RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 KDM8Q8N371 416 aa11.37□□□□□ -0.59
CDT1-203ENST00000569140 MPP4Q96JB8 637 aa11.37□□□□□ -0.59
CDT1-203ENST00000569140 PRRC1Q96M27 445 aa11.37□□□□□ -0.59
CDT1-203ENST00000569140 NSMCE2Q96MF7 247 aa11.37□□□□□ -0.59
CDT1-203ENST00000569140 TMEM43Q9BTV4 400 aa11.37□□□□□ -0.59
CDT1-203ENST00000569140 AMBRA1Q9C0C7 1298 aa11.37□□□□□ -0.59
CDT1-203ENST00000569140 POLR2J2Q9GZM3 115 aaKnown RBP11.37□□□□□ -0.59
CDT1-203ENST00000569140 POLR2J3Q9H1A7 115 aaKnown RBP11.37□□□□□ -0.59
CDT1-203ENST00000569140 NDRG3Q9UGV2 375 aa11.37□□□□□ -0.59
CDT1-203ENST00000569140 RASD1Q9Y272 281 aa11.37□□□□□ -0.59
CDT1-203ENST00000569140 SNX13Q9Y5W8 968 aa11.37□□□□□ -0.59
CDT1-203ENST00000569140 FLVCR1Q9Y5Y0 555 aa11.37□□□□□ -0.59
CDT1-203ENST00000569140 INTS1Q8N201 2190 aaKnown RBP11.37□□□□□ -0.59
CDT1-203ENST00000569140 IGKV3D-15A0A087WSY6 115 aa11.36□□□□□ -0.59
CDT1-203ENST00000569140 FTCDNL1E5RQL4 147 aa11.36□□□□□ -0.59
CDT1-203ENST00000569140 LRRN3E7EW58 273 aa11.36□□□□□ -0.59
CDT1-203ENST00000569140 hCG_2039718K7EN88 272 aa11.36□□□□□ -0.59
CDT1-203ENST00000569140 CASKO14936 926 aa11.36□□□□□ -0.59
CDT1-203ENST00000569140 KRT33AO76009 404 aa11.36□□□□□ -0.59
CDT1-203ENST00000569140 OR6A2O95222 327 aa11.36□□□□□ -0.59
CDT1-203ENST00000569140 STAMBPO95630 424 aa11.36□□□□□ -0.59
CDT1-203ENST00000569140 BGLAPP02818 100 aa11.36□□□□□ -0.59
CDT1-203ENST00000569140 HIST1H2ABP04908 130 aa11.36□□□□□ -0.59
CDT1-203ENST00000569140 T-ENOLP0DO92 83 aa11.36□□□□□ -0.59
CDT1-203ENST00000569140 AHCYP23526 432 aa11.36□□□□□ -0.59
CDT1-203ENST00000569140 IL32P24001 234 aa11.36□□□□□ -0.59
CDT1-203ENST00000569140 SSTR2P30874 369 aa11.36□□□□□ -0.59
CDT1-203ENST00000569140 OR3A2P47893 321 aa11.36□□□□□ -0.59
CDT1-203ENST00000569140 H3F3AP84243 136 aa11.36□□□□□ -0.59
CDT1-203ENST00000569140 ST3GAL3Q11203 375 aa11.36□□□□□ -0.59
CDT1-203ENST00000569140 SLC17A1Q14916 467 aa11.36□□□□□ -0.59
CDT1-203ENST00000569140 TSC22D1Q15714 1073 aa11.36□□□□□ -0.59
CDT1-203ENST00000569140 CYP2R1Q6VVX0 501 aa11.36□□□□□ -0.59
CDT1-203ENST00000569140 H1FNTQ75WM6 255 aaPredicted RBP11.36□□□□□ -0.59
CDT1-203ENST00000569140 HIST3H2AQ7L7L0 130 aa11.36□□□□□ -0.59
CDT1-203ENST00000569140 NKAIN4Q8IVV8 208 aa11.36□□□□□ -0.59
CDT1-203ENST00000569140 PFN4Q8NHR9 129 aa11.36□□□□□ -0.59
CDT1-203ENST00000569140 FAM222BQ8WU58 562 aa11.36□□□□□ -0.59
CDT1-203ENST00000569140 TMEM255BQ8WV15 326 aa11.36□□□□□ -0.59
CDT1-203ENST00000569140 TMEM239Q8WW34 195 aa11.36□□□□□ -0.59
CDT1-203ENST00000569140 HIST1H2ACQ93077 130 aa11.36□□□□□ -0.59
CDT1-203ENST00000569140 CCDC124Q96CT7 223 aaKnown RBP11.36□□□□□ -0.59
CDT1-203ENST00000569140 MOGAT1Q96PD6 335 aa11.36□□□□□ -0.59
CDT1-203ENST00000569140 SF3B5Q9BWJ5 86 aaKnown RBP11.36□□□□□ -0.59
CDT1-203ENST00000569140 MCCC2Q9HCC0 563 aa11.36□□□□□ -0.59
CDT1-203ENST00000569140 DCAF13Q9NV06 445 aaKnown RBP11.36□□□□□ -0.59
CDT1-203ENST00000569140 UPB1Q9UBR1 384 aa11.36□□□□□ -0.59
CDT1-203ENST00000569140 KCNN3Q9UGI6 736 aa11.36□□□□□ -0.59
CDT1-203ENST00000569140 CD300AQ9UGN4 299 aa11.36□□□□□ -0.59
CDT1-203ENST00000569140 FAM32AQ9Y421 112 aaKnown RBP11.36□□□□□ -0.59
CDT1-203ENST00000569140 ENO4A6NNW6 628 aa11.35□□□□□ -0.59
CDT1-203ENST00000569140 C11orf98E9PRG8 122 aa11.35□□□□□ -0.59
CDT1-203ENST00000569140 GYG2O15488 501 aa11.35□□□□□ -0.59
CDT1-203ENST00000569140 PIP5K1CO60331 668 aa11.35□□□□□ -0.59
CDT1-203ENST00000569140 LYZL6O75951 148 aa11.35□□□□□ -0.59
CDT1-203ENST00000569140 VAMP5O95183 116 aa11.35□□□□□ -0.59
CDT1-203ENST00000569140 LYPD3O95274 346 aa11.35□□□□□ -0.59
CDT1-203ENST00000569140 PRF1P14222 555 aa11.35□□□□□ -0.59
CDT1-203ENST00000569140 ZNF43P17038 809 aa11.35□□□□□ -0.59
CDT1-203ENST00000569140 EDNRAP25101 427 aa11.35□□□□□ -0.59
CDT1-203ENST00000569140 CCKARP32238 428 aa11.35□□□□□ -0.59
CDT1-203ENST00000569140 SLC16A1P53985 500 aa11.35□□□□□ -0.59
CDT1-203ENST00000569140 UGT2B15P54855 530 aa11.35□□□□□ -0.59
CDT1-203ENST00000569140 CLDN17P56750 224 aa11.35□□□□□ -0.59
CDT1-203ENST00000569140 TRAM2Q15035 370 aa11.35□□□□□ -0.59
CDT1-203ENST00000569140 SPATS1Q496A3 300 aa11.35□□□□□ -0.59
CDT1-203ENST00000569140 C9orf135Q5VTT2 229 aa11.35□□□□□ -0.59
CDT1-203ENST00000569140 NIPAL3Q6P499 406 aa11.35□□□□□ -0.59
CDT1-203ENST00000569140 UEVLDQ8IX04 471 aa11.35□□□□□ -0.59
CDT1-203ENST00000569140 FAM86B1Q8N7N1 296 aa11.35□□□□□ -0.59
CDT1-203ENST00000569140 KISS1RQ969F8 398 aaPredicted RBP11.35□□□□□ -0.59
CDT1-203ENST00000569140 MCUR1Q96AQ8 359 aa11.35□□□□□ -0.59
CDT1-203ENST00000569140 ZNF385AQ96PM9 386 aaKnown RBP11.35□□□□□ -0.59
CDT1-203ENST00000569140 PRSS27Q9BQR3 290 aa11.35□□□□□ -0.59
CDT1-203ENST00000569140 THTPAQ9BU02 230 aa11.35□□□□□ -0.59
CDT1-203ENST00000569140 ACTR6Q9GZN1 396 aa11.35□□□□□ -0.59
CDT1-203ENST00000569140 GORASP2Q9H8Y8 452 aa11.35□□□□□ -0.59
CDT1-203ENST00000569140 NANSQ9NR45 359 aa11.35□□□□□ -0.59
CDT1-203ENST00000569140 PARPBPQ9NWS1 579 aa11.35□□□□□ -0.59
CDT1-203ENST00000569140 PRPF19Q9UMS4 504 aaKnown RBP11.35□□□□□ -0.59
CDT1-203ENST00000569140 A4GNTQ9UNA3 340 aa11.35□□□□□ -0.59
CDT1-203ENST00000569140 MED31Q9Y3C7 131 aa11.35□□□□□ -0.59
CDT1-203ENST00000569140 CORINQ9Y5Q5 1042 aa11.35□□□□□ -0.59
CDT1-203ENST00000569140 USP9YO00507 2555 aaPredicted RBP11.35□□□□□ -0.59
CDT1-203ENST00000569140 MPDZO75970 2070 aa11.34□□□□□ -0.59
CDT1-203ENST00000569140 CIB4A0PJX0 185 aa11.34□□□□□ -0.59
CDT1-203ENST00000569140 AKAP8O43823 692 aaKnown RBP11.34□□□□□ -0.59
CDT1-203ENST00000569140 MT-ATP6P00846 226 aa11.34□□□□□ -0.59
CDT1-203ENST00000569140 ADORA3P0DMS8 318 aa11.34□□□□□ -0.59
CDT1-203ENST00000569140 DNAJA1P31689 397 aaKnown RBP11.34□□□□□ -0.59
CDT1-203ENST00000569140 RBM34P42696 430 aaKnown RBP11.34□□□□□ -0.59
CDT1-203ENST00000569140 P2RY4P51582 365 aa11.34□□□□□ -0.59
CDT1-203ENST00000569140 POU3F1Q03052 451 aaPredicted RBP11.34□□□□□ -0.59
CDT1-203ENST00000569140 LTBQ06643 244 aa11.34□□□□□ -0.59
CDT1-203ENST00000569140 FAPQ12884 760 aa11.34□□□□□ -0.59
CDT1-203ENST00000569140 POU4F3Q15319 338 aa11.34□□□□□ -0.59
CDT1-203ENST00000569140 STK11Q15831 433 aa11.34□□□□□ -0.59
CDT1-203ENST00000569140 ZNF74Q16587 644 aa11.34□□□□□ -0.59
CDT1-203ENST00000569140 DNAL1Q4LDG9 190 aa11.34□□□□□ -0.59
CDT1-203ENST00000569140 FGD3Q5JSP0 725 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms