RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 KCNAB3O43448 404 aa13.39□□□□□ -0.27
PALB2-205ENST00000567003 ADRA2AP08913 450 aa13.39□□□□□ -0.27
PALB2-205ENST00000567003 NPR2P20594 1047 aa13.39□□□□□ -0.27
PALB2-205ENST00000567003 RIN1Q13671 783 aa13.39□□□□□ -0.27
PALB2-205ENST00000567003 SPANXN4Q5MJ08 99 aa13.39□□□□□ -0.27
PALB2-205ENST00000567003 C1QTNF12Q5T7M4 302 aa13.39□□□□□ -0.27
PALB2-205ENST00000567003 THSD4Q6ZMP0 1018 aa13.39□□□□□ -0.27
PALB2-205ENST00000567003 CREB3L2Q70SY1 520 aa13.39□□□□□ -0.27
PALB2-205ENST00000567003 ABHD12BQ7Z5M8 362 aaPredicted RBP13.39□□□□□ -0.27
PALB2-205ENST00000567003 CARM1Q86X55 608 aa13.39□□□□□ -0.27
PALB2-205ENST00000567003 EPHX4Q8IUS5 362 aa13.39□□□□□ -0.27
PALB2-205ENST00000567003 ZNF786Q8N393 782 aa13.39□□□□□ -0.27
PALB2-205ENST00000567003 NUP37Q8NFH4 326 aa13.39□□□□□ -0.27
PALB2-205ENST00000567003 OR4F15Q8NGB8 312 aa13.39□□□□□ -0.27
PALB2-205ENST00000567003 TCP10LQ8TDR4 215 aa13.39□□□□□ -0.27
PALB2-205ENST00000567003 UBASH3BQ8TF42 649 aa13.39□□□□□ -0.27
PALB2-205ENST00000567003 NEU4Q8WWR8 484 aaPredicted RBP13.39□□□□□ -0.27
PALB2-205ENST00000567003 DPY30Q9C005 99 aa13.39□□□□□ -0.27
PALB2-205ENST00000567003 AKTIPQ9H8T0 292 aa13.39□□□□□ -0.27
PALB2-205ENST00000567003 RLIMQ9NVW2 624 aa13.39□□□□□ -0.27
PALB2-205ENST00000567003 ASIC5Q9NY37 505 aa13.39□□□□□ -0.27
PALB2-205ENST00000567003 IGHV2OR16-5A0A0B4J2B6 119 aa13.38□□□□□ -0.27
PALB2-205ENST00000567003 PRSS51A0A1B0GVH4 220 aa13.38□□□□□ -0.27
PALB2-205ENST00000567003 OR6C65A6NJZ3 312 aa13.38□□□□□ -0.27
PALB2-205ENST00000567003 FRS3O43559 492 aa13.38□□□□□ -0.27
PALB2-205ENST00000567003 SEC14L2O76054 403 aa13.38□□□□□ -0.27
PALB2-205ENST00000567003 RPS4Y1P22090 263 aaKnown RBP13.38□□□□□ -0.27
PALB2-205ENST00000567003 CXCR1P25024 350 aa13.38□□□□□ -0.27
PALB2-205ENST00000567003 DVL1P1P54792 670 aaPredicted RBP13.38□□□□□ -0.27
PALB2-205ENST00000567003 ACTG1P63261 375 aa13.38□□□□□ -0.27
PALB2-205ENST00000567003 ARF1P84077 181 aaKnown RBP13.38□□□□□ -0.27
PALB2-205ENST00000567003 IL1RL1Q01638 556 aa13.38□□□□□ -0.27
PALB2-205ENST00000567003 ROR2Q01974 943 aaKnown RBP13.38□□□□□ -0.27
PALB2-205ENST00000567003 NPRL3Q12980 569 aa13.38□□□□□ -0.27
PALB2-205ENST00000567003 MAD2L1Q13257 205 aaPredicted RBP13.38□□□□□ -0.27
PALB2-205ENST00000567003 CASP8Q14790 479 aa13.38□□□□□ -0.27
PALB2-205ENST00000567003 MSMPQ1L6U9 139 aa13.38□□□□□ -0.27
PALB2-205ENST00000567003 TMEM225Q6GV28 225 aa13.38□□□□□ -0.27
PALB2-205ENST00000567003 CMIPQ8IY22 773 aa13.38□□□□□ -0.27
PALB2-205ENST00000567003 KDM8Q8N371 416 aa13.38□□□□□ -0.27
PALB2-205ENST00000567003 CADM2Q8N3J6 435 aa13.38□□□□□ -0.27
PALB2-205ENST00000567003 PNPT1Q8TCS8 783 aaKnown RBP13.38□□□□□ -0.27
PALB2-205ENST00000567003 CKAP2Q8WWK9 683 aa13.38□□□□□ -0.27
PALB2-205ENST00000567003 ZNF442Q9H7R0 627 aa13.38□□□□□ -0.27
PALB2-205ENST00000567003 FAAHO00519 579 aa13.37□□□□□ -0.27
PALB2-205ENST00000567003 ITM2AO43736 263 aa13.37□□□□□ -0.27
PALB2-205ENST00000567003 IGKV3-15P01624 115 aa13.37□□□□□ -0.27
PALB2-205ENST00000567003 CREB1P16220 341 aa13.37□□□□□ -0.27
PALB2-205ENST00000567003 IL7RP16871 459 aa13.37□□□□□ -0.27
PALB2-205ENST00000567003 EGR1P18146 543 aa13.37□□□□□ -0.27
PALB2-205ENST00000567003 CDKN2CP42773 168 aa13.37□□□□□ -0.27
PALB2-205ENST00000567003 NME5P56597 212 aa13.37□□□□□ -0.27
PALB2-205ENST00000567003 SNTB2Q13425 540 aaKnown RBP13.37□□□□□ -0.27
PALB2-205ENST00000567003 COX20Q5RI15 118 aa13.37□□□□□ -0.27
PALB2-205ENST00000567003 ANXA8L1Q5VT79 327 aa13.37□□□□□ -0.27
PALB2-205ENST00000567003 PRAMEF8Q5VWM4 474 aa13.37□□□□□ -0.27
PALB2-205ENST00000567003 PRAMEF7Q5VXH5 474 aa13.37□□□□□ -0.27
PALB2-205ENST00000567003 KRT80Q6KB66 452 aa13.37□□□□□ -0.27
PALB2-205ENST00000567003 ZNF836Q6ZNA1 936 aa13.37□□□□□ -0.27
PALB2-205ENST00000567003 VRK2Q86Y07 508 aa13.37□□□□□ -0.27
PALB2-205ENST00000567003 MAGEE2Q8TD90 523 aaPredicted RBP13.37□□□□□ -0.27
PALB2-205ENST00000567003 ZNF837Q96EG3 531 aaPredicted RBP13.37□□□□□ -0.27
PALB2-205ENST00000567003 PKNOX2Q96KN3 472 aa13.37□□□□□ -0.27
PALB2-205ENST00000567003 TRNT1Q96Q11 434 aaKnown RBP13.37□□□□□ -0.27
PALB2-205ENST00000567003 TAPBPLQ9BX59 468 aa13.37□□□□□ -0.27
PALB2-205ENST00000567003 PPCSQ9HAB8 311 aa13.37□□□□□ -0.27
PALB2-205ENST00000567003 SEC14L4Q9UDX3 406 aa13.37□□□□□ -0.27
PALB2-205ENST00000567003 TMEM229AB2RXF0 380 aa13.36□□□□□ -0.27
PALB2-205ENST00000567003 FAM157AC9JC47 383 aa13.36□□□□□ -0.27
PALB2-205ENST00000567003 WNT9BO14905 357 aa13.36□□□□□ -0.27
PALB2-205ENST00000567003 GSNP06396 782 aa13.36□□□□□ -0.27
PALB2-205ENST00000567003 BPGMP07738 259 aa13.36□□□□□ -0.27
PALB2-205ENST00000567003 ERCC1P07992 297 aaPredicted RBP13.36□□□□□ -0.27
PALB2-205ENST00000567003 PRG2P13727 222 aa13.36□□□□□ -0.27
PALB2-205ENST00000567003 UQCRBP14927 111 aa13.36□□□□□ -0.27
PALB2-205ENST00000567003 TCN1P20061 433 aaPredicted RBP13.36□□□□□ -0.27
PALB2-205ENST00000567003 SERPINB5P36952 375 aa13.36□□□□□ -0.27
PALB2-205ENST00000567003 ACAA2P42765 397 aaKnown RBP13.36□□□□□ -0.27
PALB2-205ENST00000567003 CLDN17P56750 224 aa13.36□□□□□ -0.27
PALB2-205ENST00000567003 MAPK11Q15759 364 aa13.36□□□□□ -0.27
PALB2-205ENST00000567003 C3orf36Q3SXR2 165 aa13.36□□□□□ -0.27
PALB2-205ENST00000567003 C1orf140Q5VVS0 124 aa13.36□□□□□ -0.27
PALB2-205ENST00000567003 LRRC74BQ6ZQY2 392 aa13.36□□□□□ -0.27
PALB2-205ENST00000567003 MDP1Q86V88 176 aa13.36□□□□□ -0.27
PALB2-205ENST00000567003 GLCCI1Q86VQ1 547 aa13.36□□□□□ -0.27
PALB2-205ENST00000567003 HOMEZQ8IX15 550 aa13.36□□□□□ -0.27
PALB2-205ENST00000567003 ZNF781Q8N8C0 355 aa13.36□□□□□ -0.27
PALB2-205ENST00000567003 CLDND2Q8NHS1 167 aa13.36□□□□□ -0.27
PALB2-205ENST00000567003 PIF1Q9H611 641 aa13.36□□□□□ -0.27
PALB2-205ENST00000567003 NOX3Q9HBY0 568 aa13.36□□□□□ -0.27
PALB2-205ENST00000567003 HIF1ANQ9NWT6 349 aa13.36□□□□□ -0.27
PALB2-205ENST00000567003 PCDHB14Q9Y5E9 798 aa13.36□□□□□ -0.27
PALB2-205ENST00000567003 DBIP07108 87 aaKnown RBP13.35□□□□□ -0.27
PALB2-205ENST00000567003 NR2F1P10589 423 aa13.35□□□□□ -0.27
PALB2-205ENST00000567003 CBR1P16152 277 aa13.35□□□□□ -0.27
PALB2-205ENST00000567003 CAPZA2P47755 286 aa13.35□□□□□ -0.27
PALB2-205ENST00000567003 DAG1Q14118 895 aa13.35□□□□□ -0.27
PALB2-205ENST00000567003 ELFN2Q5R3F8 820 aa13.35□□□□□ -0.27
PALB2-205ENST00000567003 DEF8Q6ZN54 512 aa13.35□□□□□ -0.27
PALB2-205ENST00000567003 SLC25A36Q96CQ1 311 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms