RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 GPR52Q9Y2T5 361 aa12.27□□□□□ -0.45
HERPUD1-210ENST00000565966 TESMINQ9Y4I5 508 aa12.27□□□□□ -0.45
HERPUD1-210ENST00000565966 CSMD2Q7Z408 3487 aa12.27□□□□□ -0.45
HERPUD1-210ENST00000565966 HEATR1Q9H583 2144 aaKnown RBP12.26□□□□□ -0.45
HERPUD1-210ENST00000565966 MYO9AB2RTY4 2548 aa12.26□□□□□ -0.45
HERPUD1-210ENST00000565966 FZD7O75084 574 aa12.26□□□□□ -0.45
HERPUD1-210ENST00000565966 UBOX5O94941 541 aa12.26□□□□□ -0.45
HERPUD1-210ENST00000565966 AKR7A3O95154 331 aa12.26□□□□□ -0.45
HERPUD1-210ENST00000565966 PPP3CBP16298 524 aa12.26□□□□□ -0.45
HERPUD1-210ENST00000565966 PSMB1P20618 241 aaKnown RBP12.26□□□□□ -0.45
HERPUD1-210ENST00000565966 PTNP21246 168 aa12.26□□□□□ -0.45
HERPUD1-210ENST00000565966 CCKARP32238 428 aa12.26□□□□□ -0.45
HERPUD1-210ENST00000565966 MSX2P35548 267 aaPredicted RBP12.26□□□□□ -0.45
HERPUD1-210ENST00000565966 OTUD3Q5T2D3 398 aaPredicted RBP12.26□□□□□ -0.45
HERPUD1-210ENST00000565966 FBXW10Q5XX13 1052 aa12.26□□□□□ -0.45
HERPUD1-210ENST00000565966 DEF8Q6ZN54 512 aa12.26□□□□□ -0.45
HERPUD1-210ENST00000565966 GABRG1Q8N1C3 465 aa12.26□□□□□ -0.45
HERPUD1-210ENST00000565966 TMEM99Q8N816 258 aa12.26□□□□□ -0.45
HERPUD1-210ENST00000565966 TAAR8Q969N4 342 aa12.26□□□□□ -0.45
HERPUD1-210ENST00000565966 SLC41A3Q96GZ6 507 aa12.26□□□□□ -0.45
HERPUD1-210ENST00000565966 HSH2DQ96JZ2 352 aa12.26□□□□□ -0.45
HERPUD1-210ENST00000565966 TMEM43Q9BTV4 400 aa12.26□□□□□ -0.45
HERPUD1-210ENST00000565966 HDHD5Q9BXW7 423 aa12.26□□□□□ -0.45
HERPUD1-210ENST00000565966 POLR2J2Q9GZM3 115 aaKnown RBP12.26□□□□□ -0.45
HERPUD1-210ENST00000565966 POLR2J3Q9H1A7 115 aaKnown RBP12.26□□□□□ -0.45
HERPUD1-210ENST00000565966 OR10A4Q9H209 315 aa12.26□□□□□ -0.45
HERPUD1-210ENST00000565966 SLC7A7Q9UM01 511 aa12.26□□□□□ -0.45
HERPUD1-210ENST00000565966 NOSIPQ9Y314 301 aaKnown RBP12.26□□□□□ -0.45
HERPUD1-210ENST00000565966 ALPK2Q86TB3 2170 aa12.25□□□□□ -0.45
HERPUD1-210ENST00000565966 TRAV36DV7A0A075B6V5 113 aa12.25□□□□□ -0.45
HERPUD1-210ENST00000565966 AQP7P3A6NL99 342 aa12.25□□□□□ -0.45
HERPUD1-210ENST00000565966 OR2T1O43869 369 aa12.25□□□□□ -0.45
HERPUD1-210ENST00000565966 CNOT4O95628 575 aaKnown RBP12.25□□□□□ -0.45
HERPUD1-210ENST00000565966 P2RY4P51582 365 aa12.25□□□□□ -0.45
HERPUD1-210ENST00000565966 LTBQ06643 244 aa12.25□□□□□ -0.45
HERPUD1-210ENST00000565966 PIN1Q13526 163 aaPredicted RBP12.25□□□□□ -0.45
HERPUD1-210ENST00000565966 SLC17A1Q14916 467 aa12.25□□□□□ -0.45
HERPUD1-210ENST00000565966 P2RY6Q15077 328 aa12.25□□□□□ -0.45
HERPUD1-210ENST00000565966 SPATS1Q496A3 300 aa12.25□□□□□ -0.45
HERPUD1-210ENST00000565966 IFI44LQ53G44 452 aa12.25□□□□□ -0.45
HERPUD1-210ENST00000565966 SFRP5Q5T4F7 317 aa12.25□□□□□ -0.45
HERPUD1-210ENST00000565966 FAM69AQ5T7M9 428 aa12.25□□□□□ -0.45
HERPUD1-210ENST00000565966 ANKRD34AQ69YU3 496 aa12.25□□□□□ -0.45
HERPUD1-210ENST00000565966 Q6ZT83 130 aa12.25□□□□□ -0.45
HERPUD1-210ENST00000565966 CXorf67Q86X51 503 aaPredicted RBP12.25□□□□□ -0.45
HERPUD1-210ENST00000565966 ZNF100Q8IYN0 542 aa12.25□□□□□ -0.45
HERPUD1-210ENST00000565966 OR6S1Q8NH40 331 aa12.25□□□□□ -0.45
HERPUD1-210ENST00000565966 GEMIN6Q8WXD5 167 aaKnown RBP12.25□□□□□ -0.45
HERPUD1-210ENST00000565966 SLC25A36Q96CQ1 311 aa12.25□□□□□ -0.45
HERPUD1-210ENST00000565966 MPP4Q96JB8 637 aa12.25□□□□□ -0.45
HERPUD1-210ENST00000565966 PRSS27Q9BQR3 290 aa12.25□□□□□ -0.45
HERPUD1-210ENST00000565966 AMBRA1Q9C0C7 1298 aa12.25□□□□□ -0.45
HERPUD1-210ENST00000565966 GORASP2Q9H8Y8 452 aa12.25□□□□□ -0.45
HERPUD1-210ENST00000565966 DCAF13Q9NV06 445 aaKnown RBP12.25□□□□□ -0.45
HERPUD1-210ENST00000565966 TAS2R1Q9NYW7 299 aa12.25□□□□□ -0.45
HERPUD1-210ENST00000565966 MAGEL2Q9UJ55 1249 aa12.25□□□□□ -0.45
HERPUD1-210ENST00000565966 RIMS3Q9UJD0 308 aa12.25□□□□□ -0.45
HERPUD1-210ENST00000565966 RPS6KA6Q9UK32 745 aa12.25□□□□□ -0.45
HERPUD1-210ENST00000565966 HRNRQ86YZ3 2850 aaPredicted RBP12.25□□□□□ -0.45
HERPUD1-210ENST00000565966 CCDC168Q8NDH2 2452 aa12.25□□□□□ -0.45
HERPUD1-210ENST00000565966 ARPC2O15144 300 aa12.24□□□□□ -0.45
HERPUD1-210ENST00000565966 DSCAMO60469 2012 aa12.24□□□□□ -0.45
HERPUD1-210ENST00000565966 MRPL33O75394 65 aaKnown RBP12.24□□□□□ -0.45
HERPUD1-210ENST00000565966 GMNNO75496 209 aa12.24□□□□□ -0.45
HERPUD1-210ENST00000565966 VAMP5O95183 116 aa12.24□□□□□ -0.45
HERPUD1-210ENST00000565966 OR5F1O95221 314 aa12.24□□□□□ -0.45
HERPUD1-210ENST00000565966 ADAP00813 363 aa12.24□□□□□ -0.45
HERPUD1-210ENST00000565966 BGLAPP02818 100 aa12.24□□□□□ -0.45
HERPUD1-210ENST00000565966 HRGP04196 525 aa12.24□□□□□ -0.45
HERPUD1-210ENST00000565966 IFNW1P05000 195 aa12.24□□□□□ -0.45
HERPUD1-210ENST00000565966 ROS1P08922 2347 aa12.24□□□□□ -0.45
HERPUD1-210ENST00000565966 CRYGSP22914 178 aa12.24□□□□□ -0.45
HERPUD1-210ENST00000565966 EDNRAP25101 427 aa12.24□□□□□ -0.45
HERPUD1-210ENST00000565966 TAS2R41P59536 307 aa12.24□□□□□ -0.45
HERPUD1-210ENST00000565966 ITGADQ13349 1161 aa12.24□□□□□ -0.45
HERPUD1-210ENST00000565966 TMEM225Q6GV28 225 aa12.24□□□□□ -0.45
HERPUD1-210ENST00000565966 TTC33Q6PID6 262 aaPredicted RBP12.24□□□□□ -0.45
HERPUD1-210ENST00000565966 C22orf34Q6ZV56 151 aa12.24□□□□□ -0.45
HERPUD1-210ENST00000565966 FKBP9P1Q75LS8 142 aa12.24□□□□□ -0.45
HERPUD1-210ENST00000565966 CDC20BQ86Y33 519 aa12.24□□□□□ -0.45
HERPUD1-210ENST00000565966 NKAIN4Q8IVV8 208 aa12.24□□□□□ -0.45
HERPUD1-210ENST00000565966 ARHGAP24Q8N264 748 aa12.24□□□□□ -0.45
HERPUD1-210ENST00000565966 STEAP2Q8NFT2 490 aa12.24□□□□□ -0.45
HERPUD1-210ENST00000565966 ZC3HAV1LQ96H79 300 aaKnown RBP12.24□□□□□ -0.45
HERPUD1-210ENST00000565966 PRRC1Q96M27 445 aa12.24□□□□□ -0.45
HERPUD1-210ENST00000565966 EPYCQ99645 322 aa12.24□□□□□ -0.45
HERPUD1-210ENST00000565966 ZNF426Q9BUY5 554 aa12.24□□□□□ -0.45
HERPUD1-210ENST00000565966 SF3B5Q9BWJ5 86 aaKnown RBP12.24□□□□□ -0.45
HERPUD1-210ENST00000565966 C1orf21Q9H246 121 aa12.24□□□□□ -0.45
HERPUD1-210ENST00000565966 PARPBPQ9NWS1 579 aa12.24□□□□□ -0.45
HERPUD1-210ENST00000565966 PRSS50Q9UI38 385 aa12.24□□□□□ -0.45
HERPUD1-210ENST00000565966 A4GNTQ9UNA3 340 aa12.24□□□□□ -0.45
HERPUD1-210ENST00000565966 SNX13Q9Y5W8 968 aa12.24□□□□□ -0.45
HERPUD1-210ENST00000565966 FLVCR1Q9Y5Y0 555 aa12.24□□□□□ -0.45
HERPUD1-210ENST00000565966 J3KTA2 159 aa12.23□□□□□ -0.45
HERPUD1-210ENST00000565966 CBLP22681 906 aa12.23□□□□□ -0.45
HERPUD1-210ENST00000565966 GTF2E2P29084 291 aaKnown RBP12.23□□□□□ -0.45
HERPUD1-210ENST00000565966 GRPRP30550 384 aa12.23□□□□□ -0.45
HERPUD1-210ENST00000565966 NTF4P34130 210 aa12.23□□□□□ -0.45
HERPUD1-210ENST00000565966 YAP1P46937 504 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms