RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 MID2Q9UJV3 735 aa8.9□□□□□ -0.98
CTDNEP1-202ENST00000570380 OSGIN1Q9UJX0 560 aa8.9□□□□□ -0.98
CTDNEP1-202ENST00000570380 FZR1Q9UM11 496 aa8.9□□□□□ -0.98
CTDNEP1-202ENST00000570380 TANC2Q9HCD6 1990 aa8.9□□□□□ -0.99
CTDNEP1-202ENST00000570380 AQP7P3A6NL99 342 aa8.89□□□□□ -0.99
CTDNEP1-202ENST00000570380 TRIM49D1C9J1S8 452 aa8.89□□□□□ -0.99
CTDNEP1-202ENST00000570380 STX11O75558 287 aa8.89□□□□□ -0.99
CTDNEP1-202ENST00000570380 INHBAP08476 426 aa8.89□□□□□ -0.99
CTDNEP1-202ENST00000570380 ZNF35P13682 527 aa8.89□□□□□ -0.99
CTDNEP1-202ENST00000570380 ATP5F1P24539 256 aaPredicted RBP8.89□□□□□ -0.99
CTDNEP1-202ENST00000570380 PCGF2P35227 344 aa8.89□□□□□ -0.99
CTDNEP1-202ENST00000570380 IDH2P48735 452 aaKnown RBP8.89□□□□□ -0.99
CTDNEP1-202ENST00000570380 SH3BGRP55822 239 aaPredicted RBP8.89□□□□□ -0.99
CTDNEP1-202ENST00000570380 RPS26P62854 115 aaKnown RBP8.89□□□□□ -0.99
CTDNEP1-202ENST00000570380 LCN2P80188 198 aa8.89□□□□□ -0.99
CTDNEP1-202ENST00000570380 CAV1Q03135 178 aa8.89□□□□□ -0.99
CTDNEP1-202ENST00000570380 OR7A5Q15622 319 aa8.89□□□□□ -0.99
CTDNEP1-202ENST00000570380 AP1ARQ63HQ0 302 aa8.89□□□□□ -0.99
CTDNEP1-202ENST00000570380 TMEM225Q6GV28 225 aa8.89□□□□□ -0.99
CTDNEP1-202ENST00000570380 NIPAL3Q6P499 406 aa8.89□□□□□ -0.99
CTDNEP1-202ENST00000570380 C17orf107Q6ZR85 190 aa8.89□□□□□ -0.99
CTDNEP1-202ENST00000570380 SPATC1Q76KD6 591 aa8.89□□□□□ -0.99
CTDNEP1-202ENST00000570380 EPHX4Q8IUS5 362 aa8.89□□□□□ -0.99
CTDNEP1-202ENST00000570380 RELL1Q8IUW5 271 aa8.89□□□□□ -0.99
CTDNEP1-202ENST00000570380 WDFY1Q8IWB7 410 aa8.89□□□□□ -0.99
CTDNEP1-202ENST00000570380 GSPT2Q8IYD1 628 aaKnown RBP8.89□□□□□ -0.99
CTDNEP1-202ENST00000570380 DEFB108BQ8NET1 73 aa8.89□□□□□ -0.99
CTDNEP1-202ENST00000570380 OR7A2PQ8NGA2 310 aa8.89□□□□□ -0.99
CTDNEP1-202ENST00000570380 RAB8BQ92930 207 aa8.89□□□□□ -0.99
CTDNEP1-202ENST00000570380 POP5Q969H6 163 aaKnown RBP8.89□□□□□ -0.99
CTDNEP1-202ENST00000570380 MTERF3Q96E29 417 aa8.89□□□□□ -0.99
CTDNEP1-202ENST00000570380 ZNF837Q96EG3 531 aaPredicted RBP8.89□□□□□ -0.99
CTDNEP1-202ENST00000570380 MS4A3Q96HJ5 214 aa8.89□□□□□ -0.99
CTDNEP1-202ENST00000570380 RBM4BQ9BQ04 359 aaKnown RBP8.89□□□□□ -0.99
CTDNEP1-202ENST00000570380 LINC00470Q9BZP3 86 aa8.89□□□□□ -0.99
CTDNEP1-202ENST00000570380 SLC35A3Q9Y2D2 325 aa8.89□□□□□ -0.99
CTDNEP1-202ENST00000570380 WIPI2Q9Y4P8 454 aa8.89□□□□□ -0.99
CTDNEP1-202ENST00000570380 PLXNB1O43157 2135 aa8.89□□□□□ -0.99
CTDNEP1-202ENST00000570380 LIPT2A6NK58 231 aa8.88□□□□□ -0.99
CTDNEP1-202ENST00000570380 AP3D1O14617 1153 aa8.88□□□□□ -0.99
CTDNEP1-202ENST00000570380 TIMM23O14925 209 aa8.88□□□□□ -0.99
CTDNEP1-202ENST00000570380 LAMP1P11279 417 aa8.88□□□□□ -0.99
CTDNEP1-202ENST00000570380 TACR3P29371 465 aa8.88□□□□□ -0.99
CTDNEP1-202ENST00000570380 PAFAH1B1P43034 410 aa8.88□□□□□ -0.99
CTDNEP1-202ENST00000570380 RAD52P43351 418 aa8.88□□□□□ -0.99
CTDNEP1-202ENST00000570380 HTR3AP46098 478 aa8.88□□□□□ -0.99
CTDNEP1-202ENST00000570380 SERPINB9P50453 376 aa8.88□□□□□ -0.99
CTDNEP1-202ENST00000570380 P2RY4P51582 365 aa8.88□□□□□ -0.99
CTDNEP1-202ENST00000570380 POLR2HP52434 150 aaKnown RBP8.88□□□□□ -0.99
CTDNEP1-202ENST00000570380 KRTAP10-3P60369 221 aa8.88□□□□□ -0.99
CTDNEP1-202ENST00000570380 CCL8P80075 99 aa8.88□□□□□ -0.99
CTDNEP1-202ENST00000570380 FXNQ16595 210 aa8.88□□□□□ -0.99
CTDNEP1-202ENST00000570380 ALKBH6Q3KRA9 238 aa8.88□□□□□ -0.99
CTDNEP1-202ENST00000570380 ARHGAP11BQ3KRB8 267 aa8.88□□□□□ -0.99
CTDNEP1-202ENST00000570380 SPDYE7PQ495Y7 208 aa8.88□□□□□ -0.99
CTDNEP1-202ENST00000570380 RFTN2Q52LD8 501 aaPredicted RBP8.88□□□□□ -0.99
CTDNEP1-202ENST00000570380 ARMCX4Q5H9R4 360 aa8.88□□□□□ -0.99
CTDNEP1-202ENST00000570380 ASPHD2Q6ICH7 369 aa8.88□□□□□ -0.99
CTDNEP1-202ENST00000570380 C16orf87Q6PH81 154 aa8.88□□□□□ -0.99
CTDNEP1-202ENST00000570380 BRICD5Q6PL45 260 aa8.88□□□□□ -0.99
CTDNEP1-202ENST00000570380 Q6ZPA2 131 aa8.88□□□□□ -0.99
CTDNEP1-202ENST00000570380 ZNF771Q7L3S4 317 aaPredicted RBP8.88□□□□□ -0.99
CTDNEP1-202ENST00000570380 HMGN2P46Q86SG4 172 aa8.88□□□□□ -0.99
CTDNEP1-202ENST00000570380 RETREG3Q86VR2 466 aa8.88□□□□□ -0.99
CTDNEP1-202ENST00000570380 TREML1Q86YW5 311 aa8.88□□□□□ -0.99
CTDNEP1-202ENST00000570380 SLC22A9Q8IVM8 553 aa8.88□□□□□ -0.99
CTDNEP1-202ENST00000570380 CCNYL1Q8N7R7 359 aa8.88□□□□□ -0.99
CTDNEP1-202ENST00000570380 OR2T11Q8NH01 316 aa8.88□□□□□ -0.99
CTDNEP1-202ENST00000570380 OR5AK3PQ8NH89 298 aa8.88□□□□□ -0.99
CTDNEP1-202ENST00000570380 DCAKDQ8WVC6 231 aa8.88□□□□□ -0.99
CTDNEP1-202ENST00000570380 OR5P2Q8WZ92 322 aa8.88□□□□□ -0.99
CTDNEP1-202ENST00000570380 UBE2FQ969M7 185 aa8.88□□□□□ -0.99
CTDNEP1-202ENST00000570380 ZG16BQ96DA0 208 aa8.88□□□□□ -0.99
CTDNEP1-202ENST00000570380 PAFAH2Q99487 392 aa8.88□□□□□ -0.99
CTDNEP1-202ENST00000570380 ZNF350Q9GZX5 532 aa8.88□□□□□ -0.99
CTDNEP1-202ENST00000570380 NINJ2Q9NZG7 142 aa8.88□□□□□ -0.99
CTDNEP1-202ENST00000570380 ATP6V1HQ9UI12 483 aa8.88□□□□□ -0.99
CTDNEP1-202ENST00000570380 DUSP13Q9UII6 198 aa8.88□□□□□ -0.99
CTDNEP1-202ENST00000570380 SOX21Q9Y651 276 aaPredicted RBP8.88□□□□□ -0.99
CTDNEP1-202ENST00000570380 SAR1BQ9Y6B6 198 aa8.88□□□□□ -0.99
CTDNEP1-202ENST00000570380 DOCK11Q5JSL3 2073 aa8.87□□□□□ -0.99
CTDNEP1-202ENST00000570380 A0A1B0GUS0 222 aa8.87□□□□□ -0.99
CTDNEP1-202ENST00000570380 A0A1W2PPW3 197 aa8.87□□□□□ -0.99
CTDNEP1-202ENST00000570380 CLDN24A6NM45 220 aa8.87□□□□□ -0.99
CTDNEP1-202ENST00000570380 RPL36A-HNRNPH2H7BZ11 118 aa8.87□□□□□ -0.99
CTDNEP1-202ENST00000570380 SLC28A1O00337 649 aa8.87□□□□□ -0.99
CTDNEP1-202ENST00000570380 SCAMP2O15127 329 aaKnown RBP8.87□□□□□ -0.99
CTDNEP1-202ENST00000570380 CRCPO75575 148 aa8.87□□□□□ -0.99
CTDNEP1-202ENST00000570380 C6orf47O95873 294 aa8.87□□□□□ -0.99
CTDNEP1-202ENST00000570380 AK1P00568 194 aa8.87□□□□□ -0.99
CTDNEP1-202ENST00000570380 GPIP06744 558 aa8.87□□□□□ -0.99
CTDNEP1-202ENST00000570380 MATN1P21941 496 aa8.87□□□□□ -0.99
CTDNEP1-202ENST00000570380 PHBP35232 272 aa8.87□□□□□ -0.99
CTDNEP1-202ENST00000570380 CRYBB2P43320 205 aa8.87□□□□□ -0.99
CTDNEP1-202ENST00000570380 CAPZA2P47755 286 aa8.87□□□□□ -0.99
CTDNEP1-202ENST00000570380 ATP4BP51164 291 aa8.87□□□□□ -0.99
CTDNEP1-202ENST00000570380 RPL38P63173 70 aaKnown RBP8.87□□□□□ -0.99
CTDNEP1-202ENST00000570380 TYW3Q6IPR3 259 aaKnown RBP8.87□□□□□ -0.99
CTDNEP1-202ENST00000570380 R3HCC1LQ7Z5L2 792 aaKnown RBP8.87□□□□□ -0.99
CTDNEP1-202ENST00000570380 ARFGAP2Q8N6H7 521 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms