RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 PYHIN1Q6K0P9 492 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 PWWP2BQ6NUJ5 590 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 C8orf82Q6P1X6 216 aaPredicted RBP2.8□□□□□ -1.96
CNOT1-221ENST00000569924 RFPL4BQ6ZWI9 263 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 C16orf62Q7Z3J2 963 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 YTHDF3Q7Z739 585 aaKnown RBP2.8□□□□□ -1.96
CNOT1-221ENST00000569924 TMEM135Q86UB9 458 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 C17orf64Q86WR6 236 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 PHC2Q8IXK0 858 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 LRRC75A-AS1Q8N1F1 130 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 UBE2J2Q8N2K1 259 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 MUC20Q8N307 709 aaPredicted RBP2.8□□□□□ -1.96
CNOT1-221ENST00000569924 TRAM1L1Q8N609 369 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 PRR26Q8N8Z3 221 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 ZNF114Q8NC26 417 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 CCDC197Q8NCU1 140 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 BBOF1Q8ND07 529 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 OR2T12Q8NG77 320 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 PNPLA2Q96AD5 504 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 SLC25A36Q96CQ1 311 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 C10orf90Q96M02 699 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 TGM7Q96PF1 710 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 CSPG4P5Q96PW8 444 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 SMIM14Q96QK8 99 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 SLC39A3Q9BRY0 314 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 TIMM29Q9BSF4 260 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 ERVK-6Q9BXR3 956 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 KRTAP4-2Q9BYR5 136 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 SLC29A3Q9BZD2 475 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 FAM192AQ9GZU8 254 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 SHARPINQ9H0F6 387 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 WWP1Q9H0M0 922 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 MAGT1Q9H0U3 335 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 CSTL1Q9H114 145 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 OR2AG1Q9H205 316 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 EGLN3Q9H6Z9 239 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 EXO5Q9H790 373 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 EVA1AQ9H8M9 152 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 FKRPQ9H9S5 495 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 MEAF6Q9HAF1 191 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 FANCEQ9HB96 536 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 LPAR2Q9HBW0 351 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 MRPL47Q9HD33 250 aaKnown RBP2.8□□□□□ -1.96
CNOT1-221ENST00000569924 SLC40A1Q9NP59 571 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 NT5MQ9NPB1 228 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 LHX9Q9NQ69 397 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 POT1Q9NUX5 634 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 RCOR3Q9P2K3 495 aaPredicted RBP2.8□□□□□ -1.96
CNOT1-221ENST00000569924 LNPEPQ9UIQ6 1025 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 PRDM4Q9UKN5 801 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 RARRES3Q9UL19 164 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 VDAC3Q9Y277 283 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 KLHDC2Q9Y2U9 406 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 ZNF175Q9Y473 711 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 LRP12Q9Y561 859 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 CELSR2Q9HCU4 2923 aa2.8□□□□□ -1.96
CNOT1-221ENST00000569924 TNRC6AQ8NDV7 1962 aaKnown RBP2.8□□□□□ -1.96
CNOT1-221ENST00000569924 DIDO1Q9BTC0 2240 aaKnown RBP2.79□□□□□ -1.96
CNOT1-221ENST00000569924 IGLV5-37A0A075B6J1 123 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 C1orf232A0A0U1RR37 186 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 TLCD2A6NGC4 264 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 ARGFXA6NJG6 315 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 PDZK1P1A8MUH7 402 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 TMCO5BA8MYB1 307 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 TCP11X1B4DZS4 312 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 TNFRSF13BO14836 293 aaPredicted RBP2.79□□□□□ -1.96
CNOT1-221ENST00000569924 P2RX6O15547 441 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 LRRTM2O43300 516 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 MFSD11O43934 449 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 LCMT2O60294 686 aaKnown RBP2.79□□□□□ -1.96
CNOT1-221ENST00000569924 WBP4O75554 376 aaKnown RBP2.79□□□□□ -1.96
CNOT1-221ENST00000569924 SLC25A14O95258 325 aaPredicted RBP2.79□□□□□ -1.96
CNOT1-221ENST00000569924 ANP32DO95626 131 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 PMS2P2O95744 297 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 JCHAINP01591 159 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 ANXA4P09525 319 aaPredicted RBP2.79□□□□□ -1.96
CNOT1-221ENST00000569924 RNF224P0DH78 156 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 FOLR1P15328 257 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 TSPAN8P19075 237 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 NT5EP21589 574 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 IDSP22304 550 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 UQCRC2P22695 453 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 GLRA1P23415 457 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 CTNNA2P26232 953 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 CYLC1P35663 651 aaPredicted RBP2.79□□□□□ -1.96
CNOT1-221ENST00000569924 GAS1P54826 345 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 HERV-K104P61576 105 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 CDKL1Q00532 357 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 MYL5Q02045 173 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 SLC25A11Q02978 314 aaKnown RBP2.79□□□□□ -1.96
CNOT1-221ENST00000569924 PJVKQ0ZLH3 352 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 BST1Q10588 318 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 PIGHQ14442 188 aaPredicted RBP2.79□□□□□ -1.96
CNOT1-221ENST00000569924 PAFAH1B3Q15102 231 aaKnown RBP2.79□□□□□ -1.96
CNOT1-221ENST00000569924 P2RY14Q15391 338 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 RBMS2Q15434 407 aaKnown RBP2.79□□□□□ -1.96
CNOT1-221ENST00000569924 TAF13Q15543 124 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 CHRNA6Q15825 494 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 PCK2Q16822 640 aa2.79□□□□□ -1.96
CNOT1-221ENST00000569924 PARP6Q2NL67 630 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms