RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 PLEKHA8Q96JA3 519 aa3.77□□□□□ -1.81
CNOT1-209ENST00000566240 MRPL45Q9BRJ2 306 aaKnown RBP3.77□□□□□ -1.81
CNOT1-209ENST00000566240 SUDS3Q9H7L9 328 aaPredicted RBP3.77□□□□□ -1.81
CNOT1-209ENST00000566240 ISG20L2Q9H9L3 353 aaKnown RBP3.77□□□□□ -1.81
CNOT1-209ENST00000566240 FOLH1BQ9HBA9 442 aa3.77□□□□□ -1.81
CNOT1-209ENST00000566240 KCNIP3Q9Y2W7 256 aa3.77□□□□□ -1.81
CNOT1-209ENST00000566240 GCC2Q8IWJ2 1684 aa3.77□□□□□ -1.81
CNOT1-209ENST00000566240 ADGBQ8N7X0 1667 aa3.77□□□□□ -1.81
CNOT1-209ENST00000566240 PTPN23Q9H3S7 1636 aa3.77□□□□□ -1.81
CNOT1-209ENST00000566240 SH3TC1Q8TE82 1336 aa3.76□□□□□ -1.81
CNOT1-209ENST00000566240 ZNF608Q9ULD9 1512 aaPredicted RBP3.76□□□□□ -1.81
CNOT1-209ENST00000566240 COL5A2P05997 1499 aaPredicted RBP3.76□□□□□ -1.81
CNOT1-209ENST00000566240 IGKV1D-8A0A087WSZ0 117 aa3.76□□□□□ -1.81
CNOT1-209ENST00000566240 IGHV7-81A0A0B4J1V7 117 aa3.76□□□□□ -1.81
CNOT1-209ENST00000566240 A0A0G2JRQ6 117 aa3.76□□□□□ -1.81
CNOT1-209ENST00000566240 OR5B21A6NL26 309 aa3.76□□□□□ -1.81
CNOT1-209ENST00000566240 CACNG3O60359 315 aa3.76□□□□□ -1.81
CNOT1-209ENST00000566240 TOM1O60784 492 aa3.76□□□□□ -1.81
CNOT1-209ENST00000566240 TMEM50AO95807 157 aa3.76□□□□□ -1.81
CNOT1-209ENST00000566240 LGI1O95970 557 aa3.76□□□□□ -1.81
CNOT1-209ENST00000566240 SEMG1P04279 462 aa3.76□□□□□ -1.81
CNOT1-209ENST00000566240 PRKAR2BP31323 418 aa3.76□□□□□ -1.81
CNOT1-209ENST00000566240 MEOX2P50222 304 aa3.76□□□□□ -1.81
CNOT1-209ENST00000566240 PPIL2Q13356 520 aa3.76□□□□□ -1.81
CNOT1-209ENST00000566240 MICBQ29980 383 aa3.76□□□□□ -1.81
CNOT1-209ENST00000566240 KLF17Q5JT82 389 aaPredicted RBP3.76□□□□□ -1.81
CNOT1-209ENST00000566240 SAMD4BQ5PRF9 694 aaKnown RBP3.76□□□□□ -1.81
CNOT1-209ENST00000566240 RAET1LQ5VY80 246 aa3.76□□□□□ -1.81
CNOT1-209ENST00000566240 LRRC66Q68CR7 880 aa3.76□□□□□ -1.81
CNOT1-209ENST00000566240 ZNF677Q86XU0 584 aa3.76□□□□□ -1.81
CNOT1-209ENST00000566240 PSTKQ8IV42 348 aaKnown RBP3.76□□□□□ -1.81
CNOT1-209ENST00000566240 TPRX1Q8N7U7 411 aa3.76□□□□□ -1.81
CNOT1-209ENST00000566240 FOXN4Q96NZ1 517 aa3.76□□□□□ -1.81
CNOT1-209ENST00000566240 KCNA7Q96RP8 456 aa3.76□□□□□ -1.81
CNOT1-209ENST00000566240 ZNF184Q99676 751 aaPredicted RBP3.76□□□□□ -1.81
CNOT1-209ENST00000566240 CENPKQ9BS16 269 aa3.76□□□□□ -1.81
CNOT1-209ENST00000566240 NEK6Q9HC98 313 aa3.76□□□□□ -1.81
CNOT1-209ENST00000566240 PSMC3IPQ9P2W1 217 aaPredicted RBP3.76□□□□□ -1.81
CNOT1-209ENST00000566240 Q9UF83 564 aa3.76□□□□□ -1.81
CNOT1-209ENST00000566240 DCDC2Q9UHG0 476 aa3.76□□□□□ -1.81
CNOT1-209ENST00000566240 ADCY10Q96PN6 1610 aa3.76□□□□□ -1.81
CNOT1-209ENST00000566240 CEP170Q5SW79 1584 aa3.76□□□□□ -1.81
CNOT1-209ENST00000566240 OR2AG2A6NM03 316 aa3.75□□□□□ -1.81
CNOT1-209ENST00000566240 TCP11X1B4DZS4 312 aa3.75□□□□□ -1.81
CNOT1-209ENST00000566240 LOC110117498-PIK3R3F6TDL0 507 aa3.75□□□□□ -1.81
CNOT1-209ENST00000566240 MBTPS2O43462 519 aa3.75□□□□□ -1.81
CNOT1-209ENST00000566240 BCL2L11O43521 198 aa3.75□□□□□ -1.81
CNOT1-209ENST00000566240 KRT14P02533 472 aa3.75□□□□□ -1.81
CNOT1-209ENST00000566240 GSSP48637 474 aa3.75□□□□□ -1.81
CNOT1-209ENST00000566240 RGS19P49795 217 aa3.75□□□□□ -1.81
CNOT1-209ENST00000566240 GPM6AP51674 278 aa3.75□□□□□ -1.81
CNOT1-209ENST00000566240 KPNA2P52292 529 aaKnown RBP3.75□□□□□ -1.81
CNOT1-209ENST00000566240 GNMTQ14749 295 aa3.75□□□□□ -1.81
CNOT1-209ENST00000566240 DGUOKQ16854 277 aa3.75□□□□□ -1.81
CNOT1-209ENST00000566240 PARP15Q460N3 678 aa3.75□□□□□ -1.81
CNOT1-209ENST00000566240 UNQ9370/PRO34162Q6UXP9 181 aa3.75□□□□□ -1.81
CNOT1-209ENST00000566240 LRRC74BQ6ZQY2 392 aa3.75□□□□□ -1.81
CNOT1-209ENST00000566240 C19orf35Q6ZS72 473 aa3.75□□□□□ -1.81
CNOT1-209ENST00000566240 PPP1R27Q86WC6 154 aa3.75□□□□□ -1.81
CNOT1-209ENST00000566240 ERI1Q8IV48 349 aaKnown RBP3.75□□□□□ -1.81
CNOT1-209ENST00000566240 SLC39A11Q8N1S5 342 aa3.75□□□□□ -1.81
CNOT1-209ENST00000566240 NEIL2Q969S2 332 aa3.75□□□□□ -1.81
CNOT1-209ENST00000566240 MBOAT4Q96T53 435 aa3.75□□□□□ -1.81
CNOT1-209ENST00000566240 CHP1Q99653 195 aa3.75□□□□□ -1.81
CNOT1-209ENST00000566240 RIOK1Q9BRS2 568 aaKnown RBP3.75□□□□□ -1.81
CNOT1-209ENST00000566240 DEFB126Q9BYW3 111 aa3.75□□□□□ -1.81
CNOT1-209ENST00000566240 NCOR1P1Q9H4R4 102 aa3.75□□□□□ -1.81
CNOT1-209ENST00000566240 ZNF702PQ9H963 129 aa3.75□□□□□ -1.81
CNOT1-209ENST00000566240 N6AMT1Q9Y5N5 214 aa3.75□□□□□ -1.81
CNOT1-209ENST00000566240 EPRSP07814 1512 aaKnown RBP3.75□□□□□ -1.81
CNOT1-209ENST00000566240 CROCC2H7BZ55 1655 aa3.75□□□□□ -1.81
CNOT1-209ENST00000566240 TTC21BQ7Z4L5 1316 aa3.74□□□□□ -1.81
CNOT1-209ENST00000566240 NCOA2Q15596 1464 aa3.74□□□□□ -1.81
CNOT1-209ENST00000566240 SERTM2A0A1B0GWG4 89 aa3.74□□□□□ -1.81
CNOT1-209ENST00000566240 PSTPIP1O43586 416 aa3.74□□□□□ -1.81
CNOT1-209ENST00000566240 DFNA5O60443 496 aa3.74□□□□□ -1.81
CNOT1-209ENST00000566240 SERF1AO75920 110 aa3.74□□□□□ -1.81
CNOT1-209ENST00000566240 OR7A10O76100 309 aa3.74□□□□□ -1.81
CNOT1-209ENST00000566240 GAS8-AS1O95177 125 aa3.74□□□□□ -1.81
CNOT1-209ENST00000566240 SERPIND1P05546 499 aa3.74□□□□□ -1.81
CNOT1-209ENST00000566240 KLK3P07288 261 aaPredicted RBP3.74□□□□□ -1.81
CNOT1-209ENST00000566240 CT62P0C5K7 136 aa3.74□□□□□ -1.81
CNOT1-209ENST00000566240 UBTFL1P0CB47 393 aaPredicted RBP3.74□□□□□ -1.81
CNOT1-209ENST00000566240 SHMT2P34897 504 aa3.74□□□□□ -1.81
CNOT1-209ENST00000566240 SYKP43405 635 aa3.74□□□□□ -1.81
CNOT1-209ENST00000566240 OR3A4PP47883 348 aa3.74□□□□□ -1.81
CNOT1-209ENST00000566240 P2RY4P51582 365 aa3.74□□□□□ -1.81
CNOT1-209ENST00000566240 CDH6P55285 790 aa3.74□□□□□ -1.81
CNOT1-209ENST00000566240 KCNJ2P63252 427 aa3.74□□□□□ -1.81
CNOT1-209ENST00000566240 PRR30Q53SZ7 412 aaPredicted RBP3.74□□□□□ -1.81
CNOT1-209ENST00000566240 SPANXN2Q5MJ10 180 aa3.74□□□□□ -1.81
CNOT1-209ENST00000566240 UTF1Q5T230 341 aa3.74□□□□□ -1.81
CNOT1-209ENST00000566240 MYOM3Q5VTT5 1437 aa3.74□□□□□ -1.81
CNOT1-209ENST00000566240 C11orf71Q6IPW1 123 aa3.74□□□□□ -1.81
CNOT1-209ENST00000566240 BAIAP2L2Q6UXY1 529 aa3.74□□□□□ -1.81
CNOT1-209ENST00000566240 FGD6Q6ZV73 1430 aa3.74□□□□□ -1.81
CNOT1-209ENST00000566240 ZNF589Q86UQ0 364 aaPredicted RBP3.74□□□□□ -1.81
CNOT1-209ENST00000566240 ZNF525Q8N782 197 aa3.74□□□□□ -1.81
CNOT1-209ENST00000566240 CCDC148Q8NFR7 591 aa3.74□□□□□ -1.81
CNOT1-209ENST00000566240 OR9A1PQ8NGU1 263 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms