RNA–Protein interactions for RNA: ENST00000567406.5

CDR2-206, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-206ENST00000567406 IDO1P14902 403 aa13.32□□□□□ -0.28
CDR2-206ENST00000567406 MAP2K6P52564 334 aa13.32□□□□□ -0.28
CDR2-206ENST00000567406 EFNA4P52798 201 aa13.32□□□□□ -0.28
CDR2-206ENST00000567406 CRISP3P54108 245 aa13.32□□□□□ -0.28
CDR2-206ENST00000567406 DSCR9P59020 149 aa13.32□□□□□ -0.28
CDR2-206ENST00000567406 TXNL4AP83876 142 aaKnown RBP13.32□□□□□ -0.28
CDR2-206ENST00000567406 LOXL1Q08397 574 aaPredicted RBP13.32□□□□□ -0.28
CDR2-206ENST00000567406 LRRC74AQ0VAA2 488 aa13.32□□□□□ -0.28
CDR2-206ENST00000567406 ELOA3BQ3SY89 546 aa13.32□□□□□ -0.28
CDR2-206ENST00000567406 TBRG1Q3YBR2 411 aa13.32□□□□□ -0.28
CDR2-206ENST00000567406 C6orf10Q5SRN2 563 aa13.32□□□□□ -0.28
CDR2-206ENST00000567406 PRAMEF8Q5VWM4 474 aa13.32□□□□□ -0.28
CDR2-206ENST00000567406 PRAMEF7Q5VXH5 474 aa13.32□□□□□ -0.28
CDR2-206ENST00000567406 PODNL1Q6PEZ8 512 aa13.32□□□□□ -0.28
CDR2-206ENST00000567406 SLC2A7Q6PXP3 512 aa13.32□□□□□ -0.28
CDR2-206ENST00000567406 VHLLQ6RSH7 139 aa13.32□□□□□ -0.28
CDR2-206ENST00000567406 PHC2Q8IXK0 858 aa13.32□□□□□ -0.28
CDR2-206ENST00000567406 ANKS4BQ8N8V4 417 aa13.32□□□□□ -0.28
CDR2-206ENST00000567406 POMGNT2Q8NAT1 580 aa13.32□□□□□ -0.28
CDR2-206ENST00000567406 ELOA3Q8NG57 546 aa13.32□□□□□ -0.28
CDR2-206ENST00000567406 OR1K1Q8NGR3 316 aa13.32□□□□□ -0.28
CDR2-206ENST00000567406 MAELQ96JY0 434 aaKnown RBP13.32□□□□□ -0.28
CDR2-206ENST00000567406 KCNK17Q96T54 332 aa13.32□□□□□ -0.28
CDR2-206ENST00000567406 PRR14Q9BWN1 585 aa13.32□□□□□ -0.28
CDR2-206ENST00000567406 TMEM45AQ9NWC5 275 aa13.32□□□□□ -0.28
CDR2-206ENST00000567406 PCDHB14Q9Y5E9 798 aa13.32□□□□□ -0.28
CDR2-206ENST00000567406 PMF1-BGLAPU3KQ54 211 aa13.32□□□□□ -0.28
CDR2-206ENST00000567406 MALRD1Q5VYJ5 2156 aa13.32□□□□□ -0.28
CDR2-206ENST00000567406 NPIPB7O75200 414 aa13.31□□□□□ -0.28
CDR2-206ENST00000567406 F12P00748 615 aaPredicted RBP13.31□□□□□ -0.28
CDR2-206ENST00000567406 IGHV4-31P0DP07 118 aa13.31□□□□□ -0.28
CDR2-206ENST00000567406 ZNF16P17020 682 aaPredicted RBP13.31□□□□□ -0.28
CDR2-206ENST00000567406 CBLP22681 906 aa13.31□□□□□ -0.28
CDR2-206ENST00000567406 RPS5P46782 204 aaKnown RBP13.31□□□□□ -0.28
CDR2-206ENST00000567406 POLR2JP52435 117 aaKnown RBP13.31□□□□□ -0.28
CDR2-206ENST00000567406 MAGOHP61326 146 aaKnown RBP13.31□□□□□ -0.28
CDR2-206ENST00000567406 CHRNB3Q05901 458 aa13.31□□□□□ -0.28
CDR2-206ENST00000567406 LARS2Q15031 903 aaKnown RBP13.31□□□□□ -0.28
CDR2-206ENST00000567406 CARTPTQ16568 116 aa13.31□□□□□ -0.28
CDR2-206ENST00000567406 SWI5Q1ZZU3 235 aa13.31□□□□□ -0.28
CDR2-206ENST00000567406 ZNF311Q5JNZ3 666 aa13.31□□□□□ -0.28
CDR2-206ENST00000567406 RNF220Q5VTB9 566 aa13.31□□□□□ -0.28
CDR2-206ENST00000567406 IL17RELQ6ZVW7 336 aa13.31□□□□□ -0.28
CDR2-206ENST00000567406 BCL2L2Q92843 193 aaPredicted RBP13.31□□□□□ -0.28
CDR2-206ENST00000567406 KTI12Q96EK9 354 aaPredicted RBP13.31□□□□□ -0.28
CDR2-206ENST00000567406 ITCHQ96J02 903 aa13.31□□□□□ -0.28
CDR2-206ENST00000567406 SORCS2Q96PQ0 1159 aa13.31□□□□□ -0.28
CDR2-206ENST00000567406 SLC38A2Q96QD8 506 aa13.31□□□□□ -0.28
CDR2-206ENST00000567406 PTDSS2Q9BVG9 487 aa13.31□□□□□ -0.28
CDR2-206ENST00000567406 SPATA9Q9BWV2 254 aa13.31□□□□□ -0.28
CDR2-206ENST00000567406 CALML5Q9NZT1 146 aa13.31□□□□□ -0.28
CDR2-206ENST00000567406 ZNF232Q9UNY5 417 aa13.31□□□□□ -0.28
CDR2-206ENST00000567406 A0A0G2JPF8 293 aa13.3□□□□□ -0.28
CDR2-206ENST00000567406 TMEM229AB2RXF0 380 aa13.3□□□□□ -0.28
CDR2-206ENST00000567406 HNRNPCL2B2RXH8 293 aa13.3□□□□□ -0.28
CDR2-206ENST00000567406 HNRNPCL3B7ZW38 293 aa13.3□□□□□ -0.28
CDR2-206ENST00000567406 ZNF587BE7ETH6 402 aa13.3□□□□□ -0.28
CDR2-206ENST00000567406 UBDO15205 165 aa13.3□□□□□ -0.28
CDR2-206ENST00000567406 HNRNPCL1O60812 293 aaKnown RBP13.3□□□□□ -0.28
CDR2-206ENST00000567406 IFNA2P01563 188 aa13.3□□□□□ -0.28
CDR2-206ENST00000567406 CELA3BP08861 270 aa13.3□□□□□ -0.28
CDR2-206ENST00000567406 ZCCHC18P0CG32 403 aa13.3□□□□□ -0.28
CDR2-206ENST00000567406 HNRNPCL4P0DMR1 293 aa13.3□□□□□ -0.28
CDR2-206ENST00000567406 PNMTP11086 282 aa13.3□□□□□ -0.28
CDR2-206ENST00000567406 SLC25A16P16260 332 aa13.3□□□□□ -0.28
CDR2-206ENST00000567406 CALCRP30988 508 aa13.3□□□□□ -0.28
CDR2-206ENST00000567406 CLDN17P56750 224 aa13.3□□□□□ -0.28
CDR2-206ENST00000567406 VLDLRP98155 873 aa13.3□□□□□ -0.28
CDR2-206ENST00000567406 SRSF2Q01130 221 aaKnown RBP13.3□□□□□ -0.28
CDR2-206ENST00000567406 EGR4Q05215 589 aa13.3□□□□□ -0.28
CDR2-206ENST00000567406 GGTLC2Q14390 218 aa13.3□□□□□ -0.28
CDR2-206ENST00000567406 RGNQ15493 299 aa13.3□□□□□ -0.28
CDR2-206ENST00000567406 ANKRD16Q6P6B7 361 aa13.3□□□□□ -0.28
CDR2-206ENST00000567406 MYPOPQ86VE0 399 aaPredicted RBP13.3□□□□□ -0.28
CDR2-206ENST00000567406 COMTD1Q86VU5 262 aa13.3□□□□□ -0.28
CDR2-206ENST00000567406 GTF2H4Q92759 462 aa13.3□□□□□ -0.28
CDR2-206ENST00000567406 ZNF837Q96EG3 531 aaPredicted RBP13.3□□□□□ -0.28
CDR2-206ENST00000567406 VRK1Q99986 396 aaPredicted RBP13.3□□□□□ -0.28
CDR2-206ENST00000567406 PAIP1Q9H074 479 aaKnown RBP13.3□□□□□ -0.28
CDR2-206ENST00000567406 NELFAQ9H3P2 528 aa13.3□□□□□ -0.28
CDR2-206ENST00000567406 RMND5AQ9H871 391 aa13.3□□□□□ -0.28
CDR2-206ENST00000567406 SDR39U1Q9NRG7 319 aaPredicted RBP13.3□□□□□ -0.28
CDR2-206ENST00000567406 ZIM2Q9NZV7 527 aa13.3□□□□□ -0.28
CDR2-206ENST00000567406 FTCDNL1E5RQL4 147 aa13.29□□□□□ -0.28
CDR2-206ENST00000567406 SLCO1B7G3V0H7 640 aa13.29□□□□□ -0.28
CDR2-206ENST00000567406 CLIC1O00299 241 aa13.29□□□□□ -0.28
CDR2-206ENST00000567406 AHSA1O95433 338 aa13.29□□□□□ -0.28
CDR2-206ENST00000567406 CECR9P0C854 216 aa13.29□□□□□ -0.28
CDR2-206ENST00000567406 USF1P22415 310 aaPredicted RBP13.29□□□□□ -0.28
CDR2-206ENST00000567406 UBE2NP61088 152 aaKnown RBP13.29□□□□□ -0.28
CDR2-206ENST00000567406 ROR2Q01974 943 aaKnown RBP13.29□□□□□ -0.28
CDR2-206ENST00000567406 CYB5R2Q6BCY4 276 aa13.29□□□□□ -0.28
CDR2-206ENST00000567406 ABHD12BQ7Z5M8 362 aaPredicted RBP13.29□□□□□ -0.28
CDR2-206ENST00000567406 C10orf111Q8N326 155 aa13.29□□□□□ -0.28
CDR2-206ENST00000567406 STK35Q8TDR2 534 aa13.29□□□□□ -0.28
CDR2-206ENST00000567406 FOXN4Q96NZ1 517 aa13.29□□□□□ -0.28
CDR2-206ENST00000567406 KCNS3Q9BQ31 491 aa13.29□□□□□ -0.28
CDR2-206ENST00000567406 SLAMF8Q9P0V8 285 aa13.29□□□□□ -0.28
CDR2-206ENST00000567406 RASD1Q9Y272 281 aa13.29□□□□□ -0.28
CDR2-206ENST00000567406 SLC35F4A4IF30 521 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms