RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.42□□□□□ -1.38
CNOT1-222ENST00000570139 DCAF12L2Q5VW00 463 aa6.42□□□□□ -1.38
CNOT1-222ENST00000570139 DBX2Q6ZNG2 339 aa6.42□□□□□ -1.38
CNOT1-222ENST00000570139 SLC16A12Q6ZSM3 486 aa6.42□□□□□ -1.38
CNOT1-222ENST00000570139 ZNF621Q6ZSS3 439 aa6.42□□□□□ -1.38
CNOT1-222ENST00000570139 ANKRD46Q86W74 232 aa6.42□□□□□ -1.38
CNOT1-222ENST00000570139 CALHM3Q86XJ0 350 aa6.42□□□□□ -1.38
CNOT1-222ENST00000570139 MSRB3Q8IXL7 192 aa6.42□□□□□ -1.38
CNOT1-222ENST00000570139 MICU2Q8IYU8 434 aa6.42□□□□□ -1.38
CNOT1-222ENST00000570139 LRRC25Q8N386 305 aaPredicted RBP6.42□□□□□ -1.38
CNOT1-222ENST00000570139 EID2Q8N6I1 236 aa6.42□□□□□ -1.38
CNOT1-222ENST00000570139 SEMA6DQ8NFY4 1073 aa6.42□□□□□ -1.38
CNOT1-222ENST00000570139 ZFP90Q8TF47 636 aa6.42□□□□□ -1.38
CNOT1-222ENST00000570139 NEURL3Q96EH8 262 aa6.42□□□□□ -1.38
CNOT1-222ENST00000570139 NSMCE2Q96MF7 247 aa6.42□□□□□ -1.38
CNOT1-222ENST00000570139 ZNF583Q96ND8 569 aa6.42□□□□□ -1.38
CNOT1-222ENST00000570139 OR1F2PQ96R84 312 aa6.42□□□□□ -1.38
CNOT1-222ENST00000570139 SLC39A3Q9BRY0 314 aa6.42□□□□□ -1.38
CNOT1-222ENST00000570139 SLC35A5Q9BS91 424 aa6.42□□□□□ -1.38
CNOT1-222ENST00000570139 POLDIP3Q9BY77 421 aaKnown RBP6.42□□□□□ -1.38
CNOT1-222ENST00000570139 AICDAQ9GZX7 198 aa6.42□□□□□ -1.38
CNOT1-222ENST00000570139 ARRDC1-AS1Q9H2J1 176 aa6.42□□□□□ -1.38
CNOT1-222ENST00000570139 LRRN3Q9H3W5 708 aa6.42□□□□□ -1.38
CNOT1-222ENST00000570139 YY1AP1Q9H869 796 aa6.42□□□□□ -1.38
CNOT1-222ENST00000570139 TPT1P8Q9HAU6 139 aa6.42□□□□□ -1.38
CNOT1-222ENST00000570139 C3orf14Q9HBI5 128 aa6.42□□□□□ -1.38
CNOT1-222ENST00000570139 TEX10Q9NXF1 929 aaPredicted RBP6.42□□□□□ -1.38
CNOT1-222ENST00000570139 SLC25A37Q9NYZ2 338 aa6.42□□□□□ -1.38
CNOT1-222ENST00000570139 MSRB1Q9NZV6 116 aa6.42□□□□□ -1.38
CNOT1-222ENST00000570139 C6orf203Q9P0P8 240 aaPredicted RBP6.42□□□□□ -1.38
CNOT1-222ENST00000570139 SH3BGRL2Q9UJC5 107 aa6.42□□□□□ -1.38
CNOT1-222ENST00000570139 SAMD4AQ9UPU9 718 aaKnown RBP6.42□□□□□ -1.38
CNOT1-222ENST00000570139 NAALAD2Q9Y3Q0 740 aa6.42□□□□□ -1.38
CNOT1-222ENST00000570139 ATG4BQ9Y4P1 393 aa6.42□□□□□ -1.38
CNOT1-222ENST00000570139 NEUROG3Q9Y4Z2 214 aa6.42□□□□□ -1.38
CNOT1-222ENST00000570139 CACNA1EQ15878 2313 aa6.42□□□□□ -1.38
CNOT1-222ENST00000570139 MDC1Q14676 2089 aaKnown RBP6.41□□□□□ -1.38
CNOT1-222ENST00000570139 ABCA7Q8IZY2 2146 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 LY6G6EA0A0G2JKS1 128 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 TCRBV3S1A0A5B6 114 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 A8MUI8 341 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 C4orf51C9J302 202 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 MS4A18H0YCH9 400 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 HSPA12AO43301 675 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 ZNF749O43361 778 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 B4GAT1O43505 415 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 OR2B3O76000 313 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 CPSF4O95639 269 aaKnown RBP6.41□□□□□ -1.38
CNOT1-222ENST00000570139 LDOC1O95751 146 aaPredicted RBP6.41□□□□□ -1.38
CNOT1-222ENST00000570139 C6orf47O95873 294 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 IFNA14P01570 189 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 ATP1B1P05026 303 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 FHP07954 510 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 ZNF806P0C7X5 589 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 SAGP10523 405 aaPredicted RBP6.41□□□□□ -1.38
CNOT1-222ENST00000570139 CDK4P11802 303 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 GCKP35557 465 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 CDKN2CP42773 168 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 NCBP2P52298 156 aaKnown RBP eCLIP6.41□□□□□ -1.38
CNOT1-222ENST00000570139 CASP9P55211 416 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 HSD17B7P56937 341 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 HBA1P69905 142 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 DLK1P80370 383 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 SLC34A1Q06495 639 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 PLA2G7Q13093 441 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 RCN1Q15293 331 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 ZNF630Q2M218 657 aaPredicted RBP6.41□□□□□ -1.38
CNOT1-222ENST00000570139 AMZ1Q400G9 498 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 IQCCQ4KMZ1 466 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 C18orf63Q68DL7 685 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 ANKRD26P1Q6NSI1 321 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 MFSD12Q6NUT3 480 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 GUSBP11Q6P575 273 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 NHLRC1Q6VVB1 395 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 MEPCEQ7L2J0 689 aaKnown RBP6.41□□□□□ -1.38
CNOT1-222ENST00000570139 SPATA24Q86W54 205 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 CLECL1Q8IZS7 167 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 CA13Q8N1Q1 262 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 RNF148Q8N7C7 305 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 CATSPER1Q8NEC5 780 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 OR4K14Q8NGD5 310 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 OR10A6Q8NH74 314 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 THAP6Q8TBB0 222 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 SLC26A7Q8TE54 656 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 RASSF5Q8WWW0 418 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 RIT1Q92963 219 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 EXOSC8Q96B26 276 aaKnown RBP6.41□□□□□ -1.38
CNOT1-222ENST00000570139 ZNF578Q96N58 590 aaPredicted RBP6.41□□□□□ -1.38
CNOT1-222ENST00000570139 AMDHD1Q96NU7 426 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 FCRL4Q96PJ5 515 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 SIGLEC11Q96RL6 698 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 MAPKAP1Q9BPZ7 522 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 UGT2B28Q9BY64 529 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 DPAGT1Q9H3H5 408 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 TMEM38AQ9H6F2 299 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 RPF2Q9H7B2 306 aaKnown RBP6.41□□□□□ -1.38
CNOT1-222ENST00000570139 SRD5A3Q9H8P0 318 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 S100A14Q9HCY8 104 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 FAM60AQ9NP50 221 aa6.41□□□□□ -1.38
CNOT1-222ENST00000570139 C8orf4Q9NR00 106 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms