RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 PCDHB14Q9Y5E9 798 aa12.1□□□□□ -0.47
GTF3C1-211ENST00000569653 NR5A2O00482 541 aa12.09□□□□□ -0.47
GTF3C1-211ENST00000569653 UPK3AO75631 287 aa12.09□□□□□ -0.47
GTF3C1-211ENST00000569653 GPIP06744 558 aa12.09□□□□□ -0.47
GTF3C1-211ENST00000569653 CDH2P19022 906 aaPredicted RBP12.09□□□□□ -0.47
GTF3C1-211ENST00000569653 CXCR1P25024 350 aa12.09□□□□□ -0.47
GTF3C1-211ENST00000569653 HTR2AP28223 471 aa12.09□□□□□ -0.47
GTF3C1-211ENST00000569653 MPGP29372 298 aa12.09□□□□□ -0.47
GTF3C1-211ENST00000569653 MDH1P40925 334 aaKnown RBP12.09□□□□□ -0.47
GTF3C1-211ENST00000569653 CRISP3P54108 245 aa12.09□□□□□ -0.47
GTF3C1-211ENST00000569653 RGNQ15493 299 aa12.09□□□□□ -0.47
GTF3C1-211ENST00000569653 MST1LQ2TV78 715 aa12.09□□□□□ -0.47
GTF3C1-211ENST00000569653 C1orf140Q5VVS0 124 aa12.09□□□□□ -0.47
GTF3C1-211ENST00000569653 AGAP6Q5VW22 663 aa12.09□□□□□ -0.47
GTF3C1-211ENST00000569653 OR7E24Q6IFN5 339 aa12.09□□□□□ -0.47
GTF3C1-211ENST00000569653 BLOC1S3Q6QNY0 202 aa12.09□□□□□ -0.47
GTF3C1-211ENST00000569653 CREB3L2Q70SY1 520 aa12.09□□□□□ -0.47
GTF3C1-211ENST00000569653 AAED1Q7RTV5 226 aa12.09□□□□□ -0.47
GTF3C1-211ENST00000569653 MYPOPQ86VE0 399 aaPredicted RBP12.09□□□□□ -0.47
GTF3C1-211ENST00000569653 WDFY1Q8IWB7 410 aa12.09□□□□□ -0.47
GTF3C1-211ENST00000569653 ZNF440Q8IYI8 595 aa12.09□□□□□ -0.47
GTF3C1-211ENST00000569653 KDM8Q8N371 416 aa12.09□□□□□ -0.47
GTF3C1-211ENST00000569653 MUC15Q8N387 334 aa12.09□□□□□ -0.47
GTF3C1-211ENST00000569653 ZNF525Q8N782 197 aa12.09□□□□□ -0.47
GTF3C1-211ENST00000569653 SPDL1Q96EA4 605 aa12.09□□□□□ -0.47
GTF3C1-211ENST00000569653 THOC1Q96FV9 657 aaKnown RBP12.09□□□□□ -0.47
GTF3C1-211ENST00000569653 ALKBH3Q96Q83 286 aaPredicted RBP12.09□□□□□ -0.47
GTF3C1-211ENST00000569653 WFDC6Q9BQY6 131 aa12.09□□□□□ -0.47
GTF3C1-211ENST00000569653 PRR14Q9BWN1 585 aa12.09□□□□□ -0.47
GTF3C1-211ENST00000569653 SPATA9Q9BWV2 254 aa12.09□□□□□ -0.47
GTF3C1-211ENST00000569653 ALG2Q9H553 416 aa12.09□□□□□ -0.47
GTF3C1-211ENST00000569653 IKZF5Q9H5V7 419 aa12.09□□□□□ -0.47
GTF3C1-211ENST00000569653 A4GALTQ9NPC4 353 aa12.09□□□□□ -0.47
GTF3C1-211ENST00000569653 THUMPD1Q9NXG2 353 aaKnown RBP12.09□□□□□ -0.47
GTF3C1-211ENST00000569653 FAM53CQ9NYF3 392 aa12.09□□□□□ -0.47
GTF3C1-211ENST00000569653 CCDC167Q9P0B6 97 aa12.09□□□□□ -0.47
GTF3C1-211ENST00000569653 B3GAT1Q9P2W7 334 aa12.09□□□□□ -0.47
GTF3C1-211ENST00000569653 UPB1Q9UBR1 384 aa12.09□□□□□ -0.47
GTF3C1-211ENST00000569653 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.08□□□□□ -0.488e-7■■■■□ 22.9
GTF3C1-211ENST00000569653 IGKV1D-42A0A075B6H8 117 aa12.08□□□□□ -0.48
GTF3C1-211ENST00000569653 A0A096LPI6 279 aa12.08□□□□□ -0.48
GTF3C1-211ENST00000569653 TRBV5-3A0A0A0MS03 114 aa12.08□□□□□ -0.48
GTF3C1-211ENST00000569653 IGHV1-18A0A0C4DH31 117 aa12.08□□□□□ -0.48
GTF3C1-211ENST00000569653 A0A0G2JND7 137 aa12.08□□□□□ -0.48
GTF3C1-211ENST00000569653 A8MVM7 634 aa12.08□□□□□ -0.48
GTF3C1-211ENST00000569653 CD5LO43866 347 aa12.08□□□□□ -0.48
GTF3C1-211ENST00000569653 TPST1O60507 370 aa12.08□□□□□ -0.48
GTF3C1-211ENST00000569653 FZD7O75084 574 aa12.08□□□□□ -0.48
GTF3C1-211ENST00000569653 LGI1O95970 557 aa12.08□□□□□ -0.48
GTF3C1-211ENST00000569653 TROVE2P10155 538 aaKnown RBP eCLIP12.08□□□□□ -0.48
GTF3C1-211ENST00000569653 FABP6P51161 128 aa12.08□□□□□ -0.48
GTF3C1-211ENST00000569653 MAP2K6P52564 334 aa12.08□□□□□ -0.48
GTF3C1-211ENST00000569653 GYS2P54840 703 aa12.08□□□□□ -0.48
GTF3C1-211ENST00000569653 TUBA1BP68363 451 aa12.08□□□□□ -0.48
GTF3C1-211ENST00000569653 TUBA4AP68366 448 aa12.08□□□□□ -0.48
GTF3C1-211ENST00000569653 GNA13Q14344 377 aa12.08□□□□□ -0.48
GTF3C1-211ENST00000569653 GLIPR1L2Q4G1C9 344 aa12.08□□□□□ -0.48
GTF3C1-211ENST00000569653 CGB2Q6NT52 195 aa12.08□□□□□ -0.48
GTF3C1-211ENST00000569653 KLHL17Q6TDP4 642 aa12.08□□□□□ -0.48
GTF3C1-211ENST00000569653 TUBA1AQ71U36 451 aa12.08□□□□□ -0.48
GTF3C1-211ENST00000569653 SSX8Q7RTT4 187 aa12.08□□□□□ -0.48
GTF3C1-211ENST00000569653 GPAT4Q86UL3 456 aa12.08□□□□□ -0.48
GTF3C1-211ENST00000569653 C17orf78Q8N4C9 275 aa12.08□□□□□ -0.48
GTF3C1-211ENST00000569653 BCL2L2Q92843 193 aaPredicted RBP12.08□□□□□ -0.48
GTF3C1-211ENST00000569653 KTI12Q96EK9 354 aaPredicted RBP12.08□□□□□ -0.48
GTF3C1-211ENST00000569653 BOD1Q96IK1 185 aa12.08□□□□□ -0.48
GTF3C1-211ENST00000569653 RADILQ96JH8 1075 aa12.08□□□□□ -0.48
GTF3C1-211ENST00000569653 SF3B5Q9BWJ5 86 aaKnown RBP12.08□□□□□ -0.48
GTF3C1-211ENST00000569653 RAD21L1Q9H4I0 556 aa12.08□□□□□ -0.48
GTF3C1-211ENST00000569653 BCL2L10Q9HD36 194 aa12.08□□□□□ -0.48
GTF3C1-211ENST00000569653 FAIMQ9NVQ4 179 aa12.08□□□□□ -0.48
GTF3C1-211ENST00000569653 PARPBPQ9NWS1 579 aa12.08□□□□□ -0.48
GTF3C1-211ENST00000569653 CALML5Q9NZT1 146 aa12.08□□□□□ -0.48
GTF3C1-211ENST00000569653 POU2F3Q9UKI9 436 aa12.08□□□□□ -0.48
GTF3C1-211ENST00000569653 MOKQ9UQ07 419 aa12.08□□□□□ -0.48
GTF3C1-211ENST00000569653 MGAT4BQ9UQ53 548 aa12.08□□□□□ -0.48
GTF3C1-211ENST00000569653 AMDHD2Q9Y303 409 aa12.08□□□□□ -0.48
GTF3C1-211ENST00000569653 ATP23Q9Y6H3 246 aa12.08□□□□□ -0.48
GTF3C1-211ENST00000569653 A0A0G2JPF8 293 aa12.07□□□□□ -0.48
GTF3C1-211ENST00000569653 TMEM247A6NEH6 219 aa12.07□□□□□ -0.48
GTF3C1-211ENST00000569653 ZNF503-AS2A6NEH8 195 aa12.07□□□□□ -0.48
GTF3C1-211ENST00000569653 HNRNPCL2B2RXH8 293 aa12.07□□□□□ -0.48
GTF3C1-211ENST00000569653 HNRNPCL3B7ZW38 293 aa12.07□□□□□ -0.48
GTF3C1-211ENST00000569653 H7C417 338 aa12.07□□□□□ -0.48
GTF3C1-211ENST00000569653 CLIC1O00299 241 aa12.07□□□□□ -0.48
GTF3C1-211ENST00000569653 HNRNPCL1O60812 293 aaKnown RBP12.07□□□□□ -0.48
GTF3C1-211ENST00000569653 ZNF432O94892 652 aa12.07□□□□□ -0.48
GTF3C1-211ENST00000569653 HNRNPCL4P0DMR1 293 aa12.07□□□□□ -0.48
GTF3C1-211ENST00000569653 PNMTP11086 282 aa12.07□□□□□ -0.48
GTF3C1-211ENST00000569653 NCF2P19878 526 aaPredicted RBP12.07□□□□□ -0.48
GTF3C1-211ENST00000569653 NUDT6P53370 316 aa12.07□□□□□ -0.48
GTF3C1-211ENST00000569653 TBRG1Q3YBR2 411 aa12.07□□□□□ -0.48
GTF3C1-211ENST00000569653 AGKQ53H12 422 aa12.07□□□□□ -0.48
GTF3C1-211ENST00000569653 PAGE3Q5JUK9 113 aa12.07□□□□□ -0.48
GTF3C1-211ENST00000569653 OR1K1Q8NGR3 316 aa12.07□□□□□ -0.48
GTF3C1-211ENST00000569653 ZNF837Q96EG3 531 aaPredicted RBP12.07□□□□□ -0.48
GTF3C1-211ENST00000569653 ZNF317Q96PQ6 595 aaPredicted RBP12.07□□□□□ -0.48
GTF3C1-211ENST00000569653 BARX1Q9HBU1 254 aaPredicted RBP12.07□□□□□ -0.48
GTF3C1-211ENST00000569653 VAPAQ9P0L0 249 aa12.07□□□□□ -0.48
GTF3C1-211ENST00000569653 ELOA3DA6NLF2 546 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms