RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 ASB9Q96DX5 294 aa14.22□□□□□ -0.13
RAB40C-208ENST00000564703 ZNF300Q96RE9 604 aaPredicted RBP14.22□□□□□ -0.13
RAB40C-208ENST00000564703 PTDSS2Q9BVG9 487 aa14.22□□□□□ -0.13
RAB40C-208ENST00000564703 TRIM15Q9C019 465 aa14.22□□□□□ -0.13
RAB40C-208ENST00000564703 RHCGQ9UBD6 479 aa14.22□□□□□ -0.13
RAB40C-208ENST00000564703 A4GNTQ9UNA3 340 aa14.22□□□□□ -0.13
RAB40C-208ENST00000564703 USP9YO00507 2555 aaPredicted RBP14.22□□□□□ -0.13
RAB40C-208ENST00000564703 IGKV3D-15A0A087WSY6 115 aa14.21□□□□□ -0.13
RAB40C-208ENST00000564703 HTR3EA5X5Y0 456 aa14.21□□□□□ -0.13
RAB40C-208ENST00000564703 FTCDNL1E5RQL4 147 aa14.21□□□□□ -0.13
RAB40C-208ENST00000564703 EBAG9O00559 213 aa14.21□□□□□ -0.13
RAB40C-208ENST00000564703 KPNA4O00629 521 aaPredicted RBP14.21□□□□□ -0.13
RAB40C-208ENST00000564703 LYPD3O95274 346 aa14.21□□□□□ -0.13
RAB40C-208ENST00000564703 CH25HO95992 272 aa14.21□□□□□ -0.13
RAB40C-208ENST00000564703 CGAP01215 116 aa14.21□□□□□ -0.13
RAB40C-208ENST00000564703 MT-ND1P03886 318 aa14.21□□□□□ -0.13
RAB40C-208ENST00000564703 UMPSP11172 480 aa14.21□□□□□ -0.13
RAB40C-208ENST00000564703 POU2F1P14859 743 aa14.21□□□□□ -0.13
RAB40C-208ENST00000564703 ZNF43P17038 809 aa14.21□□□□□ -0.13
RAB40C-208ENST00000564703 RHCEP18577 417 aa14.21□□□□□ -0.13
RAB40C-208ENST00000564703 KLK2P20151 261 aa14.21□□□□□ -0.13
RAB40C-208ENST00000564703 PTNP21246 168 aa14.21□□□□□ -0.13
RAB40C-208ENST00000564703 GRPRP30550 384 aa14.21□□□□□ -0.13
RAB40C-208ENST00000564703 SLC16A1P53985 500 aa14.21□□□□□ -0.13
RAB40C-208ENST00000564703 SMIM11AP58511 58 aa14.21□□□□□ -0.13
RAB40C-208ENST00000564703 TFF3Q07654 80 aa14.21□□□□□ -0.13
RAB40C-208ENST00000564703 C1DQ13901 141 aaKnown RBP14.21□□□□□ -0.13
RAB40C-208ENST00000564703 SLC17A1Q14916 467 aa14.21□□□□□ -0.13
RAB40C-208ENST00000564703 EXOC3L2Q2M3D2 409 aa14.21□□□□□ -0.13
RAB40C-208ENST00000564703 MEX3BQ6ZN04 569 aaKnown RBP14.21□□□□□ -0.13
RAB40C-208ENST00000564703 CCDC121Q6ZUS5 278 aa14.21□□□□□ -0.13
RAB40C-208ENST00000564703 NUFIP2Q7Z417 695 aaKnown RBP14.21□□□□□ -0.13
RAB40C-208ENST00000564703 TSPYL5Q86VY4 417 aaPredicted RBP14.21□□□□□ -0.13
RAB40C-208ENST00000564703 NKAIN4Q8IVV8 208 aa14.21□□□□□ -0.13
RAB40C-208ENST00000564703 CLPTM1LQ96KA5 538 aa14.21□□□□□ -0.13
RAB40C-208ENST00000564703 OXGR1Q96P68 337 aa14.21□□□□□ -0.13
RAB40C-208ENST00000564703 PRSS27Q9BQR3 290 aa14.21□□□□□ -0.13
RAB40C-208ENST00000564703 NANSQ9NR45 359 aa14.21□□□□□ -0.13
RAB40C-208ENST00000564703 HCFC1P51610 2035 aa14.2□□□□□ -0.14
RAB40C-208ENST00000564703 ZNF716A6NP11 495 aa14.2□□□□□ -0.14
RAB40C-208ENST00000564703 ZNF814B7Z6K7 855 aa14.2□□□□□ -0.14
RAB40C-208ENST00000564703 C19orf84I3L1E1 186 aa14.2□□□□□ -0.14
RAB40C-208ENST00000564703 J3KTA2 159 aa14.2□□□□□ -0.14
RAB40C-208ENST00000564703 hCG_2039718K7EN88 272 aa14.2□□□□□ -0.14
RAB40C-208ENST00000564703 M0R082 166 aa14.2□□□□□ -0.14
RAB40C-208ENST00000564703 GSC2O15499 205 aa14.2□□□□□ -0.14
RAB40C-208ENST00000564703 BGLAPP02818 100 aa14.2□□□□□ -0.14
RAB40C-208ENST00000564703 FABP3P05413 133 aa14.2□□□□□ -0.14
RAB40C-208ENST00000564703 CD79BP40259 229 aa14.2□□□□□ -0.14
RAB40C-208ENST00000564703 MS4A2Q01362 244 aa14.2□□□□□ -0.14
RAB40C-208ENST00000564703 CHRNB3Q05901 458 aa14.2□□□□□ -0.14
RAB40C-208ENST00000564703 WDR88Q6ZMY6 472 aa14.2□□□□□ -0.14
RAB40C-208ENST00000564703 RNF113BQ8IZP6 322 aaKnown RBP14.2□□□□□ -0.14
RAB40C-208ENST00000564703 OFCC1Q8IZS5 231 aa14.2□□□□□ -0.14
RAB40C-208ENST00000564703 UBE2J2Q8N2K1 259 aa14.2□□□□□ -0.14
RAB40C-208ENST00000564703 SCAIQ8N9R8 606 aa14.2□□□□□ -0.14
RAB40C-208ENST00000564703 ZNF417Q8TAU3 575 aa14.2□□□□□ -0.14
RAB40C-208ENST00000564703 TMEM255BQ8WV15 326 aa14.2□□□□□ -0.14
RAB40C-208ENST00000564703 APH1AQ96BI3 265 aa14.2□□□□□ -0.14
RAB40C-208ENST00000564703 ZNF587Q96SQ5 575 aaPredicted RBP14.2□□□□□ -0.14
RAB40C-208ENST00000564703 SEPHS2Q99611 448 aa14.2□□□□□ -0.14
RAB40C-208ENST00000564703 SPOCK3Q9BQ16 436 aa14.2□□□□□ -0.14
RAB40C-208ENST00000564703 ZNF426Q9BUY5 554 aa14.2□□□□□ -0.14
RAB40C-208ENST00000564703 MMADHCQ9H3L0 296 aaPredicted RBP14.2□□□□□ -0.14
RAB40C-208ENST00000564703 GALNT8Q9NY28 637 aa14.2□□□□□ -0.14
RAB40C-208ENST00000564703 NDRG3Q9UGV2 375 aa14.2□□□□□ -0.14
RAB40C-208ENST00000564703 ING1Q9UK53 422 aaPredicted RBP14.2□□□□□ -0.14
RAB40C-208ENST00000564703 C16orf97H3BN30 126 aa14.19□□□□□ -0.14
RAB40C-208ENST00000564703 HNRNPRO43390 633 aaKnown RBP14.19□□□□□ -0.14
RAB40C-208ENST00000564703 RAMP1O60894 148 aa14.19□□□□□ -0.14
RAB40C-208ENST00000564703 H1F0P07305 194 aaKnown RBP14.19□□□□□ -0.14
RAB40C-208ENST00000564703 FUT1P19526 365 aa14.19□□□□□ -0.14
RAB40C-208ENST00000564703 AHCYP23526 432 aa14.19□□□□□ -0.14
RAB40C-208ENST00000564703 FAM98BQ52LJ0 330 aaKnown RBP14.19□□□□□ -0.14
RAB40C-208ENST00000564703 LCN8Q6JVE9 175 aa14.19□□□□□ -0.14
RAB40C-208ENST00000564703 ZNF474Q6S9Z5 364 aaPredicted RBP14.19□□□□□ -0.14
RAB40C-208ENST00000564703 ZNF730Q6ZMV8 503 aa14.19□□□□□ -0.14
RAB40C-208ENST00000564703 AAED1Q7RTV5 226 aa14.19□□□□□ -0.14
RAB40C-208ENST00000564703 ZDHHC21Q8IVQ6 265 aa14.19□□□□□ -0.14
RAB40C-208ENST00000564703 KDM8Q8N371 416 aa14.19□□□□□ -0.14
RAB40C-208ENST00000564703 FAM86B1Q8N7N1 296 aa14.19□□□□□ -0.14
RAB40C-208ENST00000564703 OR9K2Q8NGE7 335 aa14.19□□□□□ -0.14
RAB40C-208ENST00000564703 OR5J2Q8NH18 312 aa14.19□□□□□ -0.14
RAB40C-208ENST00000564703 SGTBQ96EQ0 304 aa14.19□□□□□ -0.14
RAB40C-208ENST00000564703 C7orf34Q96L11 122 aa14.19□□□□□ -0.14
RAB40C-208ENST00000564703 MOGAT1Q96PD6 335 aa14.19□□□□□ -0.14
RAB40C-208ENST00000564703 ZNF347Q96SE7 839 aa14.19□□□□□ -0.14
RAB40C-208ENST00000564703 PIP5K1AQ99755 562 aa14.19□□□□□ -0.14
RAB40C-208ENST00000564703 ENKD1Q9H0I2 346 aa14.19□□□□□ -0.14
RAB40C-208ENST00000564703 ANKRD19PQ9H560 264 aa14.19□□□□□ -0.14
RAB40C-208ENST00000564703 FKRPQ9H9S5 495 aa14.19□□□□□ -0.14
RAB40C-208ENST00000564703 NMNAT1Q9HAN9 279 aaPredicted RBP14.19□□□□□ -0.14
RAB40C-208ENST00000564703 IL1RAPQ9NPH3 570 aa14.19□□□□□ -0.14
RAB40C-208ENST00000564703 NPDC1Q9NQX5 325 aaPredicted RBP14.19□□□□□ -0.14
RAB40C-208ENST00000564703 MRPL39Q9NYK5 338 aaKnown RBP14.19□□□□□ -0.14
RAB40C-208ENST00000564703 NDUFAF4Q9P032 175 aa14.19□□□□□ -0.14
RAB40C-208ENST00000564703 FLVCR1Q9Y5Y0 555 aa14.19□□□□□ -0.14
RAB40C-208ENST00000564703 TUBAL3A6NHL2 446 aa14.18□□□□□ -0.14
RAB40C-208ENST00000564703 FFAR1O14842 300 aa14.18□□□□□ -0.14
RAB40C-208ENST00000564703 KRT33AO76009 404 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms