RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 NUP214P35658 2090 aaPredicted RBP10.19□□□□□ -0.78
GTF3C1-209ENST00000568569 IGHV2OR16-5A0A0B4J2B6 119 aa10.18□□□□□ -0.78
GTF3C1-209ENST00000568569 M0R233 179 aa10.18□□□□□ -0.78
GTF3C1-209ENST00000568569 FAAHO00519 579 aa10.18□□□□□ -0.78
GTF3C1-209ENST00000568569 RNASET2O00584 256 aaKnown RBP10.18□□□□□ -0.78
GTF3C1-209ENST00000568569 COPEO14579 308 aa10.18□□□□□ -0.78
GTF3C1-209ENST00000568569 TRIM13O60858 407 aa10.18□□□□□ -0.78
GTF3C1-209ENST00000568569 VAMP5O95183 116 aa10.18□□□□□ -0.78
GTF3C1-209ENST00000568569 PNPP00491 289 aa10.18□□□□□ -0.78
GTF3C1-209ENST00000568569 CBR1P16152 277 aa10.18□□□□□ -0.78
GTF3C1-209ENST00000568569 ROR2Q01974 943 aaKnown RBP10.18□□□□□ -0.78
GTF3C1-209ENST00000568569 SNTB2Q13425 540 aaKnown RBP10.18□□□□□ -0.78
GTF3C1-209ENST00000568569 PGS1Q32NB8 556 aa10.18□□□□□ -0.78
GTF3C1-209ENST00000568569 SLC9B1Q4ZJI4 515 aa10.18□□□□□ -0.78
GTF3C1-209ENST00000568569 GPAT3Q53EU6 434 aa10.18□□□□□ -0.78
GTF3C1-209ENST00000568569 PDLIM3Q53GG5 364 aaPredicted RBP10.18□□□□□ -0.78
GTF3C1-209ENST00000568569 NIPAL3Q6P499 406 aa10.18□□□□□ -0.78
GTF3C1-209ENST00000568569 CREB3L2Q70SY1 520 aa10.18□□□□□ -0.78
GTF3C1-209ENST00000568569 LINGO2Q7L985 606 aa10.18□□□□□ -0.78
GTF3C1-209ENST00000568569 HMGN2P46Q86SG4 172 aa10.18□□□□□ -0.78
GTF3C1-209ENST00000568569 MYPOPQ86VE0 399 aaPredicted RBP10.18□□□□□ -0.78
GTF3C1-209ENST00000568569 LSRQ86X29 649 aaPredicted RBP10.18□□□□□ -0.78
GTF3C1-209ENST00000568569 AGR3Q8TD06 166 aa10.18□□□□□ -0.78
GTF3C1-209ENST00000568569 RAB8BQ92930 207 aa10.18□□□□□ -0.78
GTF3C1-209ENST00000568569 RACGAP1Q9H0H5 632 aa10.18□□□□□ -0.78
GTF3C1-209ENST00000568569 ADPRHL2Q9NX46 363 aa10.18□□□□□ -0.78
GTF3C1-209ENST00000568569 CMAHPQ9Y471 501 aa10.18□□□□□ -0.78
GTF3C1-209ENST00000568569 TRAV20A0A0B4J274 112 aa10.17□□□□□ -0.78
GTF3C1-209ENST00000568569 CFAP73A6NFT4 308 aa10.17□□□□□ -0.78
GTF3C1-209ENST00000568569 TMPRSS2O15393 492 aa10.17□□□□□ -0.78
GTF3C1-209ENST00000568569 SYNGR3O43761 229 aa10.17□□□□□ -0.78
GTF3C1-209ENST00000568569 SCN2BO60939 215 aa10.17□□□□□ -0.78
GTF3C1-209ENST00000568569 UPK3AO75631 287 aa10.17□□□□□ -0.78
GTF3C1-209ENST00000568569 GAAP10253 952 aa10.17□□□□□ -0.78
GTF3C1-209ENST00000568569 G6PDP11413 515 aa10.17□□□□□ -0.78
GTF3C1-209ENST00000568569 ACHEP22303 614 aa10.17□□□□□ -0.78
GTF3C1-209ENST00000568569 ARR3P36575 388 aa10.17□□□□□ -0.78
GTF3C1-209ENST00000568569 EVX1P49640 407 aa10.17□□□□□ -0.78
GTF3C1-209ENST00000568569 P2RY4P51582 365 aa10.17□□□□□ -0.78
GTF3C1-209ENST00000568569 CLDN8P56748 225 aa10.17□□□□□ -0.78
GTF3C1-209ENST00000568569 NPRL3Q12980 569 aa10.17□□□□□ -0.78
GTF3C1-209ENST00000568569 DAG1Q14118 895 aa10.17□□□□□ -0.78
GTF3C1-209ENST00000568569 GNA13Q14344 377 aa10.17□□□□□ -0.78
GTF3C1-209ENST00000568569 ELFN2Q5R3F8 820 aa10.17□□□□□ -0.78
GTF3C1-209ENST00000568569 PRAMEF8Q5VWM4 474 aa10.17□□□□□ -0.78
GTF3C1-209ENST00000568569 PRAMEF7Q5VXH5 474 aa10.17□□□□□ -0.78
GTF3C1-209ENST00000568569 OR4F3Q6IEY1 312 aa10.17□□□□□ -0.78
GTF3C1-209ENST00000568569 FAHD2BQ6P2I3 314 aaPredicted RBP10.17□□□□□ -0.78
GTF3C1-209ENST00000568569 C17orf53Q8N3J3 647 aaPredicted RBP10.17□□□□□ -0.78
GTF3C1-209ENST00000568569 ANKK1Q8NFD2 765 aa10.17□□□□□ -0.78
GTF3C1-209ENST00000568569 IL17RDQ8NFM7 739 aa10.17□□□□□ -0.78
GTF3C1-209ENST00000568569 OR4A15Q8NGL6 344 aa10.17□□□□□ -0.78
GTF3C1-209ENST00000568569 FAHD2AQ96GK7 314 aa10.17□□□□□ -0.78
GTF3C1-209ENST00000568569 C3orf30Q96M34 536 aa10.17□□□□□ -0.78
GTF3C1-209ENST00000568569 TAPBPLQ9BX59 468 aa10.17□□□□□ -0.78
GTF3C1-209ENST00000568569 SUCNR1Q9BXA5 334 aa10.17□□□□□ -0.78
GTF3C1-209ENST00000568569 LINC00470Q9BZP3 86 aa10.17□□□□□ -0.78
GTF3C1-209ENST00000568569 MS4A5Q9H3V2 200 aa10.17□□□□□ -0.78
GTF3C1-209ENST00000568569 ZNF696Q9H7X3 374 aa10.17□□□□□ -0.78
GTF3C1-209ENST00000568569 NOX3Q9HBY0 568 aa10.17□□□□□ -0.78
GTF3C1-209ENST00000568569 TREM2Q9NZC2 230 aa10.17□□□□□ -0.78
GTF3C1-209ENST00000568569 AGAP5A6NIR3 686 aa10.16□□□□□ -0.78
GTF3C1-209ENST00000568569 RPL36A-HNRNPH2H7BZ11 118 aa10.16□□□□□ -0.78
GTF3C1-209ENST00000568569 NPHS1O60500 1241 aa10.16□□□□□ -0.78
GTF3C1-209ENST00000568569 KRT4P19013 534 aa10.16□□□□□ -0.78
GTF3C1-209ENST00000568569 UQCRC2P22695 453 aa10.16□□□□□ -0.78
GTF3C1-209ENST00000568569 CXCR1P25024 350 aa10.16□□□□□ -0.78
GTF3C1-209ENST00000568569 TMEM33P57088 247 aa10.16□□□□□ -0.78
GTF3C1-209ENST00000568569 EPS8Q12929 822 aa10.16□□□□□ -0.78
GTF3C1-209ENST00000568569 MAD2L1Q13257 205 aaPredicted RBP10.16□□□□□ -0.78
GTF3C1-209ENST00000568569 GSTA3Q16772 222 aa10.16□□□□□ -0.78
GTF3C1-209ENST00000568569 SAXO2Q658L1 398 aa10.16□□□□□ -0.78
GTF3C1-209ENST00000568569 REP15Q6BDI9 236 aa10.16□□□□□ -0.78
GTF3C1-209ENST00000568569 KRT80Q6KB66 452 aa10.16□□□□□ -0.78
GTF3C1-209ENST00000568569 SHISA2Q6UWI4 295 aa10.16□□□□□ -0.78
GTF3C1-209ENST00000568569 CARM1Q86X55 608 aa10.16□□□□□ -0.78
GTF3C1-209ENST00000568569 MNS1Q8NEH6 495 aa10.16□□□□□ -0.78
GTF3C1-209ENST00000568569 OR8J2Q8NGG1 315 aa10.16□□□□□ -0.78
GTF3C1-209ENST00000568569 RDH5Q92781 318 aa10.16□□□□□ -0.78
GTF3C1-209ENST00000568569 MRPL24Q96A35 216 aaKnown RBP10.16□□□□□ -0.78
GTF3C1-209ENST00000568569 TUBGCP3Q96CW5 907 aa10.16□□□□□ -0.78
GTF3C1-209ENST00000568569 ZNF747Q9BV97 191 aa10.16□□□□□ -0.78
GTF3C1-209ENST00000568569 CRLF2Q9HC73 371 aa10.16□□□□□ -0.78
GTF3C1-209ENST00000568569 REV1Q9UBZ9 1251 aa10.16□□□□□ -0.78
GTF3C1-209ENST00000568569 RCE1Q9Y256 329 aa10.16□□□□□ -0.78
GTF3C1-209ENST00000568569 RASD1Q9Y272 281 aa10.16□□□□□ -0.78
GTF3C1-209ENST00000568569 LOC105371242A0A075B767 164 aa10.15□□□□□ -0.78
GTF3C1-209ENST00000568569 PRAMEF27A3QJZ7 478 aa10.15□□□□□ -0.78
GTF3C1-209ENST00000568569 A8MVM7 634 aa10.15□□□□□ -0.78
GTF3C1-209ENST00000568569 TMEM229AB2RXF0 380 aa10.15□□□□□ -0.78
GTF3C1-209ENST00000568569 WNT9BO14905 357 aa10.15□□□□□ -0.78
GTF3C1-209ENST00000568569 FRS3O43559 492 aa10.15□□□□□ -0.78
GTF3C1-209ENST00000568569 HPXP02790 462 aa10.15□□□□□ -0.78
GTF3C1-209ENST00000568569 CHRM4P08173 479 aa10.15□□□□□ -0.78
GTF3C1-209ENST00000568569 ANPEPP15144 967 aa10.15□□□□□ -0.78
GTF3C1-209ENST00000568569 NR4A1P22736 598 aa10.15□□□□□ -0.78
GTF3C1-209ENST00000568569 MRPS11P82912 194 aaKnown RBP10.15□□□□□ -0.78
GTF3C1-209ENST00000568569 ARF1P84077 181 aaKnown RBP10.15□□□□□ -0.78
GTF3C1-209ENST00000568569 MRPL2Q5T653 305 aaKnown RBP10.15□□□□□ -0.78
GTF3C1-209ENST00000568569 C1orf229Q6ZS94 237 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms