RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 KHNYNO15037 678 aaKnown RBP8.03□□□□□ -1.12
LINC00558-201ENST00000569422 LYRM1O43325 122 aa8.03□□□□□ -1.12
LINC00558-201ENST00000569422 SMPD2O60906 423 aa8.03□□□□□ -1.12
LINC00558-201ENST00000569422 PTP4A3O75365 173 aa8.03□□□□□ -1.12
LINC00558-201ENST00000569422 F13BP05160 661 aa8.03□□□□□ -1.12
LINC00558-201ENST00000569422 PRKAR1AP10644 381 aa8.03□□□□□ -1.12
LINC00558-201ENST00000569422 SLC6A6P31641 620 aa8.03□□□□□ -1.12
LINC00558-201ENST00000569422 RPS27P42677 84 aaKnown RBP8.03□□□□□ -1.12
LINC00558-201ENST00000569422 ASAH1Q13510 395 aa8.03□□□□□ -1.12
LINC00558-201ENST00000569422 ZNF613Q6PF04 617 aa8.03□□□□□ -1.12
LINC00558-201ENST00000569422 CBLN3Q6UW01 205 aa8.03□□□□□ -1.12
LINC00558-201ENST00000569422 SEZ6L2Q6UXD5 910 aa8.03□□□□□ -1.12
LINC00558-201ENST00000569422 PPP1R3EQ9H7J1 279 aa8.03□□□□□ -1.12
LINC00558-201ENST00000569422 ERVMER34-1Q9H9K5 563 aa8.03□□□□□ -1.12
LINC00558-201ENST00000569422 MKKSQ9NPJ1 570 aaPredicted RBP8.03□□□□□ -1.12
LINC00558-201ENST00000569422 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.03□□□□□ -1.12
LINC00558-201ENST00000569422 DHCR7Q9UBM7 475 aaKnown RBP8.03□□□□□ -1.12
LINC00558-201ENST00000569422 FANCMQ8IYD8 2048 aa8.03□□□□□ -1.12
LINC00558-201ENST00000569422 IGHV5-51A0A0C4DH38 117 aa8.03□□□□□ -1.12
LINC00558-201ENST00000569422 IFNGP01579 166 aa8.03□□□□□ -1.12
LINC00558-201ENST00000569422 TFP02787 698 aa8.03□□□□□ -1.12
LINC00558-201ENST00000569422 PROS1P07225 676 aa8.03□□□□□ -1.12
LINC00558-201ENST00000569422 SNRPBP14678 240 aaKnown RBP8.03□□□□□ -1.12
LINC00558-201ENST00000569422 SHISA6Q6ZSJ9 500 aa8.03□□□□□ -1.12
LINC00558-201ENST00000569422 ZNF433Q8N7K0 673 aaPredicted RBP8.03□□□□□ -1.12
LINC00558-201ENST00000569422 BCORP1Q8N888 145 aa8.03□□□□□ -1.12
LINC00558-201ENST00000569422 TSTD1Q8NFU3 115 aa8.03□□□□□ -1.12
LINC00558-201ENST00000569422 OR51Q1Q8NH59 317 aa8.03□□□□□ -1.12
LINC00558-201ENST00000569422 TRMT10AQ8TBZ6 339 aaKnown RBP8.03□□□□□ -1.12
LINC00558-201ENST00000569422 SGTBQ96EQ0 304 aa8.03□□□□□ -1.12
LINC00558-201ENST00000569422 VSTM2LQ96N03 204 aa8.03□□□□□ -1.12
LINC00558-201ENST00000569422 FOXN4Q96NZ1 517 aa8.03□□□□□ -1.12
LINC00558-201ENST00000569422 KLHDC3Q9BQ90 382 aa8.03□□□□□ -1.12
LINC00558-201ENST00000569422 TRIM2Q9C040 744 aa8.03□□□□□ -1.12
LINC00558-201ENST00000569422 SYNDIG1Q9H7V2 258 aa8.03□□□□□ -1.12
LINC00558-201ENST00000569422 SRA1Q9HD15 236 aaKnown RBP8.03□□□□□ -1.12
LINC00558-201ENST00000569422 MRPL15Q9P015 296 aaKnown RBP8.03□□□□□ -1.12
LINC00558-201ENST00000569422 CACNA1CQ13936 2221 aa8.03□□□□□ -1.12
LINC00558-201ENST00000569422 A0A087WV48 116 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 ACOD1A6NK06 481 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 C17orf105B2RV13 164 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 J3QRE1 110 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 PIAS2O75928 621 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 NDUFB2O95178 105 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 NUDT14O95848 222 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 AK1P00568 194 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 CT45A8P0DMV1 189 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 CT45A9P0DMV2 189 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 EDNRAP25101 427 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 AQP2P41181 271 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 HTR2BP41595 481 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 CT45A2Q5DJT8 189 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 SFXN4Q6P4A7 337 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 ZCCHC12Q6PEW1 402 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 ULK3Q6PHR2 472 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 MED25Q71SY5 747 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 GPR135Q8IZ08 494 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 ZNF511Q8NB15 262 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 SMRP1Q8NCR6 262 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 OR4D9Q8NGE8 314 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 OR5H6Q8NGV6 325 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 MOSPD2Q8NHP6 518 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 THAP4Q8WY91 577 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 HSPA12BQ96MM6 686 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 ELF4Q99607 663 aaPredicted RBP8.02□□□□□ -1.13
LINC00558-201ENST00000569422 CTRCQ99895 268 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 BEX1Q9HBH7 125 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 RPRD1BQ9NQG5 326 aaKnown RBP8.02□□□□□ -1.13
LINC00558-201ENST00000569422 ACOXLQ9NUZ1 547 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 C14orf105Q9NVL8 296 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 POLHQ9Y253 713 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 VPS13AQ96RL7 3174 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 TRBV2A0A0J9YWF9 115 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 A0A1W2PPC4 97 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 OIP5O43482 229 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 CTNSO60931 367 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 CD3GP09693 182 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 F8A1P23610 371 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 MAP3K8P41279 467 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 BLKP51451 505 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 PON3Q15166 354 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 CD226Q15762 336 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 TCTE1Q5JU00 501 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 ZNF563Q8TA94 476 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 ADAMTS18Q8TE60 1221 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 GCDHQ92947 438 aaPredicted RBP8.02□□□□□ -1.13
LINC00558-201ENST00000569422 TSLPQ969D9 159 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 UPRTQ96BW1 309 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 Q96M85 177 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 OR14A2Q96R54 314 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 ADOQ96SZ5 270 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 ORAI3Q9BRQ5 295 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 SLC25A18Q9H1K4 315 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 BRD7Q9NPI1 651 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 POLE3Q9NRF9 147 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 ADAM30Q9UKF2 790 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 ALG5Q9Y673 324 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 TEX13CA0A0J9YWL9 993 aa8.02□□□□□ -1.13
LINC00558-201ENST00000569422 ELOA3DA6NLF2 546 aaPredicted RBP8.02□□□□□ -1.13
LINC00558-201ENST00000569422 ALG1L2C9J202 215 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms