RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 GABRA6Q16445 453 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 KRTAP21-3Q3LHN1 58 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 ELOA3BQ3SY89 546 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 TSPO2Q5TGU0 170 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 C1orf140Q5VVS0 124 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 METTL21CQ5VZV1 264 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 TMEM225Q6GV28 225 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 DHRS4L2Q6PKH6 230 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 KLHL17Q6TDP4 642 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 C5orf46Q6UWT4 87 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 C6orf89Q6UWU4 347 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 TMEM108Q6UXF1 575 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 CLEC9AQ6UXN8 241 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 DLEU7Q6UYE1 221 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 CREB3L2Q70SY1 520 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 VASH1Q7L8A9 365 aaPredicted RBP4.21□□□□□ -1.74
CLK3-219ENST00000567805 AAED1Q7RTV5 226 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 ABHD12BQ7Z5M8 362 aaPredicted RBP4.21□□□□□ -1.74
CLK3-219ENST00000567805 ATG4DQ86TL0 474 aaPredicted RBP4.21□□□□□ -1.74
CLK3-219ENST00000567805 GPAT4Q86UL3 456 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 C17orf78Q8N4C9 275 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 TMEM99Q8N816 258 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 LSMEM1Q8N8F7 131 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 POMGNT2Q8NAT1 580 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 KBTBD8Q8NFY9 601 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 ELOA3Q8NG57 546 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 OR9K2Q8NGE7 335 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 OR52N5Q8NH56 324 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 MFSD8Q8NHS3 518 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 NFKBIDQ8NI38 313 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 TSPEARQ8WU66 669 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 SMAP2Q8WU79 429 aaPredicted RBP4.21□□□□□ -1.74
CLK3-219ENST00000567805 DNAJA4Q8WW22 397 aaPredicted RBP4.21□□□□□ -1.74
CLK3-219ENST00000567805 C3orf49Q96BT1 292 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 TRMT61AQ96FX7 289 aaKnown RBP4.21□□□□□ -1.74
CLK3-219ENST00000567805 BOD1Q96IK1 185 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 COX4I2Q96KJ9 171 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 MUS81Q96NY9 551 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 ZNF607Q96SK3 696 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 CPPED1Q9BRF8 314 aaPredicted RBP4.21□□□□□ -1.74
CLK3-219ENST00000567805 AMBRA1Q9C0C7 1298 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 GRIP2Q9C0E4 1043 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 SLCO5A1Q9H2Y9 848 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 GSX1Q9H4S2 264 aaPredicted RBP4.21□□□□□ -1.74
CLK3-219ENST00000567805 ZNF385DQ9H6B1 395 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 EVA1AQ9H8M9 152 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 SLC7A10Q9NS82 523 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 MRGBPQ9NV56 204 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 FAIMQ9NVQ4 179 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 ADPRHL2Q9NX46 363 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 NPAP1Q9NZP6 1156 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 SLAMF8Q9P0V8 285 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 RPS6KB2Q9UBS0 482 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.21□□□□□ -1.74
CLK3-219ENST00000567805 LEF1Q9UJU2 399 aaPredicted RBP4.21□□□□□ -1.74
CLK3-219ENST00000567805 MGAT4BQ9UQ53 548 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 LAMP3Q9UQV4 416 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 RASD1Q9Y272 281 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 AMDHD2Q9Y303 409 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 MAGED1Q9Y5V3 778 aaPredicted RBP4.21□□□□□ -1.74
CLK3-219ENST00000567805 SLC25A15Q9Y619 301 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 ACANP16112 2415 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 CR1P17927 2039 aa4.21□□□□□ -1.74
CLK3-219ENST00000567805 ROS1P08922 2347 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 A0A0G2JND7 137 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 A0A1B0GWA3 101 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 SHISA9B4DS77 424 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 FTCDNL1E5RQL4 147 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 ZNF587BE7ETH6 402 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 H7C1Q1 480 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 AIM2O14862 343 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 ANGPT2O15123 496 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 OR2T1O43869 369 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 TPST1O60507 370 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 EDF1O60869 148 aaKnown RBP4.2□□□□□ -1.74
CLK3-219ENST00000567805 SERPINB7O75635 380 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 KRT33AO76009 404 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 AHSA1O95433 338 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 WNT11O96014 354 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 SOD3P08294 240 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 HOXB4P17483 251 aaPredicted RBP4.2□□□□□ -1.74
CLK3-219ENST00000567805 PAX7P23759 505 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 CD40P25942 277 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 HTR2AP28223 471 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 GTF2E2P29084 291 aaKnown RBP4.2□□□□□ -1.74
CLK3-219ENST00000567805 RPS5P46782 204 aaKnown RBP4.2□□□□□ -1.74
CLK3-219ENST00000567805 CDH11P55287 796 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 FOXG1P55316 489 aaPredicted RBP4.2□□□□□ -1.74
CLK3-219ENST00000567805 RGS8P57771 180 aaPredicted RBP4.2□□□□□ -1.74
CLK3-219ENST00000567805 HOXC5Q00444 222 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 EGR4Q05215 589 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 RBBP4Q09028 425 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 SCARB2Q14108 478 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 ADRM1Q16186 407 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 CYP51A1Q16850 503 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 PGGHGQ32M88 737 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 GLIPR1L2Q4G1C9 344 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 RUNDC3AQ59EK9 446 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 ALG10BQ5I7T1 473 aa4.2□□□□□ -1.74
CLK3-219ENST00000567805 FAM69AQ5T7M9 428 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms