205ENST00000571028 ASB9Q96DX5 294 aa11.85□□□□□ -0.51
CCDC40-205ENST00000571028 KTI12Q96EK9 354 aaPredicted RBP11.85□□□□□ -0.51
CCDC40-205ENST00000571028 UCN2Q96RP3 112 aa11.85□□□□□ -0.51
CCDC40-205ENST00000571028 FNDC11Q9BVV2 318 aa11.85□□□□□ -0.51
CCDC40-205ENST00000571028 TAPBPLQ9BX59 468 aa11.85□□□□□ -0.51
CCDC40-205ENST00000571028 TRIM15Q9C019 465 aa11.85□□□□□ -0.51
CCDC40-205ENST00000571028 MUC13Q9H3R2 512 aa11.85□□□□□ -0.51
CCDC40-205ENST00000571028 PAQR5Q9NXK6 330 aaPredicted RBP11.85□□□□□ -0.51
CCDC40-205ENST00000571028 CLCF1Q9UBD9 225 aa11.85□□□□□ -0.51
CCDC40-205ENST00000571028 RIMS3Q9UJD0 308 aa11.85□□□□□ -0.51
CCDC40-205ENST00000571028 A0A087WUJ7 227 aa11.84□□□□□ -0.51
CCDC40-205ENST00000571028 CHP2O43745 196 aa11.84□□□□□ -0.51
CCDC40-205ENST00000571028 IL18BPO95998 194 aa11.84□□□□□ -0.51
CCDC40-205ENST00000571028 MT-ND1P03886 318 aa11.84□□□□□ -0.51
CCDC40-205ENST00000571028 TMIGD3P0DMS9 266 aaPredicted RBP11.84□□□□□ -0.51
CCDC40-205ENST00000571028 CSNK2A1P68400 391 aaPredicted RBP11.84□□□□□ -0.51
CCDC40-205ENST00000571028 FOXF2Q12947 444 aa11.84□□□□□ -0.51
CCDC40-205ENST00000571028 ZNF239Q16600 458 aaKnown RBP11.84□□□□□ -0.51
CCDC40-205ENST00000571028 PGM2L1Q6PCE3 622 aa11.84□□□□□ -0.51
CCDC40-205ENST00000571028 WDR88Q6ZMY6 472 aa11.84□□□□□ -0.51
CCDC40-205ENST00000571028 SPATA24Q86W54 205 aa11.84□□□□□ -0.51
CCDC40-205ENST00000571028 NKAIN4Q8IVV8 208 aa11.84□□□□□ -0.51
CCDC40-205ENST00000571028 CNEP1R1Q8N9A8 125 aa11.84□□□□□ -0.51
CCDC40-205ENST00000571028 SLC38A4Q969I6 547 aa11.84□□□□□ -0.51
CCDC40-205ENST00000571028 CPNE4Q96A23 557 aaPredicted RBP11.84□□□□□ -0.51
CCDC40-205ENST00000571028 ZNF775Q96BV0 537 aaPredicted RBP11.84□□□□□ -0.51
CCDC40-205ENST00000571028 ZHX1-C8orf76Q96EF9 292 aa11.84□□□□□ -0.51
CCDC40-205ENST00000571028 PRRC1Q96M27 445 aa11.84□□□□□ -0.51
CCDC40-205ENST00000571028 TM9SF2Q99805 663 aa11.84□□□□□ -0.51
CCDC40-205ENST00000571028 POTEKPQ9BYX7 375 aa11.84□□□□□ -0.51
CCDC40-205ENST00000571028 LRMDAQ9H2I8 198 aa11.84□□□□□ -0.51
CCDC40-205ENST00000571028 GALNT8Q9NY28 637 aa11.84□□□□□ -0.51
CCDC40-205ENST00000571028 C6orf203Q9P0P8 240 aaPredicted RBP11.84□□□□□ -0.51
CCDC40-205ENST00000571028 KLHL13Q9P2N7 655 aa11.84□□□□□ -0.51
CCDC40-205ENST00000571028 HDGFL3Q9Y3E1 203 aa11.84□□□□□ -0.51
CCDC40-205ENST00000571028 ENPP4Q9Y6X5 453 aa11.84□□□□□ -0.51
CCDC40-205ENST00000571028 MXRA5Q9NR99 2828 aa11.84□□□□□ -0.51
CCDC40-205ENST00000571028 IGKV1D-42A0A075B6H8 117 aa11.83□□□□□ -0.52
CCDC40-205ENST00000571028 MBD3L4A6NDZ8 208 aaPredicted RBP11.83□□□□□ -0.52
CCDC40-205ENST00000571028 MBD3L3A6NE82 208 aaPredicted RBP11.83□□□□□ -0.52
CCDC40-205ENST00000571028 MBD3L5A6NJ08 208 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms