RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 ZNF433Q8N7K0 673 aaPredicted RBP12.03□□□□□ -0.48
VPS9D1-204ENST00000565023 BHLHE22Q8NFJ8 381 aaPredicted RBP12.03□□□□□ -0.48
VPS9D1-204ENST00000565023 OR52N5Q8NH56 324 aa12.03□□□□□ -0.48
VPS9D1-204ENST00000565023 HSD17B8Q92506 261 aa12.03□□□□□ -0.48
VPS9D1-204ENST00000565023 NEUROG1Q92886 237 aa12.03□□□□□ -0.48
VPS9D1-204ENST00000565023 ESRP2Q9H6T0 727 aaKnown RBP12.03□□□□□ -0.48
VPS9D1-204ENST00000565023 NGBQ9NPG2 151 aa12.03□□□□□ -0.48
VPS9D1-204ENST00000565023 UPB1Q9UBR1 384 aa12.03□□□□□ -0.48
VPS9D1-204ENST00000565023 RNF115Q9Y4L5 304 aa12.03□□□□□ -0.48
VPS9D1-204ENST00000565023 ELOA3DA6NLF2 546 aaPredicted RBP12.02□□□□□ -0.49
VPS9D1-204ENST00000565023 A8MVM7 634 aa12.02□□□□□ -0.49
VPS9D1-204ENST00000565023 FAM220BPB1ANY3 271 aa12.02□□□□□ -0.49
VPS9D1-204ENST00000565023 AHSA1O95433 338 aa12.02□□□□□ -0.49
VPS9D1-204ENST00000565023 OPN1SWP03999 348 aa12.02□□□□□ -0.49
VPS9D1-204ENST00000565023 CDH2P19022 906 aaPredicted RBP12.02□□□□□ -0.49
VPS9D1-204ENST00000565023 CBLP22681 906 aa12.02□□□□□ -0.49
VPS9D1-204ENST00000565023 RPS5P46782 204 aaKnown RBP12.02□□□□□ -0.49
VPS9D1-204ENST00000565023 SLC16A1P53985 500 aa12.02□□□□□ -0.49
VPS9D1-204ENST00000565023 NCALDP61601 193 aa12.02□□□□□ -0.49
VPS9D1-204ENST00000565023 H3F3AP84243 136 aa12.02□□□□□ -0.49
VPS9D1-204ENST00000565023 BSPH1Q075Z2 132 aa12.02□□□□□ -0.49
VPS9D1-204ENST00000565023 KRT72Q14CN4 511 aa12.02□□□□□ -0.49
VPS9D1-204ENST00000565023 ELOA3BQ3SY89 546 aa12.02□□□□□ -0.49
VPS9D1-204ENST00000565023 NCMAPQ5T1S8 102 aa12.02□□□□□ -0.49
VPS9D1-204ENST00000565023 C1orf140Q5VVS0 124 aa12.02□□□□□ -0.49
VPS9D1-204ENST00000565023 TMEM225Q6GV28 225 aa12.02□□□□□ -0.49
VPS9D1-204ENST00000565023 ADAM5Q6NVV9 412 aa12.02□□□□□ -0.49
VPS9D1-204ENST00000565023 PAQR6Q6TCH4 344 aa12.02□□□□□ -0.49
VPS9D1-204ENST00000565023 C20orf204Q6ZNR8 217 aa12.02□□□□□ -0.49
VPS9D1-204ENST00000565023 KBTBD8Q8NFY9 601 aa12.02□□□□□ -0.49
VPS9D1-204ENST00000565023 ELOA3Q8NG57 546 aa12.02□□□□□ -0.49
VPS9D1-204ENST00000565023 TMEM171Q8WVE6 324 aa12.02□□□□□ -0.49
VPS9D1-204ENST00000565023 MUCL1Q96DR8 90 aa12.02□□□□□ -0.49
VPS9D1-204ENST00000565023 C1QTNF6Q9BXI9 259 aa12.02□□□□□ -0.49
VPS9D1-204ENST00000565023 GSX1Q9H4S2 264 aaPredicted RBP12.02□□□□□ -0.49
VPS9D1-204ENST00000565023 ARL8BQ9NVJ2 186 aa12.02□□□□□ -0.49
VPS9D1-204ENST00000565023 ASB6Q9NWX5 421 aa12.02□□□□□ -0.49
VPS9D1-204ENST00000565023 ABCD2Q9UBJ2 740 aa12.02□□□□□ -0.49
VPS9D1-204ENST00000565023 TAGLN3Q9UI15 199 aa12.02□□□□□ -0.49
VPS9D1-204ENST00000565023 SLC13A4Q9UKG4 626 aa12.02□□□□□ -0.49
VPS9D1-204ENST00000565023 USP22Q9UPT9 525 aa12.02□□□□□ -0.49
VPS9D1-204ENST00000565023 SLC9A8Q9Y2E8 581 aa12.02□□□□□ -0.49
VPS9D1-204ENST00000565023 FLVCR1Q9Y5Y0 555 aa12.02□□□□□ -0.49
VPS9D1-204ENST00000565023 HEATR1Q9H583 2144 aaKnown RBP12.02□□□□□ -0.49
VPS9D1-204ENST00000565023 CADP27708 2225 aa12.02□□□□□ -0.49
VPS9D1-204ENST00000565023 ZNF469Q96JG9 3925 aaPredicted RBP12.01□□□□□ -0.49
VPS9D1-204ENST00000565023 USF3Q68DE3 2245 aa12.01□□□□□ -0.49
VPS9D1-204ENST00000565023 DPRXA6NFQ7 191 aa12.01□□□□□ -0.49
VPS9D1-204ENST00000565023 NME4O00746 187 aa12.01□□□□□ -0.49
VPS9D1-204ENST00000565023 NDUFAB1O14561 156 aa12.01□□□□□ -0.49
VPS9D1-204ENST00000565023 HS3ST1O14792 307 aa12.01□□□□□ -0.49
VPS9D1-204ENST00000565023 ARHGEF9O43307 516 aa12.01□□□□□ -0.49
VPS9D1-204ENST00000565023 COX5AP20674 150 aa12.01□□□□□ -0.49
VPS9D1-204ENST00000565023 HTR2AP28223 471 aa12.01□□□□□ -0.49
VPS9D1-204ENST00000565023 GTF2E2P29084 291 aaKnown RBP12.01□□□□□ -0.49
VPS9D1-204ENST00000565023 HOXC12P31275 282 aa12.01□□□□□ -0.49
VPS9D1-204ENST00000565023 ZNF83P51522 516 aa12.01□□□□□ -0.49
VPS9D1-204ENST00000565023 SLC7A2P52569 658 aa12.01□□□□□ -0.49
VPS9D1-204ENST00000565023 CRYBA2P53672 197 aa12.01□□□□□ -0.49
VPS9D1-204ENST00000565023 RGS8P57771 180 aaPredicted RBP12.01□□□□□ -0.49
VPS9D1-204ENST00000565023 PSME3P61289 254 aa12.01□□□□□ -0.49
VPS9D1-204ENST00000565023 IL1RL1Q01638 556 aa12.01□□□□□ -0.49
VPS9D1-204ENST00000565023 LIPEQ05469 1076 aa12.01□□□□□ -0.49
VPS9D1-204ENST00000565023 SLC17A1Q14916 467 aa12.01□□□□□ -0.49
VPS9D1-204ENST00000565023 DUSP7Q16829 419 aa12.01□□□□□ -0.49
VPS9D1-204ENST00000565023 TSPO2Q5TGU0 170 aa12.01□□□□□ -0.49
VPS9D1-204ENST00000565023 AAED1Q7RTV5 226 aa12.01□□□□□ -0.49
VPS9D1-204ENST00000565023 KRTAP1-3Q8IUG1 177 aa12.01□□□□□ -0.49
VPS9D1-204ENST00000565023 KDM8Q8N371 416 aa12.01□□□□□ -0.49
VPS9D1-204ENST00000565023 SMYD1Q8NB12 490 aa12.01□□□□□ -0.49
VPS9D1-204ENST00000565023 OR2T12Q8NG77 320 aa12.01□□□□□ -0.49
VPS9D1-204ENST00000565023 GPR32P1Q8NGA4 272 aa12.01□□□□□ -0.49
VPS9D1-204ENST00000565023 OR9K2Q8NGE7 335 aa12.01□□□□□ -0.49
VPS9D1-204ENST00000565023 TAMM41Q96BW9 452 aa12.01□□□□□ -0.49
VPS9D1-204ENST00000565023 ZNF385AQ96PM9 386 aaKnown RBP12.01□□□□□ -0.49
VPS9D1-204ENST00000565023 EVA1AQ9H8M9 152 aa12.01□□□□□ -0.49
VPS9D1-204ENST00000565023 SLC7A10Q9NS82 523 aa12.01□□□□□ -0.49
VPS9D1-204ENST00000565023 NPAP1Q9NZP6 1156 aa12.01□□□□□ -0.49
VPS9D1-204ENST00000565023 LAMP3Q9UQV4 416 aa12.01□□□□□ -0.49
VPS9D1-204ENST00000565023 A0A1B0GWA3 101 aa12□□□□□ -0.49
VPS9D1-204ENST00000565023 ELOVL7A1L3X0 281 aa12□□□□□ -0.49
VPS9D1-204ENST00000565023 OR5H1A6NKK0 313 aa12□□□□□ -0.49
VPS9D1-204ENST00000565023 AQP7P3A6NL99 342 aa12□□□□□ -0.49
VPS9D1-204ENST00000565023 TMEM229AB2RXF0 380 aa12□□□□□ -0.49
VPS9D1-204ENST00000565023 KRT33AO76009 404 aa12□□□□□ -0.49
VPS9D1-204ENST00000565023 LGI1O95970 557 aa12□□□□□ -0.49
VPS9D1-204ENST00000565023 C8BP07358 591 aa12□□□□□ -0.49
VPS9D1-204ENST00000565023 CD247P20963 164 aa12□□□□□ -0.49
VPS9D1-204ENST00000565023 MAP2K6P52564 334 aa12□□□□□ -0.49
VPS9D1-204ENST00000565023 TIMM23BQ5SRD1 257 aa12□□□□□ -0.49
VPS9D1-204ENST00000565023 SHEQ5VZ18 495 aa12□□□□□ -0.49
VPS9D1-204ENST00000565023 Q71RC1 249 aaPredicted RBP12□□□□□ -0.49
VPS9D1-204ENST00000565023 YTHDF3Q7Z739 585 aaKnown RBP12□□□□□ -0.49
VPS9D1-204ENST00000565023 MICU2Q8IYU8 434 aa12□□□□□ -0.49
VPS9D1-204ENST00000565023 PIAS4Q8N2W9 510 aaPredicted RBP12□□□□□ -0.49
VPS9D1-204ENST00000565023 LSMEM1Q8N8F7 131 aa12□□□□□ -0.49
VPS9D1-204ENST00000565023 BCAS4Q8TDM0 211 aa12□□□□□ -0.49
VPS9D1-204ENST00000565023 KTI12Q96EK9 354 aaPredicted RBP12□□□□□ -0.49
VPS9D1-204ENST00000565023 Q96MF0 132 aa12□□□□□ -0.49
VPS9D1-204ENST00000565023 WFDC6Q9BQY6 131 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms