RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 SLC6A1P30531 599 aa6.63□□□□□ -1.35
CNOT1-216ENST00000569240 GJA5P36382 358 aa6.63□□□□□ -1.35
CNOT1-216ENST00000569240 HTR6P50406 440 aa6.63□□□□□ -1.35
CNOT1-216ENST00000569240 MAP2K6P52564 334 aa6.63□□□□□ -1.35
CNOT1-216ENST00000569240 NHLH2Q02577 135 aa6.63□□□□□ -1.35
CNOT1-216ENST00000569240 SLC16A12Q6ZSM3 486 aa6.63□□□□□ -1.35
CNOT1-216ENST00000569240 LRP10Q7Z4F1 713 aa6.63□□□□□ -1.35
CNOT1-216ENST00000569240 LYG2Q86SG7 212 aa6.63□□□□□ -1.35
CNOT1-216ENST00000569240 TMEM229BQ8NBD8 167 aa6.63□□□□□ -1.35
CNOT1-216ENST00000569240 CLEC4DQ8WXI8 215 aa6.63□□□□□ -1.35
CNOT1-216ENST00000569240 CDS1Q92903 461 aa6.63□□□□□ -1.35
CNOT1-216ENST00000569240 SMIM12Q96EX1 92 aa6.63□□□□□ -1.35
CNOT1-216ENST00000569240 DPH2Q9BQC3 489 aaPredicted RBP6.63□□□□□ -1.35
CNOT1-216ENST00000569240 ARHGAP9Q9BRR9 750 aa6.63□□□□□ -1.35
CNOT1-216ENST00000569240 ZNF226Q9NYT6 803 aa6.63□□□□□ -1.35
CNOT1-216ENST00000569240 A6NL46 340 aa6.63□□□□□ -1.35
CNOT1-216ENST00000569240 PIRO00625 290 aa6.63□□□□□ -1.35
CNOT1-216ENST00000569240 PTP4A3O75365 173 aa6.63□□□□□ -1.35
CNOT1-216ENST00000569240 CLEC3AO75596 197 aa6.63□□□□□ -1.35
CNOT1-216ENST00000569240 GABRA1P14867 456 aa6.63□□□□□ -1.35
CNOT1-216ENST00000569240 ZNF43P17038 809 aa6.63□□□□□ -1.35
CNOT1-216ENST00000569240 DUSP1P28562 367 aa6.63□□□□□ -1.35
CNOT1-216ENST00000569240 TRHRP34981 398 aaPredicted RBP6.63□□□□□ -1.35
CNOT1-216ENST00000569240 PIGAP37287 484 aa6.63□□□□□ -1.35
CNOT1-216ENST00000569240 RAB11AP62491 216 aa6.63□□□□□ -1.35
CNOT1-216ENST00000569240 TRIM61Q5EBN2 209 aa6.63□□□□□ -1.35
CNOT1-216ENST00000569240 RPUSD3Q6P087 351 aaKnown RBP6.63□□□□□ -1.35
CNOT1-216ENST00000569240 UBE3DQ7Z6J8 389 aa6.63□□□□□ -1.35
CNOT1-216ENST00000569240 OR4F15Q8NGB8 312 aa6.63□□□□□ -1.35
CNOT1-216ENST00000569240 M1APQ8TC57 530 aa6.63□□□□□ -1.35
CNOT1-216ENST00000569240 SEH1LQ96EE3 360 aa6.63□□□□□ -1.35
CNOT1-216ENST00000569240 PGAM5Q96HS1 289 aa6.63□□□□□ -1.35
CNOT1-216ENST00000569240 ACTR3CQ9C0K3 210 aaPredicted RBP6.63□□□□□ -1.35
CNOT1-216ENST00000569240 GHRLQ9UBU3 117 aa6.63□□□□□ -1.35
CNOT1-216ENST00000569240 B3GALT5Q9Y2C3 310 aa6.63□□□□□ -1.35
CNOT1-216ENST00000569240 A0A1B0GVT2 93 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 OR6C68A6NDL8 312 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 MFNGO00587 321 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 DVL2O14641 736 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 AKR7A2O43488 359 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 ABLIM3O94929 683 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 NQO2P16083 231 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 FAM74A3Q4VXF1 159 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 TMEM201Q5SNT2 666 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 MTMR14Q8NCE2 650 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 OR51F2Q8NH61 342 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 HUS1BQ8NHY5 278 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 PSMF1Q92530 271 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 C3orf30Q96M34 536 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 CASD1Q96PB1 797 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 SH3BGRL2Q9UJC5 107 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 FLVCR2Q9UPI3 526 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 TMEM210A6NLX4 147 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 BLOC1S5-TXNDC5H3BN57 136 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 SULT1A3P0DMM9 295 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 SULT1A4P0DMN0 295 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 RAC2P15153 192 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 FOLR1P15328 257 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 PRDX3P30048 256 aaKnown RBP6.62□□□□□ -1.35
CNOT1-216ENST00000569240 OR10J1P30954 320 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 SLC6A9P48067 706 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 FABP6P51161 128 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 EML3Q32P44 896 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 ZNF648Q5T619 568 aaPredicted RBP6.62□□□□□ -1.35
CNOT1-216ENST00000569240 GGNBP1Q5YKI7 109 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 TMEM64Q6YI46 380 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 GCNT2Q8N0V5 402 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 NHLRC2Q8NBF2 726 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 PPP1R35Q8TAP8 253 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 GHSRQ92847 366 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 IKZF4Q9H2S9 585 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 TMEM131LA2VDJ0 1609 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 A8MUA0 341 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 MCRIP1C9JLW8 97 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 APOA2P02652 100 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 TK1P04183 234 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 GDF5P43026 501 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 EMP2P54851 167 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 BEX3Q00994 111 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 CATR1Q13166 79 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 AFMIDQ63HM1 303 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 KCTD11Q693B1 232 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 WDR73Q6P4I2 378 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 SLC16A14Q7RTX9 510 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 OR10D4PQ8NGN7 298 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 OR51A7Q8NH64 312 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 NEURL3Q96EH8 262 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 TOE1Q96GM8 510 aaKnown RBP6.62□□□□□ -1.35
CNOT1-216ENST00000569240 HCAR1Q9BXC0 346 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 C20orf27Q9GZN8 174 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 ZNF331Q9NQX6 463 aaPredicted RBP6.62□□□□□ -1.35
CNOT1-216ENST00000569240 ASB1Q9Y576 335 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 KIF1AQ12756 1690 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 A8MVM7 634 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 ITGB2P05107 769 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 PCBP4P57723 403 aaKnown RBP6.62□□□□□ -1.35
CNOT1-216ENST00000569240 EBPQ15125 230 aaKnown RBP6.62□□□□□ -1.35
CNOT1-216ENST00000569240 DLEU7Q6UYE1 221 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 SLC24A5Q71RS6 500 aa6.62□□□□□ -1.35
CNOT1-216ENST00000569240 ZNF681Q96N22 645 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms