RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 SLC47A1Q96FL8 570 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 HYLS1Q96M11 299 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 GINS3Q9BRX5 216 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 TWSG1Q9GZX9 223 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 TMEM231Q9H6L2 316 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 CRLF2Q9HC73 371 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 ADAP2Q9NPF8 381 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 GLRX2Q9NS18 164 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 KCNIP1Q9NZI2 227 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 PDP1Q9P0J1 537 aaPredicted RBP3.11□□□□□ -1.91
CHD9-213ENST00000564845 POLDIP2Q9Y2S7 368 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 DOCK4Q8N1I0 1966 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 IGKV1-8A0A0C4DH67 115 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 TCRBV16S1A1N1A0A5B0 115 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 CPSF4LA6NMK7 179 aaKnown RBP3.11□□□□□ -1.91
CHD9-213ENST00000564845 A8MXE2 369 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 ANHXE9PGG2 379 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 FCMRO60667 390 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 CD5P06127 495 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 SSTR4P31391 388 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 MDH2P40926 338 aaKnown RBP3.11□□□□□ -1.91
CHD9-213ENST00000564845 LCN6P62502 163 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 EMX2Q04743 252 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 C17orf47Q8NEP4 570 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 NDNFQ8TB73 568 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 GGHQ92820 318 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 SLC38A3Q99624 504 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 ZBTB20Q9HC78 741 aaPredicted RBP3.11□□□□□ -1.91
CHD9-213ENST00000564845 CNIH4Q9P003 139 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 TESQ9UGI8 421 aaKnown RBP3.11□□□□□ -1.91
CHD9-213ENST00000564845 FOXD3Q9UJU5 478 aaPredicted RBP3.11□□□□□ -1.91
CHD9-213ENST00000564845 COLQQ9Y215 455 aaPredicted RBP3.11□□□□□ -1.91
CHD9-213ENST00000564845 RBM7Q9Y580 266 aaKnown RBP3.11□□□□□ -1.91
CHD9-213ENST00000564845 SSNA1O43805 119 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 CLEC2LP0C7M8 214 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 CBR1P16152 277 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 RBMS1P29558 406 aaKnown RBP3.11□□□□□ -1.91
CHD9-213ENST00000564845 RGS6P49758 472 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 TAP2Q03519 686 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 DUSP6Q16828 381 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 LINC01559Q495D7 138 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 TRMT12Q53H54 448 aaKnown RBP3.11□□□□□ -1.91
CHD9-213ENST00000564845 ZNF805Q5CZA5 627 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 SPATC1Q76KD6 591 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 GIPC3Q8TF64 312 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 CIB3Q96Q77 187 aaPredicted RBP3.11□□□□□ -1.91
CHD9-213ENST00000564845 FAM60AQ9NP50 221 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 CNOT2Q9NZN8 540 aaKnown RBP3.11□□□□□ -1.91
CHD9-213ENST00000564845 FLRT3Q9NZU0 649 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 FBXL4Q9UKA2 621 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 G3V3Y1 287 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 K7EPI3 171 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 SEMA7AO75326 666 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 NCR1O76036 304 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 C1orf105O95561 183 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 DIRAS3O95661 229 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 IFNA2P01563 188 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 HLA-HP01893 362 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 C1GALT1C1LP0DN25 315 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 PEBP1P30086 187 aaKnown RBP3.1□□□□□ -1.91
CHD9-213ENST00000564845 LTBRP36941 435 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 SLX4IPQ5VYV7 408 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 ZNF730Q6ZMV8 503 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 ZAR1Q86SH2 424 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 SERPINA11Q86U17 422 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 FAM219AQ8IW50 185 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 TRAM1L1Q8N609 369 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 HSD17B11Q8NBQ5 300 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 ANKK1Q8NFD2 765 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 OR5P2Q8WZ92 322 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 S100PBPQ96BU1 408 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 ZFP3Q96NJ6 502 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 OR1F2PQ96R84 312 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 CCDC163A0A0D9SF12 145 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 KLRC4-KLRK1H3BQV0 150 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 BHLHE40O14503 412 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 VILLO15195 856 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 ZNF354AO60765 605 aaPredicted RBP3.1□□□□□ -1.91
CHD9-213ENST00000564845 HBE1P02100 147 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 TFAP2AP05549 437 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 TPOP07202 933 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 AKIRIN2Q53H80 203 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 HENMT1Q5T8I9 393 aaKnown RBP3.1□□□□□ -1.91
CHD9-213ENST00000564845 NOXRED1Q6NXP6 359 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 BLOC1S3Q6QNY0 202 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 ADGRF3Q8IZF5 1079 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 MTURNQ8N3F0 131 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 OR52E1Q8NGJ3 308 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 CSF3RQ99062 836 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 OBP2BQ9NPH6 170 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 TMEM181Q9P2C4 612 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 NLKQ9UBE8 527 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 DTX4Q9Y2E6 619 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 LOC100506127A0A0U1RQW1 187 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 PLPP1O14494 284 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 AP1G1O43747 822 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 TMPRSS11DO60235 418 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 BRINP1O60477 761 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 FCARP24071 287 aa3.1□□□□□ -1.91
CHD9-213ENST00000564845 HSD11B1P28845 292 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms