RNA–Protein interactions for RNA: ENST00000568605.5

CLK3-224, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-224ENST00000568605 SERPINA1P01009 418 aa11.52□□□□□ -0.57
CLK3-224ENST00000568605 THRBP10828 461 aa11.52□□□□□ -0.57
CLK3-224ENST00000568605 HSD17B1P14061 328 aa11.52□□□□□ -0.57
CLK3-224ENST00000568605 PRF1P14222 555 aa11.52□□□□□ -0.57
CLK3-224ENST00000568605 GGT1P19440 569 aa11.52□□□□□ -0.57
CLK3-224ENST00000568605 CALB2P22676 271 aa11.52□□□□□ -0.57
CLK3-224ENST00000568605 IL1RL1Q01638 556 aa11.52□□□□□ -0.57
CLK3-224ENST00000568605 SLC17A1Q14916 467 aa11.52□□□□□ -0.57
CLK3-224ENST00000568605 POU4F3Q15319 338 aa11.52□□□□□ -0.57
CLK3-224ENST00000568605 IFI44LQ53G44 452 aa11.52□□□□□ -0.57
CLK3-224ENST00000568605 CBLL1Q75N03 491 aa11.52□□□□□ -0.57
CLK3-224ENST00000568605 SSX8Q7RTT4 187 aa11.52□□□□□ -0.57
CLK3-224ENST00000568605 GABRG1Q8N1C3 465 aa11.52□□□□□ -0.57
CLK3-224ENST00000568605 UBE2J2Q8N2K1 259 aa11.52□□□□□ -0.57
CLK3-224ENST00000568605 C10orf53Q8N6V4 93 aa11.52□□□□□ -0.57
CLK3-224ENST00000568605 ADPRHL1Q8NDY3 354 aa11.52□□□□□ -0.57
CLK3-224ENST00000568605 OR9K2Q8NGE7 335 aa11.52□□□□□ -0.57
CLK3-224ENST00000568605 OR4D11Q8NGI4 311 aa11.52□□□□□ -0.57
CLK3-224ENST00000568605 LINC01560Q8TB33 94 aa11.52□□□□□ -0.57
CLK3-224ENST00000568605 KISS1RQ969F8 398 aaPredicted RBP11.52□□□□□ -0.57
CLK3-224ENST00000568605 TMEM45BQ96B21 275 aa11.52□□□□□ -0.57
CLK3-224ENST00000568605 KTI12Q96EK9 354 aaPredicted RBP11.52□□□□□ -0.57
CLK3-224ENST00000568605 SLC41A3Q96GZ6 507 aa11.52□□□□□ -0.57
CLK3-224ENST00000568605 PRRC1Q96M27 445 aa11.52□□□□□ -0.57
CLK3-224ENST00000568605 WFDC6Q9BQY6 131 aa11.52□□□□□ -0.57
CLK3-224ENST00000568605 PTDSS2Q9BVG9 487 aa11.52□□□□□ -0.57
CLK3-224ENST00000568605 IGKV1D-42A0A075B6H8 117 aa11.51□□□□□ -0.57
CLK3-224ENST00000568605 OR6C65A6NJZ3 312 aa11.51□□□□□ -0.57
CLK3-224ENST00000568605 ZNF814B7Z6K7 855 aa11.51□□□□□ -0.57
CLK3-224ENST00000568605 M0R082 166 aa11.51□□□□□ -0.57
CLK3-224ENST00000568605 RAMP1O60894 148 aa11.51□□□□□ -0.57
CLK3-224ENST00000568605 ZNF43P17038 809 aa11.51□□□□□ -0.57
CLK3-224ENST00000568605 GRPRP30550 384 aa11.51□□□□□ -0.57
CLK3-224ENST00000568605 RBM34P42696 430 aaKnown RBP11.51□□□□□ -0.57
CLK3-224ENST00000568605 OR1E2P47887 323 aa11.51□□□□□ -0.57
CLK3-224ENST00000568605 ST3GAL3Q11203 375 aa11.51□□□□□ -0.57
CLK3-224ENST00000568605 ITGADQ13349 1161 aa11.51□□□□□ -0.57
CLK3-224ENST00000568605 DAZAP2Q15038 168 aaPredicted RBP11.51□□□□□ -0.57
CLK3-224ENST00000568605 SFRP5Q5T4F7 317 aa11.51□□□□□ -0.57
CLK3-224ENST00000568605 FBXW9Q5XUX1 488 aa11.51□□□□□ -0.57
CLK3-224ENST00000568605 STAC2Q6ZMT1 411 aa11.51□□□□□ -0.57
CLK3-224ENST00000568605 FKBP9P1Q75LS8 142 aa11.51□□□□□ -0.57
CLK3-224ENST00000568605 ABHD12BQ7Z5M8 362 aaPredicted RBP11.51□□□□□ -0.57
CLK3-224ENST00000568605 CYP4Z1Q86W10 505 aa11.51□□□□□ -0.57
CLK3-224ENST00000568605 CXorf67Q86X51 503 aaPredicted RBP11.51□□□□□ -0.57
CLK3-224ENST00000568605 RBM45Q8IUH3 476 aaKnown RBP11.51□□□□□ -0.57
CLK3-224ENST00000568605 DEFB107AQ8IZN7 70 aa11.51□□□□□ -0.57
CLK3-224ENST00000568605 ARHGAP24Q8N264 748 aa11.51□□□□□ -0.57
CLK3-224ENST00000568605 ZNF417Q8TAU3 575 aa11.51□□□□□ -0.57
CLK3-224ENST00000568605 TAAR8Q969N4 342 aa11.51□□□□□ -0.57
CLK3-224ENST00000568605 ZNF775Q96BV0 537 aaPredicted RBP11.51□□□□□ -0.57
CLK3-224ENST00000568605 NSL1Q96IY1 281 aa11.51□□□□□ -0.57
CLK3-224ENST00000568605 ZNF587Q96SQ5 575 aaPredicted RBP11.51□□□□□ -0.57
CLK3-224ENST00000568605 ACTR6Q9GZN1 396 aa11.51□□□□□ -0.57
CLK3-224ENST00000568605 CLEC4MQ9H2X3 399 aaPredicted RBP11.51□□□□□ -0.57
CLK3-224ENST00000568605 ASB6Q9NWX5 421 aa11.51□□□□□ -0.57
CLK3-224ENST00000568605 UPB1Q9UBR1 384 aa11.51□□□□□ -0.57
CLK3-224ENST00000568605 MALT1Q9UDY8 824 aa11.51□□□□□ -0.57
CLK3-224ENST00000568605 PRSS50Q9UI38 385 aa11.51□□□□□ -0.57
CLK3-224ENST00000568605 EDARQ9UNE0 448 aa11.51□□□□□ -0.57
CLK3-224ENST00000568605 DSCAMO60469 2012 aa11.5□□□□□ -0.57
CLK3-224ENST00000568605 OR6A2O95222 327 aa11.5□□□□□ -0.57
CLK3-224ENST00000568605 ADAP00813 363 aa11.5□□□□□ -0.57
CLK3-224ENST00000568605 NCK1P16333 377 aa11.5□□□□□ -0.57
CLK3-224ENST00000568605 TNFRSF1BP20333 461 aa11.5□□□□□ -0.57
CLK3-224ENST00000568605 COX5AP20674 150 aa11.5□□□□□ -0.57
CLK3-224ENST00000568605 CRYGSP22914 178 aa11.5□□□□□ -0.57
CLK3-224ENST00000568605 SLC25A3Q00325 362 aa11.5□□□□□ -0.57
CLK3-224ENST00000568605 C1DQ13901 141 aaKnown RBP11.5□□□□□ -0.57
CLK3-224ENST00000568605 GLYATQ6IB77 296 aa11.5□□□□□ -0.57
CLK3-224ENST00000568605 LINC00114Q6XXX2 140 aa11.5□□□□□ -0.57
CLK3-224ENST00000568605 H1FNTQ75WM6 255 aaPredicted RBP11.5□□□□□ -0.57
CLK3-224ENST00000568605 BHLHA15Q7RTS1 189 aaPredicted RBP11.5□□□□□ -0.57
CLK3-224ENST00000568605 AAED1Q7RTV5 226 aa11.5□□□□□ -0.57
CLK3-224ENST00000568605 VTCN1Q7Z7D3 282 aa11.5□□□□□ -0.57
CLK3-224ENST00000568605 UEVLDQ8IX04 471 aa11.5□□□□□ -0.57
CLK3-224ENST00000568605 OFCC1Q8IZS5 231 aa11.5□□□□□ -0.57
CLK3-224ENST00000568605 RNF148Q8N7C7 305 aa11.5□□□□□ -0.57
CLK3-224ENST00000568605 POMGNT2Q8NAT1 580 aa11.5□□□□□ -0.57
CLK3-224ENST00000568605 HSH2DQ96JZ2 352 aa11.5□□□□□ -0.57
CLK3-224ENST00000568605 LURAP1Q96LR2 239 aa11.5□□□□□ -0.57
CLK3-224ENST00000568605 HS6ST2Q96MM7 605 aa11.5□□□□□ -0.57
CLK3-224ENST00000568605 OXGR1Q96P68 337 aa11.5□□□□□ -0.57
CLK3-224ENST00000568605 ZNF426Q9BUY5 554 aa11.5□□□□□ -0.57
CLK3-224ENST00000568605 POLDIP3Q9BY77 421 aaKnown RBP11.5□□□□□ -0.57
CLK3-224ENST00000568605 SLCO5A1Q9H2Y9 848 aa11.5□□□□□ -0.57
CLK3-224ENST00000568605 FKRPQ9H9S5 495 aa11.5□□□□□ -0.57
CLK3-224ENST00000568605 NGBQ9NPG2 151 aa11.5□□□□□ -0.57
CLK3-224ENST00000568605 NANSQ9NR45 359 aa11.5□□□□□ -0.57
CLK3-224ENST00000568605 MRPL39Q9NYK5 338 aaKnown RBP11.5□□□□□ -0.57
CLK3-224ENST00000568605 EGFL7Q9UHF1 273 aa11.5□□□□□ -0.57
CLK3-224ENST00000568605 RIMS3Q9UJD0 308 aa11.5□□□□□ -0.57
CLK3-224ENST00000568605 RCE1Q9Y256 329 aa11.5□□□□□ -0.57
CLK3-224ENST00000568605 SNX13Q9Y5W8 968 aa11.5□□□□□ -0.57
CLK3-224ENST00000568605 HRNRQ86YZ3 2850 aaPredicted RBP11.5□□□□□ -0.57
CLK3-224ENST00000568605 HTR3EA5X5Y0 456 aa11.49□□□□□ -0.57
CLK3-224ENST00000568605 B2RBV5 119 aa11.49□□□□□ -0.57
CLK3-224ENST00000568605 KPNA4O00629 521 aaPredicted RBP11.49□□□□□ -0.57
CLK3-224ENST00000568605 CTAG2O75638 210 aa11.49□□□□□ -0.57
CLK3-224ENST00000568605 KRT33AO76009 404 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms