RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 ITGA5P08648 1049 aa11.52□□□□□ -0.57
SPG7-221ENST00000569720 ZCCHC18P0CG32 403 aa11.52□□□□□ -0.57
SPG7-221ENST00000569720 IMPDH2P12268 514 aa11.52□□□□□ -0.57
SPG7-221ENST00000569720 CALB2P22676 271 aa11.52□□□□□ -0.57
SPG7-221ENST00000569720 PPIBP23284 216 aaKnown RBP11.52□□□□□ -0.57
SPG7-221ENST00000569720 CXCR1P25024 350 aa11.52□□□□□ -0.57
SPG7-221ENST00000569720 NTF4P34130 210 aa11.52□□□□□ -0.57
SPG7-221ENST00000569720 SPOCK1Q08629 439 aa11.52□□□□□ -0.57
SPG7-221ENST00000569720 SLC17A1Q14916 467 aa11.52□□□□□ -0.57
SPG7-221ENST00000569720 CHRFAM7AQ494W8 412 aa11.52□□□□□ -0.57
SPG7-221ENST00000569720 MRPL2Q5T653 305 aaKnown RBP11.52□□□□□ -0.57
SPG7-221ENST00000569720 C9orf135Q5VTT2 229 aa11.52□□□□□ -0.57
SPG7-221ENST00000569720 C11orf71Q6IPW1 123 aa11.52□□□□□ -0.57
SPG7-221ENST00000569720 PAQR6Q6TCH4 344 aa11.52□□□□□ -0.57
SPG7-221ENST00000569720 KLHL24Q6TFL4 600 aa11.52□□□□□ -0.57
SPG7-221ENST00000569720 HACD2Q6Y1H2 254 aa11.52□□□□□ -0.57
SPG7-221ENST00000569720 ABHD12BQ7Z5M8 362 aaPredicted RBP11.52□□□□□ -0.57
SPG7-221ENST00000569720 FUNDC1Q8IVP5 155 aa11.52□□□□□ -0.57
SPG7-221ENST00000569720 PEX5LQ8IYB4 626 aa11.52□□□□□ -0.57
SPG7-221ENST00000569720 FITM2Q8N6M3 262 aa11.52□□□□□ -0.57
SPG7-221ENST00000569720 SH3GL1Q99961 368 aa11.52□□□□□ -0.57
SPG7-221ENST00000569720 C1QTNF6Q9BXI9 259 aa11.52□□□□□ -0.57
SPG7-221ENST00000569720 AMBRA1Q9C0C7 1298 aa11.52□□□□□ -0.57
SPG7-221ENST00000569720 SLC17A5Q9NRA2 495 aa11.52□□□□□ -0.57
SPG7-221ENST00000569720 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.52□□□□□ -0.57
SPG7-221ENST00000569720 TAGLN3Q9UI15 199 aa11.52□□□□□ -0.57
SPG7-221ENST00000569720 PMF1-BGLAPU3KQ54 211 aa11.52□□□□□ -0.57
SPG7-221ENST00000569720 YLPM1P49750 1951 aaKnown RBP11.52□□□□□ -0.57
SPG7-221ENST00000569720 IGHV4-30-2A0A087WSY4 118 aa11.51□□□□□ -0.57
SPG7-221ENST00000569720 PDLIM1O00151 329 aa11.51□□□□□ -0.57
SPG7-221ENST00000569720 SLC25A16P16260 332 aa11.51□□□□□ -0.57
SPG7-221ENST00000569720 RPS4Y1P22090 263 aaKnown RBP11.51□□□□□ -0.57
SPG7-221ENST00000569720 MPGP29372 298 aa11.51□□□□□ -0.57
SPG7-221ENST00000569720 FOXG1P55316 489 aaPredicted RBP11.51□□□□□ -0.57
SPG7-221ENST00000569720 PRPS1P60891 318 aa11.51□□□□□ -0.57
SPG7-221ENST00000569720 COPZ1P61923 177 aa11.51□□□□□ -0.57
SPG7-221ENST00000569720 PLAURQ03405 335 aa11.51□□□□□ -0.57
SPG7-221ENST00000569720 EPS8Q12929 822 aa11.51□□□□□ -0.57
SPG7-221ENST00000569720 MMEL1Q495T6 779 aa11.51□□□□□ -0.57
SPG7-221ENST00000569720 OTUD3Q5T2D3 398 aaPredicted RBP11.51□□□□□ -0.57
SPG7-221ENST00000569720 TSPO2Q5TGU0 170 aa11.51□□□□□ -0.57
SPG7-221ENST00000569720 C6orf89Q6UWU4 347 aa11.51□□□□□ -0.57
SPG7-221ENST00000569720 POMGNT2Q8NAT1 580 aa11.51□□□□□ -0.57
SPG7-221ENST00000569720 OR10H5Q8NGA6 315 aa11.51□□□□□ -0.57
SPG7-221ENST00000569720 TMEM45BQ96B21 275 aa11.51□□□□□ -0.57
SPG7-221ENST00000569720 NSL1Q96IY1 281 aa11.51□□□□□ -0.57
SPG7-221ENST00000569720 TEX37Q96LM6 180 aa11.51□□□□□ -0.57
SPG7-221ENST00000569720 TNFRSF13CQ96RJ3 184 aa11.51□□□□□ -0.57
SPG7-221ENST00000569720 HOPXQ9BPY8 73 aaPredicted RBP11.51□□□□□ -0.57
SPG7-221ENST00000569720 SF3B5Q9BWJ5 86 aaKnown RBP11.51□□□□□ -0.57
SPG7-221ENST00000569720 TAPBPLQ9BX59 468 aa11.51□□□□□ -0.57
SPG7-221ENST00000569720 C1orf21Q9H246 121 aa11.51□□□□□ -0.57
SPG7-221ENST00000569720 PIF1Q9H611 641 aa11.51□□□□□ -0.57
SPG7-221ENST00000569720 CACYBPQ9HB71 228 aaKnown RBP11.51□□□□□ -0.57
SPG7-221ENST00000569720 SLC7A10Q9NS82 523 aa11.51□□□□□ -0.57
SPG7-221ENST00000569720 CALML5Q9NZT1 146 aa11.51□□□□□ -0.57
SPG7-221ENST00000569720 CORO2BQ9UQ03 480 aa11.51□□□□□ -0.57
SPG7-221ENST00000569720 ZC3H12DA2A288 527 aaKnown RBP11.5□□□□□ -0.57
SPG7-221ENST00000569720 ELOA3DA6NLF2 546 aaPredicted RBP11.5□□□□□ -0.57
SPG7-221ENST00000569720 H7C417 338 aa11.5□□□□□ -0.57
SPG7-221ENST00000569720 RFXANKO14593 260 aa11.5□□□□□ -0.57
SPG7-221ENST00000569720 KRT33AO76009 404 aa11.5□□□□□ -0.57
SPG7-221ENST00000569720 GSNP06396 782 aa11.5□□□□□ -0.57
SPG7-221ENST00000569720 CSF3P09919 207 aa11.5□□□□□ -0.57
SPG7-221ENST00000569720 COX4I1P13073 169 aa11.5□□□□□ -0.57
SPG7-221ENST00000569720 IL12AP29459 219 aa11.5□□□□□ -0.57
SPG7-221ENST00000569720 APOBEC3AP31941 199 aaPredicted RBP11.5□□□□□ -0.57
SPG7-221ENST00000569720 CDKN2CP42773 168 aa11.5□□□□□ -0.57
SPG7-221ENST00000569720 LOXL1Q08397 574 aaPredicted RBP11.5□□□□□ -0.57
SPG7-221ENST00000569720 CEACAM7Q14002 265 aa11.5□□□□□ -0.57
SPG7-221ENST00000569720 OR7A5Q15622 319 aa11.5□□□□□ -0.57
SPG7-221ENST00000569720 ZSWIM7Q19AV6 140 aa11.5□□□□□ -0.57
SPG7-221ENST00000569720 TMEM249Q2WGJ8 235 aa11.5□□□□□ -0.57
SPG7-221ENST00000569720 ELOA3BQ3SY89 546 aa11.5□□□□□ -0.57
SPG7-221ENST00000569720 SPATS1Q496A3 300 aa11.5□□□□□ -0.57
SPG7-221ENST00000569720 LIN52Q52LA3 116 aa11.5□□□□□ -0.57
SPG7-221ENST00000569720 B3GLCTQ6Y288 498 aa11.5□□□□□ -0.57
SPG7-221ENST00000569720 AAED1Q7RTV5 226 aa11.5□□□□□ -0.57
SPG7-221ENST00000569720 WDR31Q8NA23 367 aa11.5□□□□□ -0.57
SPG7-221ENST00000569720 ELOA3Q8NG57 546 aa11.5□□□□□ -0.57
SPG7-221ENST00000569720 OR9K2Q8NGE7 335 aa11.5□□□□□ -0.57
SPG7-221ENST00000569720 PNPT1Q8TCS8 783 aaKnown RBP11.5□□□□□ -0.57
SPG7-221ENST00000569720 FAM168AQ92567 244 aa11.5□□□□□ -0.57
SPG7-221ENST00000569720 REPIN1Q9BWE0 567 aaKnown RBP11.5□□□□□ -0.57
SPG7-221ENST00000569720 ADAM19Q9H013 955 aa11.5□□□□□ -0.57
SPG7-221ENST00000569720 RAD21L1Q9H4I0 556 aa11.5□□□□□ -0.57
SPG7-221ENST00000569720 ARMC7Q9H6L4 198 aa11.5□□□□□ -0.57
SPG7-221ENST00000569720 SLC52A3Q9NQ40 469 aa11.5□□□□□ -0.57
SPG7-221ENST00000569720 THUMPD1Q9NXG2 353 aaKnown RBP11.5□□□□□ -0.57
SPG7-221ENST00000569720 P2RX2Q9UBL9 471 aa11.5□□□□□ -0.57
SPG7-221ENST00000569720 STAB1Q9NY15 2570 aa11.49□□□□□ -0.57
SPG7-221ENST00000569720 A0A096LPI6 279 aa11.49□□□□□ -0.57
SPG7-221ENST00000569720 TMEM247A6NEH6 219 aa11.49□□□□□ -0.57
SPG7-221ENST00000569720 LIPT2A6NK58 231 aa11.49□□□□□ -0.57
SPG7-221ENST00000569720 AQP7P3A6NL99 342 aa11.49□□□□□ -0.57
SPG7-221ENST00000569720 RNF212BA8MTL3 300 aa11.49□□□□□ -0.57
SPG7-221ENST00000569720 GPRIN2O60269 458 aa11.49□□□□□ -0.57
SPG7-221ENST00000569720 AKR7A3O95154 331 aa11.49□□□□□ -0.57
SPG7-221ENST00000569720 VAMP5O95183 116 aa11.49□□□□□ -0.57
SPG7-221ENST00000569720 ANP32DO95626 131 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms