RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 ARIH2OSQ8N7S6 290 aa7.47□□□□□ -1.21
CAPN3-213ENST00000565173 OR1K1Q8NGR3 316 aa7.47□□□□□ -1.21
CAPN3-213ENST00000565173 MAGEE2Q8TD90 523 aaPredicted RBP7.47□□□□□ -1.21
CAPN3-213ENST00000565173 TMEM158Q8WZ71 300 aa7.47□□□□□ -1.21
CAPN3-213ENST00000565173 VPS33AQ96AX1 596 aa7.47□□□□□ -1.21
CAPN3-213ENST00000565173 C3orf49Q96BT1 292 aa7.47□□□□□ -1.21
CAPN3-213ENST00000565173 FBXO17Q96EF6 278 aa7.47□□□□□ -1.21
CAPN3-213ENST00000565173 MAELQ96JY0 434 aaKnown RBP7.47□□□□□ -1.21
CAPN3-213ENST00000565173 SLC38A2Q96QD8 506 aa7.47□□□□□ -1.21
CAPN3-213ENST00000565173 PTDSS2Q9BVG9 487 aa7.47□□□□□ -1.21
CAPN3-213ENST00000565173 PRR14Q9BWN1 585 aa7.47□□□□□ -1.21
CAPN3-213ENST00000565173 NELFAQ9H3P2 528 aa7.47□□□□□ -1.21
CAPN3-213ENST00000565173 KCNK9Q9NPC2 374 aa7.47□□□□□ -1.21
CAPN3-213ENST00000565173 OBP2BQ9NPH6 170 aa7.47□□□□□ -1.21
CAPN3-213ENST00000565173 THAP1Q9NVV9 213 aa7.47□□□□□ -1.21
CAPN3-213ENST00000565173 TMEM45AQ9NWC5 275 aa7.47□□□□□ -1.21
CAPN3-213ENST00000565173 P2RX2Q9UBL9 471 aa7.47□□□□□ -1.21
CAPN3-213ENST00000565173 ZNF443Q9Y2A4 671 aaPredicted RBP7.47□□□□□ -1.21
CAPN3-213ENST00000565173 NBEAL1Q6ZS30 2694 aa7.47□□□□□ -1.21
CAPN3-213ENST00000565173 ARPC4-TTLL3A0A0A6YYG9 625 aa7.46□□□□□ -1.22
CAPN3-213ENST00000565173 A0A0G2JPF8 293 aa7.46□□□□□ -1.22
CAPN3-213ENST00000565173 SLC35F4A4IF30 521 aa7.46□□□□□ -1.22
CAPN3-213ENST00000565173 HNRNPCL2B2RXH8 293 aa7.46□□□□□ -1.22
CAPN3-213ENST00000565173 HNRNPCL3B7ZW38 293 aa7.46□□□□□ -1.22
CAPN3-213ENST00000565173 FRS3O43559 492 aa7.46□□□□□ -1.22
CAPN3-213ENST00000565173 LMX1BO60663 402 aa7.46□□□□□ -1.22
CAPN3-213ENST00000565173 HNRNPCL1O60812 293 aaKnown RBP7.46□□□□□ -1.22
CAPN3-213ENST00000565173 SLC22A3O75751 556 aa7.46□□□□□ -1.22
CAPN3-213ENST00000565173 ZNF432O94892 652 aa7.46□□□□□ -1.22
CAPN3-213ENST00000565173 VAMP5O95183 116 aa7.46□□□□□ -1.22
CAPN3-213ENST00000565173 IGLV1-44P01699 117 aa7.46□□□□□ -1.22
CAPN3-213ENST00000565173 BCHEP06276 602 aa7.46□□□□□ -1.22
CAPN3-213ENST00000565173 OR4A8P0C604 315 aa7.46□□□□□ -1.22
CAPN3-213ENST00000565173 HNRNPCL4P0DMR1 293 aa7.46□□□□□ -1.22
CAPN3-213ENST00000565173 H2AFXP16104 143 aaPredicted RBP7.46□□□□□ -1.22
CAPN3-213ENST00000565173 ZNF16P17020 682 aaPredicted RBP7.46□□□□□ -1.22
CAPN3-213ENST00000565173 CALCRP30988 508 aa7.46□□□□□ -1.22
CAPN3-213ENST00000565173 THBS2P35442 1172 aa7.46□□□□□ -1.22
CAPN3-213ENST00000565173 SERPINF1P36955 418 aa7.46□□□□□ -1.22
CAPN3-213ENST00000565173 CRATP43155 626 aa7.46□□□□□ -1.22
CAPN3-213ENST00000565173 CRISP3P54108 245 aa7.46□□□□□ -1.22
CAPN3-213ENST00000565173 HGFACQ04756 655 aa7.46□□□□□ -1.22
CAPN3-213ENST00000565173 ADIPOQQ15848 244 aa7.46□□□□□ -1.22
CAPN3-213ENST00000565173 ZSWIM7Q19AV6 140 aa7.46□□□□□ -1.22
CAPN3-213ENST00000565173 C3orf36Q3SXR2 165 aa7.46□□□□□ -1.22
CAPN3-213ENST00000565173 TBRG1Q3YBR2 411 aa7.46□□□□□ -1.22
CAPN3-213ENST00000565173 SLC9B1Q4ZJI4 515 aa7.46□□□□□ -1.22
CAPN3-213ENST00000565173 PDCD4Q53EL6 469 aaKnown RBP7.46□□□□□ -1.22
CAPN3-213ENST00000565173 RPS26P11Q5JNZ5 115 aaPredicted RBP7.46□□□□□ -1.22
CAPN3-213ENST00000565173 KDM8Q8N371 416 aa7.46□□□□□ -1.22
CAPN3-213ENST00000565173 CADM2Q8N3J6 435 aa7.46□□□□□ -1.22
CAPN3-213ENST00000565173 FAM169BQ8N8A8 192 aa7.46□□□□□ -1.22
CAPN3-213ENST00000565173 MFSD8Q8NHS3 518 aa7.46□□□□□ -1.22
CAPN3-213ENST00000565173 STK35Q8TDR2 534 aa7.46□□□□□ -1.22
CAPN3-213ENST00000565173 MSI2Q96DH6 328 aaKnown RBP7.46□□□□□ -1.22
CAPN3-213ENST00000565173 FOXN4Q96NZ1 517 aa7.46□□□□□ -1.22
CAPN3-213ENST00000565173 ZNF317Q96PQ6 595 aaPredicted RBP7.46□□□□□ -1.22
CAPN3-213ENST00000565173 ALKBH3Q96Q83 286 aaPredicted RBP7.46□□□□□ -1.22
CAPN3-213ENST00000565173 ZBTB18Q99592 522 aa7.46□□□□□ -1.22
CAPN3-213ENST00000565173 PAIP2Q9BPZ3 127 aaKnown RBP7.46□□□□□ -1.22
CAPN3-213ENST00000565173 KATNB1Q9BVA0 655 aa7.46□□□□□ -1.22
CAPN3-213ENST00000565173 SPATA9Q9BWV2 254 aa7.46□□□□□ -1.22
CAPN3-213ENST00000565173 TAPBPLQ9BX59 468 aa7.46□□□□□ -1.22
CAPN3-213ENST00000565173 BEX2Q9BXY8 128 aa7.46□□□□□ -1.22
CAPN3-213ENST00000565173 LINC00470Q9BZP3 86 aa7.46□□□□□ -1.22
CAPN3-213ENST00000565173 SEC61A2Q9H9S3 476 aa7.46□□□□□ -1.22
CAPN3-213ENST00000565173 TPT1P8Q9HAU6 139 aa7.46□□□□□ -1.22
CAPN3-213ENST00000565173 SDR39U1Q9NRG7 319 aaPredicted RBP7.46□□□□□ -1.22
CAPN3-213ENST00000565173 CA10Q9NS85 328 aa7.46□□□□□ -1.22
CAPN3-213ENST00000565173 ADPRHL2Q9NX46 363 aa7.46□□□□□ -1.22
CAPN3-213ENST00000565173 CALML5Q9NZT1 146 aa7.46□□□□□ -1.22
CAPN3-213ENST00000565173 B3GAT1Q9P2W7 334 aa7.46□□□□□ -1.22
CAPN3-213ENST00000565173 SEC14L4Q9UDX3 406 aa7.46□□□□□ -1.22
CAPN3-213ENST00000565173 RASD1Q9Y272 281 aa7.46□□□□□ -1.22
CAPN3-213ENST00000565173 MALRD1Q5VYJ5 2156 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 A0A096LPE4 126 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 A0A096LPI6 279 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 IGHV4-61A0A0C4DH41 118 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 A0A1W2PPZ6 126 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 LOC390937A0A1W2PQ73 354 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 TMEM129A0AVI4 362 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 TRPC5OSA6NMA1 111 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 B9A039 149 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 ZNF587BE7ETH6 402 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 RPL36A-HNRNPH2H7BZ11 118 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 NDUFS8O00217 210 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 IGKV3-15P01624 115 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 CRYAAP02489 173 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 IGFBP1P08833 259 aaPredicted RBP7.45□□□□□ -1.22
CAPN3-213ENST00000565173 NUDT7P0C024 238 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 CECR9P0C854 216 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 KITP10721 976 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 PNMTP11086 282 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 BMP2P12643 396 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 IDO1P14902 403 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 HOXB9P17482 250 aaPredicted RBP7.45□□□□□ -1.22
CAPN3-213ENST00000565173 PAX7P23759 505 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 IGFBP5P24593 272 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 GZMKP49863 264 aa7.45□□□□□ -1.22
CAPN3-213ENST00000565173 PDLIM4P50479 330 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms