RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 GP1BAP07359 652 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 RNF224P0DH78 156 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 PET100P0DJ07 73 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 NR2F6P10588 404 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 IL7RP16871 459 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 CD22P20273 847 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 FPR2P25090 351 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 S100PP25815 95 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 ACRV1P26436 265 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 STOMP27105 288 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 GTF2E2P29084 291 aaKnown RBP3.25□□□□□ -1.89
SMG6-208ENST00000570874 PRDX3P30048 256 aaKnown RBP3.25□□□□□ -1.89
SMG6-208ENST00000570874 KDELR2P33947 212 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 MPIP34949 423 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 AHRP35869 848 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 SERPINB5P36952 375 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 CEACAM3P40198 252 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 AQP2P41181 271 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 PSMD8P48556 350 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 SPINT3P49223 89 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 SRP9P49458 86 aaKnown RBP3.25□□□□□ -1.89
SMG6-208ENST00000570874 AGTR2P50052 363 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 RPL14P50914 215 aaKnown RBP3.25□□□□□ -1.89
SMG6-208ENST00000570874 NKX2-5P52952 324 aaPredicted RBP3.25□□□□□ -1.89
SMG6-208ENST00000570874 ART1P52961 327 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 AQP5P55064 265 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 FOXA1P55317 472 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 CLDN18P56856 261 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 EEFSECP57772 596 aaKnown RBP3.25□□□□□ -1.89
SMG6-208ENST00000570874 GNG2P59768 71 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 ADORA2A-AS1P86434 159 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 TNFRSF9Q07011 255 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 FUT7Q11130 342 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 RUNX3Q13761 415 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 KRT33BQ14525 404 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 TRAM2Q15035 370 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 RNPS1Q15287 305 aaKnown RBP3.25□□□□□ -1.89
SMG6-208ENST00000570874 SLC9A3R2Q15599 337 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 TSNQ15631 228 aaKnown RBP3.25□□□□□ -1.89
SMG6-208ENST00000570874 ACKR1Q16570 336 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 TMEM249Q2WGJ8 235 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 SLC36A2Q495M3 483 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 AASDHQ4L235 1098 aaPredicted RBP3.25□□□□□ -1.89
SMG6-208ENST00000570874 SOWAHCQ53LP3 525 aaPredicted RBP3.25□□□□□ -1.89
SMG6-208ENST00000570874 ACSBG2Q5FVE4 666 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 ARL13AQ5H913 290 aaPredicted RBP3.25□□□□□ -1.89
SMG6-208ENST00000570874 CXorf66Q5JRM2 361 aaPredicted RBP3.25□□□□□ -1.89
SMG6-208ENST00000570874 C9orf64Q5T6V5 341 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 DCAF12L2Q5VW00 463 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 LYSMD4Q5XG99 296 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 TMEM198Q66K66 360 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 OR52E8Q6IFG1 317 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 FRMPD2BQ6IN97 320 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 UGT3A1Q6NUS8 523 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 ADAM5Q6NVV9 412 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 TEX38Q6PEX7 206 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 FIGNL1Q6PIW4 674 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 KIAA1324Q6UXG2 1013 aaKnown RBP3.25□□□□□ -1.89
SMG6-208ENST00000570874 ASCL4Q6XD76 172 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 TMEM184AQ6ZMB5 413 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 MBOAT1Q6ZNC8 495 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 C17orf107Q6ZR85 190 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 TPRG1Q6ZUI0 275 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 DPPA4Q7L190 304 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 PIWIL4Q7Z3Z4 852 aaKnown RBP3.25□□□□□ -1.89
SMG6-208ENST00000570874 SLC22A16Q86VW1 577 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 ANKRD46Q86W74 232 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 DHFR2Q86XF0 187 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 PDSS2Q86YH6 399 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 SPPL2CQ8IUH8 684 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 CCDC71Q8IV32 467 aaPredicted RBP3.25□□□□□ -1.89
SMG6-208ENST00000570874 VRK3Q8IV63 474 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 CROCCP3Q8IVE0 287 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 MMAAQ8IVH4 418 aaKnown RBP3.25□□□□□ -1.89
SMG6-208ENST00000570874 FUNDC1Q8IVP5 155 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 LAS2Q8IYD9 372 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 ZDHHC23Q8IYP9 409 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 BOD1L2Q8IYS8 172 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 HS3ST5Q8IZT8 346 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 CLDN19Q8N6F1 224 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 DTX3Q8N9I9 347 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 MFSD9Q8NBP5 474 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 CCDC54Q8NEL0 328 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 OR52N2Q8NGI0 321 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 OR4D10Q8NGI6 311 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 VANGL1Q8TAA9 524 aaPredicted RBP3.25□□□□□ -1.89
SMG6-208ENST00000570874 NANPQ8TBE9 248 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 CXorf40AQ8TE69 158 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 PPP4R1Q8TF05 950 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 EEF1AKMT1Q8WVE0 214 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 SPRYD4Q8WW59 207 aaPredicted RBP3.25□□□□□ -1.89
SMG6-208ENST00000570874 PIGCQ92535 297 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 LHX4Q969G2 390 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 COQ8BQ96D53 544 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 OTUB1Q96FW1 271 aaPredicted RBP3.25□□□□□ -1.89
SMG6-208ENST00000570874 MS4A10Q96PG2 267 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 ZNF385AQ96PM9 386 aaKnown RBP3.25□□□□□ -1.89
SMG6-208ENST00000570874 OR52B2Q96RD2 323 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 SNX18Q96RF0 628 aa3.25□□□□□ -1.89
SMG6-208ENST00000570874 KCNA7Q96RP8 456 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms