RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 ARL2BPQ9Y2Y0 163 aa12.22□□□□□ -0.45
HERPUD1-218ENST00000569569 SH3GLB1Q9Y371 365 aa12.22□□□□□ -0.45
HERPUD1-218ENST00000569569 CPSF4LA6NMK7 179 aaKnown RBP12.21□□□□□ -0.45
HERPUD1-218ENST00000569569 DEFB108AA8MXU0 73 aa12.21□□□□□ -0.45
HERPUD1-218ENST00000569569 CHP2O43745 196 aa12.21□□□□□ -0.45
HERPUD1-218ENST00000569569 FZD7O75084 574 aa12.21□□□□□ -0.45
HERPUD1-218ENST00000569569 IGHV1-2P23083 117 aa12.21□□□□□ -0.45
HERPUD1-218ENST00000569569 DNAJA1P31689 397 aaKnown RBP12.21□□□□□ -0.45
HERPUD1-218ENST00000569569 SLC7A2P52569 658 aa12.21□□□□□ -0.45
HERPUD1-218ENST00000569569 LIPEQ05469 1076 aa12.21□□□□□ -0.45
HERPUD1-218ENST00000569569 MFSD13AQ14CX5 517 aa12.21□□□□□ -0.45
HERPUD1-218ENST00000569569 TSC22D1Q15714 1073 aa12.21□□□□□ -0.45
HERPUD1-218ENST00000569569 LRRC23Q53EV4 343 aaPredicted RBP12.21□□□□□ -0.45
HERPUD1-218ENST00000569569 CASP12Q6UXS9 341 aa12.21□□□□□ -0.45
HERPUD1-218ENST00000569569 LINC00114Q6XXX2 140 aa12.21□□□□□ -0.45
HERPUD1-218ENST00000569569 BHLHA15Q7RTS1 189 aaPredicted RBP12.21□□□□□ -0.45
HERPUD1-218ENST00000569569 ZIC4Q8N9L1 334 aa12.21□□□□□ -0.45
HERPUD1-218ENST00000569569 ADAMTS16Q8TE57 1224 aa12.21□□□□□ -0.45
HERPUD1-218ENST00000569569 HSD17B8Q92506 261 aa12.21□□□□□ -0.45
HERPUD1-218ENST00000569569 NRGNQ92686 78 aa12.21□□□□□ -0.45
HERPUD1-218ENST00000569569 TMEM43Q9BTV4 400 aa12.21□□□□□ -0.45
HERPUD1-218ENST00000569569 PCDHAC1Q9H158 963 aa12.21□□□□□ -0.45
HERPUD1-218ENST00000569569 PLEKHF2Q9H8W4 249 aa12.21□□□□□ -0.45
HERPUD1-218ENST00000569569 ASB6Q9NWX5 421 aa12.21□□□□□ -0.45
HERPUD1-218ENST00000569569 TRAPPC13A5PLN9 417 aa12.2□□□□□ -0.46
HERPUD1-218ENST00000569569 ENO4A6NNW6 628 aa12.2□□□□□ -0.46
HERPUD1-218ENST00000569569 NME4O00746 187 aa12.2□□□□□ -0.46
HERPUD1-218ENST00000569569 SIAH2O43255 324 aa12.2□□□□□ -0.46
HERPUD1-218ENST00000569569 DCTN3O75935 186 aa12.2□□□□□ -0.46
HERPUD1-218ENST00000569569 LYZL6O75951 148 aa12.2□□□□□ -0.46
HERPUD1-218ENST00000569569 IGHV3-9P01782 118 aa12.2□□□□□ -0.46
HERPUD1-218ENST00000569569 COX5AP20674 150 aa12.2□□□□□ -0.46
HERPUD1-218ENST00000569569 PSME3P61289 254 aa12.2□□□□□ -0.46
HERPUD1-218ENST00000569569 SELENOWP63302 87 aa12.2□□□□□ -0.46
HERPUD1-218ENST00000569569 CYBRD1Q53TN4 286 aa12.2□□□□□ -0.46
HERPUD1-218ENST00000569569 BEX5Q5H9J7 111 aa12.2□□□□□ -0.46
HERPUD1-218ENST00000569569 CREB3L2Q70SY1 520 aa12.2□□□□□ -0.46
HERPUD1-218ENST00000569569 H1FNTQ75WM6 255 aaPredicted RBP12.2□□□□□ -0.46
HERPUD1-218ENST00000569569 AAED1Q7RTV5 226 aa12.2□□□□□ -0.46
HERPUD1-218ENST00000569569 CARM1Q86X55 608 aa12.2□□□□□ -0.46
HERPUD1-218ENST00000569569 P3H2Q8IVL5 708 aa12.2□□□□□ -0.46
HERPUD1-218ENST00000569569 ZNF433Q8N7K0 673 aaPredicted RBP12.2□□□□□ -0.46
HERPUD1-218ENST00000569569 NINJ1Q92982 152 aa12.2□□□□□ -0.46
HERPUD1-218ENST00000569569 PIK3IP1Q96FE7 263 aa12.2□□□□□ -0.46
HERPUD1-218ENST00000569569 MPP4Q96JB8 637 aa12.2□□□□□ -0.46
HERPUD1-218ENST00000569569 OXGR1Q96P68 337 aa12.2□□□□□ -0.46
HERPUD1-218ENST00000569569 ZNF385AQ96PM9 386 aaKnown RBP12.2□□□□□ -0.46
HERPUD1-218ENST00000569569 LRRC37BQ96QE4 947 aa12.2□□□□□ -0.46
HERPUD1-218ENST00000569569 LIME1Q9H400 295 aa12.2□□□□□ -0.46
HERPUD1-218ENST00000569569 ALG2Q9H553 416 aa12.2□□□□□ -0.46
HERPUD1-218ENST00000569569 OCEL1Q9H607 264 aa12.2□□□□□ -0.46
HERPUD1-218ENST00000569569 UPB1Q9UBR1 384 aa12.2□□□□□ -0.46
HERPUD1-218ENST00000569569 MALT1Q9UDY8 824 aa12.2□□□□□ -0.46
HERPUD1-218ENST00000569569 ST6GALNAC2Q9UJ37 374 aa12.2□□□□□ -0.46
HERPUD1-218ENST00000569569 ITGB1BP2Q9UKP3 347 aa12.2□□□□□ -0.46
HERPUD1-218ENST00000569569 B3GALT5Q9Y2C3 310 aa12.2□□□□□ -0.46
HERPUD1-218ENST00000569569 CORINQ9Y5Q5 1042 aa12.2□□□□□ -0.46
HERPUD1-218ENST00000569569 RAI1Q7Z5J4 1906 aaPredicted RBP12.19□□□□□ -0.46
HERPUD1-218ENST00000569569 A0A1W2PPR1 153 aa12.19□□□□□ -0.46
HERPUD1-218ENST00000569569 M0R082 166 aa12.19□□□□□ -0.46
HERPUD1-218ENST00000569569 GSTA4O15217 222 aa12.19□□□□□ -0.46
HERPUD1-218ENST00000569569 KLF4O43474 513 aa12.19□□□□□ -0.46
HERPUD1-218ENST00000569569 THY1P04216 161 aa12.19□□□□□ -0.46
HERPUD1-218ENST00000569569 ZNF43P17038 809 aa12.19□□□□□ -0.46
HERPUD1-218ENST00000569569 GRPRP30550 384 aa12.19□□□□□ -0.46
HERPUD1-218ENST00000569569 LTBQ06643 244 aa12.19□□□□□ -0.46
HERPUD1-218ENST00000569569 FAPQ12884 760 aa12.19□□□□□ -0.46
HERPUD1-218ENST00000569569 TAB1Q15750 504 aa12.19□□□□□ -0.46
HERPUD1-218ENST00000569569 TTC33Q6PID6 262 aaPredicted RBP12.19□□□□□ -0.46
HERPUD1-218ENST00000569569 SSX8Q7RTT4 187 aa12.19□□□□□ -0.46
HERPUD1-218ENST00000569569 P2RY8Q86VZ1 359 aa12.19□□□□□ -0.46
HERPUD1-218ENST00000569569 WFDC8Q8IUA0 241 aa12.19□□□□□ -0.46
HERPUD1-218ENST00000569569 EPHX4Q8IUS5 362 aa12.19□□□□□ -0.46
HERPUD1-218ENST00000569569 KDM8Q8N371 416 aa12.19□□□□□ -0.46
HERPUD1-218ENST00000569569 ANKS4BQ8N8V4 417 aa12.19□□□□□ -0.46
HERPUD1-218ENST00000569569 POMGNT2Q8NAT1 580 aa12.19□□□□□ -0.46
HERPUD1-218ENST00000569569 ADPRHL1Q8NDY3 354 aa12.19□□□□□ -0.46
HERPUD1-218ENST00000569569 ZNF417Q8TAU3 575 aa12.19□□□□□ -0.46
HERPUD1-218ENST00000569569 LZICQ8WZA0 190 aa12.19□□□□□ -0.46
HERPUD1-218ENST00000569569 CCT8L2Q96SF2 557 aa12.19□□□□□ -0.46
HERPUD1-218ENST00000569569 ZNF587Q96SQ5 575 aaPredicted RBP12.19□□□□□ -0.46
HERPUD1-218ENST00000569569 POLR2J2Q9GZM3 115 aaKnown RBP12.19□□□□□ -0.46
HERPUD1-218ENST00000569569 POLR2J3Q9H1A7 115 aaKnown RBP12.19□□□□□ -0.46
HERPUD1-218ENST00000569569 NGBQ9NPG2 151 aa12.19□□□□□ -0.46
HERPUD1-218ENST00000569569 TAS2R16Q9NYV7 291 aa12.19□□□□□ -0.46
HERPUD1-218ENST00000569569 GMPR2Q9P2T1 348 aaKnown RBP12.19□□□□□ -0.46
HERPUD1-218ENST00000569569 ABCD2Q9UBJ2 740 aa12.19□□□□□ -0.46
HERPUD1-218ENST00000569569 SLC7A7Q9UM01 511 aa12.19□□□□□ -0.46
HERPUD1-218ENST00000569569 ARID1AO14497 2285 aa12.18□□□□□ -0.46
HERPUD1-218ENST00000569569 LOC102725191A0A1B0GVB3 256 aa12.18□□□□□ -0.46
HERPUD1-218ENST00000569569 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.18□□□□□ -0.46
HERPUD1-218ENST00000569569 CIB4A0PJX0 185 aa12.18□□□□□ -0.46
HERPUD1-218ENST00000569569 CXCR6O00574 342 aa12.18□□□□□ -0.46
HERPUD1-218ENST00000569569 LYPD3O95274 346 aa12.18□□□□□ -0.46
HERPUD1-218ENST00000569569 MT-ATP6P00846 226 aa12.18□□□□□ -0.46
HERPUD1-218ENST00000569569 BGLAPP02818 100 aa12.18□□□□□ -0.46
HERPUD1-218ENST00000569569 GGT1P19440 569 aa12.18□□□□□ -0.46
HERPUD1-218ENST00000569569 TNFRSF1BP20333 461 aa12.18□□□□□ -0.46
HERPUD1-218ENST00000569569 CBLP22681 906 aa12.18□□□□□ -0.46
HERPUD1-218ENST00000569569 LOXP28300 417 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms