RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 PCDHGA9Q9Y5G4 932 aaKnown RBP15.35■□□□□ 0.05
CMTM3-213ENST00000566756 THADAQ6YHU6 1953 aa15.35■□□□□ 0.05
CMTM3-213ENST00000566756 A0A087WUJ7 227 aa15.35■□□□□ 0.05
CMTM3-213ENST00000566756 ADAM11O75078 769 aa15.35■□□□□ 0.05
CMTM3-213ENST00000566756 HNRNPKP61978 463 aaKnown RBP eCLIP15.35■□□□□ 0.05
CMTM3-213ENST00000566756 SKP1P63208 163 aa15.35■□□□□ 0.05
CMTM3-213ENST00000566756 KLF9Q13886 244 aaPredicted RBP15.35■□□□□ 0.05
CMTM3-213ENST00000566756 FAM69AQ5T7M9 428 aa15.35■□□□□ 0.05
CMTM3-213ENST00000566756 LUZP2Q86TE4 346 aa15.35■□□□□ 0.05
CMTM3-213ENST00000566756 OOSP2Q86WS3 158 aa15.35■□□□□ 0.05
CMTM3-213ENST00000566756 ARHGEF39Q8N4T4 335 aa15.35■□□□□ 0.05
CMTM3-213ENST00000566756 SDR9C7Q8NEX9 313 aa15.35■□□□□ 0.05
CMTM3-213ENST00000566756 OR11H7Q8NGC8 314 aa15.35■□□□□ 0.05
CMTM3-213ENST00000566756 OR56B4Q8NH76 319 aa15.35■□□□□ 0.05
CMTM3-213ENST00000566756 SNX33Q8WV41 574 aa15.35■□□□□ 0.05
CMTM3-213ENST00000566756 IRF2BPLQ9H1B7 796 aa15.35■□□□□ 0.05
CMTM3-213ENST00000566756 ZFP64Q9NPA5 681 aa15.35■□□□□ 0.05
CMTM3-213ENST00000566756 BRD7Q9NPI1 651 aa15.35■□□□□ 0.05
CMTM3-213ENST00000566756 UCKL1Q9NWZ5 548 aa15.35■□□□□ 0.05
CMTM3-213ENST00000566756 TRBV2A0A0J9YWF9 115 aa15.34■□□□□ 0.05
CMTM3-213ENST00000566756 OR5K3A6NET4 321 aa15.34■□□□□ 0.05
CMTM3-213ENST00000566756 IGKV1D-16P01601 117 aa15.34■□□□□ 0.05
CMTM3-213ENST00000566756 SNRPBP14678 240 aaKnown RBP15.34■□□□□ 0.05
CMTM3-213ENST00000566756 PVRP15151 417 aa15.34■□□□□ 0.05
CMTM3-213ENST00000566756 BCKDHBP21953 392 aa15.34■□□□□ 0.05
CMTM3-213ENST00000566756 SRP9P49458 86 aaKnown RBP15.34■□□□□ 0.05
CMTM3-213ENST00000566756 IGLV3-21P80748 117 aaPredicted RBP15.34■□□□□ 0.05
CMTM3-213ENST00000566756 CAMK2BQ13554 666 aa15.34■□□□□ 0.05
CMTM3-213ENST00000566756 KIRREL2Q6UWL6 708 aa15.34■□□□□ 0.05
CMTM3-213ENST00000566756 C17orf82Q86X59 251 aaPredicted RBP15.34■□□□□ 0.05
CMTM3-213ENST00000566756 ZNF440Q8IYI8 595 aa15.34■□□□□ 0.05
CMTM3-213ENST00000566756 ZNF614Q8N883 585 aa15.34■□□□□ 0.05
CMTM3-213ENST00000566756 OR13C5Q8NGS8 318 aa15.34■□□□□ 0.05
CMTM3-213ENST00000566756 OR4K13Q8NH42 304 aa15.34■□□□□ 0.05
CMTM3-213ENST00000566756 ADAMTS18Q8TE60 1221 aa15.34■□□□□ 0.05
CMTM3-213ENST00000566756 PHF21AQ96BD5 680 aa15.34■□□□□ 0.05
CMTM3-213ENST00000566756 ZNF578Q96N58 590 aaPredicted RBP15.34■□□□□ 0.05
CMTM3-213ENST00000566756 SLCO1C1Q9NYB5 712 aa15.34■□□□□ 0.05
CMTM3-213ENST00000566756 NCDNQ9UBB6 729 aa15.34■□□□□ 0.05
CMTM3-213ENST00000566756 ZNF337Q9Y3M9 751 aa15.34■□□□□ 0.05
CMTM3-213ENST00000566756 IER3IP1Q9Y5U9 82 aa15.34■□□□□ 0.05
CMTM3-213ENST00000566756 CACNA1IQ9P0X4 2223 aa15.34■□□□□ 0.05
CMTM3-213ENST00000566756 TRAV6A0A075B6T7 132 aa15.33■□□□□ 0.05
CMTM3-213ENST00000566756 B4DGG1 531 aa15.33■□□□□ 0.05
CMTM3-213ENST00000566756 SMLR1H3BR10 107 aa15.33■□□□□ 0.05
CMTM3-213ENST00000566756 AGRPO00253 132 aa15.33■□□□□ 0.05
CMTM3-213ENST00000566756 TPPPO94811 219 aa15.33■□□□□ 0.05
CMTM3-213ENST00000566756 CD3GP09693 182 aa15.33■□□□□ 0.05
CMTM3-213ENST00000566756 H2AFB2P0C5Z0 115 aa15.33■□□□□ 0.05
CMTM3-213ENST00000566756 PRPS1P60891 318 aa15.33■□□□□ 0.05
CMTM3-213ENST00000566756 DGCR2P98153 550 aa15.33■□□□□ 0.05
CMTM3-213ENST00000566756 GSG1Q2KHT4 349 aa15.33■□□□□ 0.05
CMTM3-213ENST00000566756 WDR45BQ5MNZ6 344 aa15.33■□□□□ 0.05
CMTM3-213ENST00000566756 ZBTB37Q5TC79 503 aa15.33■□□□□ 0.05
CMTM3-213ENST00000566756 DGAT2L6Q6ZPD8 337 aa15.33■□□□□ 0.05
CMTM3-213ENST00000566756 RFLNBQ8N5W9 214 aa15.33■□□□□ 0.05
CMTM3-213ENST00000566756 NPEPL1Q8NDH3 523 aa15.33■□□□□ 0.05
CMTM3-213ENST00000566756 ZNF431Q8TF32 576 aaPredicted RBP15.33■□□□□ 0.05
CMTM3-213ENST00000566756 CCDC3Q9BQI4 270 aa15.33■□□□□ 0.05
CMTM3-213ENST00000566756 ELF5Q9UKW6 265 aaPredicted RBP15.33■□□□□ 0.05
CMTM3-213ENST00000566756 TMEM131Q92545 1883 aa15.33■□□□□ 0.04
CMTM3-213ENST00000566756 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.33■□□□□ 0.04
CMTM3-213ENST00000566756 A0A1B0GVC2 190 aa15.33■□□□□ 0.04
CMTM3-213ENST00000566756 TRABD2BA6NFA1 517 aa15.33■□□□□ 0.04
CMTM3-213ENST00000566756 NAP1L6A6NFF2 107 aa15.33■□□□□ 0.04
CMTM3-213ENST00000566756 A6NIN4 97 aa15.33■□□□□ 0.04
CMTM3-213ENST00000566756 MCIDASD6RGH6 385 aa15.33■□□□□ 0.04
CMTM3-213ENST00000566756 SULT1B1O43704 296 aa15.33■□□□□ 0.04
CMTM3-213ENST00000566756 ECDO95905 644 aaPredicted RBP15.33■□□□□ 0.04
CMTM3-213ENST00000566756 SULT1A3P0DMM9 295 aa15.33■□□□□ 0.04
CMTM3-213ENST00000566756 SULT1A4P0DMN0 295 aa15.33■□□□□ 0.04
CMTM3-213ENST00000566756 EDNRAP25101 427 aa15.33■□□□□ 0.04
CMTM3-213ENST00000566756 GIFP27352 417 aa15.33■□□□□ 0.04
CMTM3-213ENST00000566756 VSX2P58304 361 aaPredicted RBP15.33■□□□□ 0.04
CMTM3-213ENST00000566756 SNRPD2P62316 118 aaKnown RBP15.33■□□□□ 0.04
CMTM3-213ENST00000566756 RPS4XP62701 263 aaKnown RBP15.33■□□□□ 0.04
CMTM3-213ENST00000566756 SNTB2Q13425 540 aaKnown RBP15.33■□□□□ 0.04
CMTM3-213ENST00000566756 SLC6A19Q695T7 634 aa15.33■□□□□ 0.04
CMTM3-213ENST00000566756 OGFOD3Q6PK18 319 aa15.33■□□□□ 0.04
CMTM3-213ENST00000566756 KCTD20Q7Z5Y7 419 aa15.33■□□□□ 0.04
CMTM3-213ENST00000566756 ARL14Q8N4G2 192 aa15.33■□□□□ 0.04
CMTM3-213ENST00000566756 LMX1AQ8TE12 382 aa15.33■□□□□ 0.04
CMTM3-213ENST00000566756 SMAP2Q8WU79 429 aaPredicted RBP15.33■□□□□ 0.04
CMTM3-213ENST00000566756 MARVELD3Q96A59 401 aa15.33■□□□□ 0.04
CMTM3-213ENST00000566756 RADILQ96JH8 1075 aa15.33■□□□□ 0.04
CMTM3-213ENST00000566756 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.33■□□□□ 0.04
CMTM3-213ENST00000566756 Q9N2J8 555 aa15.33■□□□□ 0.04
CMTM3-213ENST00000566756 POMT2Q9UKY4 750 aa15.33■□□□□ 0.04
CMTM3-213ENST00000566756 MEIKINA0A087WXM9 373 aa15.32■□□□□ 0.04
CMTM3-213ENST00000566756 LILRA5A6NI73 299 aa15.32■□□□□ 0.04
CMTM3-213ENST00000566756 LMO7DNF2Z398 122 aa15.32■□□□□ 0.04
CMTM3-213ENST00000566756 PRAMEF2O60811 474 aa15.32■□□□□ 0.04
CMTM3-213ENST00000566756 PRAF2O60831 178 aa15.32■□□□□ 0.04
CMTM3-213ENST00000566756 RDH16O75452 317 aa15.32■□□□□ 0.04
CMTM3-213ENST00000566756 OR7A10O76100 309 aa15.32■□□□□ 0.04
CMTM3-213ENST00000566756 APEHP13798 732 aaKnown RBP15.32■□□□□ 0.04
CMTM3-213ENST00000566756 OR3A3P47888 321 aa15.32■□□□□ 0.04
CMTM3-213ENST00000566756 P2RX3P56373 397 aa15.32■□□□□ 0.04
CMTM3-213ENST00000566756 MRPS10P82664 201 aaKnown RBP15.32■□□□□ 0.04
CMTM3-213ENST00000566756 COL28A1Q2UY09 1125 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms