RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 ZNF221Q9UK13 617 aa17.06■□□□□ 0.32
MSLN-207ENST00000566549 A0A0G2JK05 382 aa17.05■□□□□ 0.32
MSLN-207ENST00000566549 SEC14L5O43304 696 aa17.05■□□□□ 0.32
MSLN-207ENST00000566549 NUDT21O43809 227 aaKnown RBP17.05■□□□□ 0.32
MSLN-207ENST00000566549 CPNE3O75131 537 aaKnown RBP17.05■□□□□ 0.32
MSLN-207ENST00000566549 KRT8P05787 483 aa17.05■□□□□ 0.32
MSLN-207ENST00000566549 DCNP07585 359 aaKnown RBP17.05■□□□□ 0.32
MSLN-207ENST00000566549 MAP2K3P46734 347 aa17.05■□□□□ 0.32
MSLN-207ENST00000566549 ACTA2P62736 377 aa17.05■□□□□ 0.32
MSLN-207ENST00000566549 ACTG2P63267 376 aa17.05■□□□□ 0.32
MSLN-207ENST00000566549 SIRPAP78324 504 aa17.05■□□□□ 0.32
MSLN-207ENST00000566549 EBPQ15125 230 aaKnown RBP17.05■□□□□ 0.32
MSLN-207ENST00000566549 TRAM1Q15629 374 aa17.05■□□□□ 0.32
MSLN-207ENST00000566549 ELAVL1Q15717 326 aaKnown RBP17.05■□□□□ 0.32
MSLN-207ENST00000566549 ATAD3CQ5T2N8 411 aa17.05■□□□□ 0.32
MSLN-207ENST00000566549 HLA-DQA1Q5Y7H0 255 aa17.05■□□□□ 0.32
MSLN-207ENST00000566549 ZNF57Q68EA5 555 aaPredicted RBP17.05■□□□□ 0.32
MSLN-207ENST00000566549 PTCRAQ6ISU1 281 aaPredicted RBP17.05■□□□□ 0.32
MSLN-207ENST00000566549 SLITRK4Q8IW52 837 aa17.05■□□□□ 0.32
MSLN-207ENST00000566549 OR6F1Q8NGZ6 308 aa17.05■□□□□ 0.32
MSLN-207ENST00000566549 ACOT12Q8WYK0 555 aa17.05■□□□□ 0.32
MSLN-207ENST00000566549 SMIM19Q96E16 107 aa17.05■□□□□ 0.32
MSLN-207ENST00000566549 SLC19A3Q9BZV2 496 aa17.05■□□□□ 0.32
MSLN-207ENST00000566549 CHRNA10Q9GZZ6 450 aa17.05■□□□□ 0.32
MSLN-207ENST00000566549 CTSFQ9UBX1 484 aa17.05■□□□□ 0.32
MSLN-207ENST00000566549 CABIN1Q9Y6J0 2220 aa17.05■□□□□ 0.32
MSLN-207ENST00000566549 A0A0B4J293 547 aa17.05■□□□□ 0.32
MSLN-207ENST00000566549 TMEM221A6NGB7 291 aa17.05■□□□□ 0.32
MSLN-207ENST00000566549 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.05■□□□□ 0.32
MSLN-207ENST00000566549 AFF3P51826 1226 aaKnown RBP17.05■□□□□ 0.32
MSLN-207ENST00000566549 PLCXD2Q0VAA5 305 aa17.05■□□□□ 0.32
MSLN-207ENST00000566549 GGTLC2Q14390 218 aa17.05■□□□□ 0.32
MSLN-207ENST00000566549 METAP1DQ6UB28 335 aaPredicted RBP17.05■□□□□ 0.32
MSLN-207ENST00000566549 NCCRP1Q6ZVX7 275 aaPredicted RBP17.05■□□□□ 0.32
MSLN-207ENST00000566549 TRMT10AQ8TBZ6 339 aaKnown RBP17.05■□□□□ 0.32
MSLN-207ENST00000566549 LPAR4Q99677 370 aa17.05■□□□□ 0.32
MSLN-207ENST00000566549 MESP1Q9BRJ9 268 aa17.05■□□□□ 0.32
MSLN-207ENST00000566549 TMEM43Q9BTV4 400 aa17.05■□□□□ 0.32
MSLN-207ENST00000566549 BEX2Q9BXY8 128 aa17.05■□□□□ 0.32
MSLN-207ENST00000566549 HDHD2Q9H0R4 259 aa17.05■□□□□ 0.32
MSLN-207ENST00000566549 SRA1Q9HD15 236 aaKnown RBP17.05■□□□□ 0.32
MSLN-207ENST00000566549 DDX28Q9NUL7 540 aaKnown RBP17.05■□□□□ 0.32
MSLN-207ENST00000566549 NLKQ9UBE8 527 aa17.05■□□□□ 0.32
MSLN-207ENST00000566549 UNC13CQ8NB66 2214 aa17.04■□□□□ 0.32
MSLN-207ENST00000566549 A0A087WV48 116 aa17.04■□□□□ 0.32
MSLN-207ENST00000566549 IGHV3-20A0A0C4DH32 117 aa17.04■□□□□ 0.32
MSLN-207ENST00000566549 TCRBV16S1A1N1A0A5B0 115 aa17.04■□□□□ 0.32
MSLN-207ENST00000566549 PRR32B1ATL7 298 aa17.04■□□□□ 0.32
MSLN-207ENST00000566549 CD53P19397 219 aa17.04■□□□□ 0.32
MSLN-207ENST00000566549 ADH7P40394 386 aa17.04■□□□□ 0.32
MSLN-207ENST00000566549 MAGEB1P43366 347 aa17.04■□□□□ 0.32
MSLN-207ENST00000566549 CDONQ4KMG0 1287 aa17.04■□□□□ 0.32
MSLN-207ENST00000566549 MS4A15Q8N5U1 240 aa17.04■□□□□ 0.32
MSLN-207ENST00000566549 LRFN5Q96NI6 719 aa17.04■□□□□ 0.32
MSLN-207ENST00000566549 ALG12Q9BV10 488 aa17.04■□□□□ 0.32
MSLN-207ENST00000566549 NMNAT2Q9BZQ4 307 aa17.04■□□□□ 0.32
MSLN-207ENST00000566549 VN1R1Q9GZP7 353 aa17.04■□□□□ 0.32
MSLN-207ENST00000566549 RNF121Q9H920 327 aa17.04■□□□□ 0.32
MSLN-207ENST00000566549 FGF21Q9NSA1 209 aa17.04■□□□□ 0.32
MSLN-207ENST00000566549 WDFY3Q8IZQ1 3526 aa17.04■□□□□ 0.32
MSLN-207ENST00000566549 DCTN6O00399 190 aa17.04■□□□□ 0.32
MSLN-207ENST00000566549 RAB3BP20337 219 aa17.04■□□□□ 0.32
MSLN-207ENST00000566549 TALDO1P37837 337 aa17.04■□□□□ 0.32
MSLN-207ENST00000566549 RPL18Q07020 188 aaKnown RBP17.04■□□□□ 0.32
MSLN-207ENST00000566549 BIKQ13323 160 aa17.04■□□□□ 0.32
MSLN-207ENST00000566549 TBRG1Q3YBR2 411 aa17.04■□□□□ 0.32
MSLN-207ENST00000566549 C1QL3Q5VWW1 255 aa17.04■□□□□ 0.32
MSLN-207ENST00000566549 ASB18Q6ZVZ8 466 aa17.04■□□□□ 0.32
MSLN-207ENST00000566549 RDH10Q8IZV5 341 aa17.04■□□□□ 0.32
MSLN-207ENST00000566549 D2HGDHQ8N465 521 aa17.04■□□□□ 0.32
MSLN-207ENST00000566549 CHAC2Q8WUX2 184 aa17.04■□□□□ 0.32
MSLN-207ENST00000566549 TAAR8Q969N4 342 aa17.04■□□□□ 0.32
MSLN-207ENST00000566549 MVB12AQ96EY5 273 aa17.04■□□□□ 0.32
MSLN-207ENST00000566549 FRMD6Q96NE9 622 aa17.04■□□□□ 0.32
MSLN-207ENST00000566549 PCED1AQ9H1Q7 454 aa17.04■□□□□ 0.32
MSLN-207ENST00000566549 NEK6Q9HC98 313 aa17.04■□□□□ 0.32
MSLN-207ENST00000566549 HIF3AQ9Y2N7 669 aa17.04■□□□□ 0.32
MSLN-207ENST00000566549 VPS13AQ96RL7 3174 aa17.03■□□□□ 0.32
MSLN-207ENST00000566549 LYRM1O43325 122 aa17.03■□□□□ 0.32
MSLN-207ENST00000566549 LANCL1O43813 399 aa17.03■□□□□ 0.32
MSLN-207ENST00000566549 SCO2O43819 266 aa17.03■□□□□ 0.32
MSLN-207ENST00000566549 CD14P08571 375 aa17.03■□□□□ 0.32
MSLN-207ENST00000566549 GLB1P16278 677 aa17.03■□□□□ 0.32
MSLN-207ENST00000566549 STARD6P59095 220 aa17.03■□□□□ 0.32
MSLN-207ENST00000566549 QPRTQ15274 297 aa17.03■□□□□ 0.32
MSLN-207ENST00000566549 PLET1Q6UQ28 207 aa17.03■□□□□ 0.32
MSLN-207ENST00000566549 NANOGNBQ7Z5D8 188 aa17.03■□□□□ 0.32
MSLN-207ENST00000566549 LRRC28Q86X40 367 aaPredicted RBP17.03■□□□□ 0.32
MSLN-207ENST00000566549 SPEM1Q8N4L4 309 aa17.03■□□□□ 0.32
MSLN-207ENST00000566549 CAPSLQ8WWF8 208 aa17.03■□□□□ 0.32
MSLN-207ENST00000566549 NPAP1Q9NZP6 1156 aa17.03■□□□□ 0.32
MSLN-207ENST00000566549 NUFIP1Q9UHK0 495 aaKnown RBP17.03■□□□□ 0.32
MSLN-207ENST00000566549 MRTO4Q9UKD2 239 aaKnown RBP17.03■□□□□ 0.32
MSLN-207ENST00000566549 ATXN7L1Q9ULK2 861 aaPredicted RBP17.03■□□□□ 0.32
MSLN-207ENST00000566549 PCDHGB7Q9Y5F8 929 aa17.03■□□□□ 0.32
MSLN-207ENST00000566549 CFAP54Q96N23 3096 aa17.03■□□□□ 0.32
MSLN-207ENST00000566549 TVP23AA6NH52 213 aa17.02■□□□□ 0.32
MSLN-207ENST00000566549 NDUFB5O43674 189 aa17.02■□□□□ 0.32
MSLN-207ENST00000566549 RPP14O95059 124 aaKnown RBP17.02■□□□□ 0.32
MSLN-207ENST00000566549 PRKAR1AP10644 381 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms