RNA–Protein interactions for RNA: ENST00000564390.1

AC009041.3-201, humanhuman

TSL 5 BASIC

Gene AC009041.3, Length 879 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.3-201ENST00000564390 CDH11P55287 796 aa22.21■■□□□ 1.15
AC009041.3-201ENST00000564390 RPS4XP62701 263 aaKnown RBP22.21■■□□□ 1.15
AC009041.3-201ENST00000564390 SLC25A3Q00325 362 aa22.21■■□□□ 1.15
AC009041.3-201ENST00000564390 CGB2Q6NT52 195 aa22.21■■□□□ 1.15
AC009041.3-201ENST00000564390 CIARTQ8N365 385 aaPredicted RBP22.21■■□□□ 1.15
AC009041.3-201ENST00000564390 LSMEM1Q8N8F7 131 aa22.21■■□□□ 1.15
AC009041.3-201ENST00000564390 ZNF701Q9NV72 531 aaPredicted RBP22.21■■□□□ 1.15
AC009041.3-201ENST00000564390 MAGED1Q9Y5V3 778 aaPredicted RBP22.21■■□□□ 1.15
AC009041.3-201ENST00000564390 TRIM64A6NGJ6 449 aa22.2■■□□□ 1.14
AC009041.3-201ENST00000564390 TRIM64BA6NI03 449 aa22.2■■□□□ 1.14
AC009041.3-201ENST00000564390 H7C1Q1 480 aa22.2■■□□□ 1.14
AC009041.3-201ENST00000564390 M0R3H8 397 aa22.2■■□□□ 1.14
AC009041.3-201ENST00000564390 FBP2O00757 339 aa22.2■■□□□ 1.14
AC009041.3-201ENST00000564390 SERPINB7O75635 380 aa22.2■■□□□ 1.14
AC009041.3-201ENST00000564390 MFN2O95140 757 aa22.2■■□□□ 1.14
AC009041.3-201ENST00000564390 INHBBP09529 407 aa22.2■■□□□ 1.14
AC009041.3-201ENST00000564390 TROVE2P10155 538 aaKnown RBP eCLIP22.2■■□□□ 1.14
AC009041.3-201ENST00000564390 CBLP22681 906 aa22.2■■□□□ 1.14
AC009041.3-201ENST00000564390 SELENOPP49908 381 aa22.2■■□□□ 1.14
AC009041.3-201ENST00000564390 PCBP3P57721 371 aaKnown RBP22.2■■□□□ 1.14
AC009041.3-201ENST00000564390 OR7E24Q6IFN5 339 aa22.2■■□□□ 1.14
AC009041.3-201ENST00000564390 CREB3L2Q70SY1 520 aa22.2■■□□□ 1.14
AC009041.3-201ENST00000564390 Q71RC1 249 aaPredicted RBP22.2■■□□□ 1.14
AC009041.3-201ENST00000564390 PIAS4Q8N2W9 510 aaPredicted RBP22.2■■□□□ 1.14
AC009041.3-201ENST00000564390 WDR31Q8NA23 367 aa22.2■■□□□ 1.14
AC009041.3-201ENST00000564390 SMAP2Q8WU79 429 aaPredicted RBP22.2■■□□□ 1.14
AC009041.3-201ENST00000564390 TAAR8Q969N4 342 aa22.2■■□□□ 1.14
AC009041.3-201ENST00000564390 MUS81Q96NY9 551 aa22.2■■□□□ 1.14
AC009041.3-201ENST00000564390 ALKBH3Q96Q83 286 aaPredicted RBP22.2■■□□□ 1.14
AC009041.3-201ENST00000564390 AMBRA1Q9C0C7 1298 aa22.2■■□□□ 1.14
AC009041.3-201ENST00000564390 C12orf10Q9HB07 376 aa22.2■■□□□ 1.14
AC009041.3-201ENST00000564390 RASD1Q9Y272 281 aa22.2■■□□□ 1.14
AC009041.3-201ENST00000564390 M0R1B8 84 aa22.19■■□□□ 1.14
AC009041.3-201ENST00000564390 TPST2O60704 377 aa22.19■■□□□ 1.14
AC009041.3-201ENST00000564390 DANCRP0C864 163 aa22.19■■□□□ 1.14
AC009041.3-201ENST00000564390 ATP5J2P56134 94 aa22.19■■□□□ 1.14
AC009041.3-201ENST00000564390 METTL21CQ5VZV1 264 aa22.19■■□□□ 1.14
AC009041.3-201ENST00000564390 NIPAL3Q6P499 406 aa22.19■■□□□ 1.14
AC009041.3-201ENST00000564390 PRSS57Q6UWY2 283 aa22.19■■□□□ 1.14
AC009041.3-201ENST00000564390 SSX8Q7RTT4 187 aa22.19■■□□□ 1.14
AC009041.3-201ENST00000564390 EPHX4Q8IUS5 362 aa22.19■■□□□ 1.14
AC009041.3-201ENST00000564390 TSPEARQ8WU66 669 aa22.19■■□□□ 1.14
AC009041.3-201ENST00000564390 DNAJA4Q8WW22 397 aaPredicted RBP22.19■■□□□ 1.14
AC009041.3-201ENST00000564390 SLC38A4Q969I6 547 aa22.19■■□□□ 1.14
AC009041.3-201ENST00000564390 SLC17A5Q9NRA2 495 aa22.19■■□□□ 1.14
AC009041.3-201ENST00000564390 ARID1AO14497 2285 aa22.19■■□□□ 1.14
AC009041.3-201ENST00000564390 M0R082 166 aa22.18■■□□□ 1.14
AC009041.3-201ENST00000564390 KRT33AO76009 404 aa22.18■■□□□ 1.14
AC009041.3-201ENST00000564390 VAMP5O95183 116 aa22.18■■□□□ 1.14
AC009041.3-201ENST00000564390 MPGP29372 298 aa22.18■■□□□ 1.14
AC009041.3-201ENST00000564390 CDKN1AP38936 164 aa22.18■■□□□ 1.14
AC009041.3-201ENST00000564390 RBBP4Q09028 425 aa22.18■■□□□ 1.14
AC009041.3-201ENST00000564390 OR1Q1Q15612 314 aa22.18■■□□□ 1.14
AC009041.3-201ENST00000564390 PGGHGQ32M88 737 aa22.18■■□□□ 1.14
AC009041.3-201ENST00000564390 ULK3Q6PHR2 472 aa22.18■■□□□ 1.14
AC009041.3-201ENST00000564390 TMEM108Q6UXF1 575 aa22.18■■□□□ 1.14
AC009041.3-201ENST00000564390 NET1Q7Z628 596 aaPredicted RBP22.18■■□□□ 1.14
AC009041.3-201ENST00000564390 BIVMQ86UB2 503 aa22.18■■□□□ 1.14
AC009041.3-201ENST00000564390 POMGNT2Q8NAT1 580 aa22.18■■□□□ 1.14
AC009041.3-201ENST00000564390 C1orf162Q8NEQ5 155 aaPredicted RBP22.18■■□□□ 1.14
AC009041.3-201ENST00000564390 GPR32P1Q8NGA4 272 aa22.18■■□□□ 1.14
AC009041.3-201ENST00000564390 ZNF417Q8TAU3 575 aa22.18■■□□□ 1.14
AC009041.3-201ENST00000564390 ZNF587Q96SQ5 575 aaPredicted RBP22.18■■□□□ 1.14
AC009041.3-201ENST00000564390 PIF1Q9H611 641 aa22.18■■□□□ 1.14
AC009041.3-201ENST00000564390 KAT8Q9H7Z6 458 aaKnown RBP22.18■■□□□ 1.14
AC009041.3-201ENST00000564390 CISD1Q9NZ45 108 aaKnown RBP22.18■■□□□ 1.14
AC009041.3-201ENST00000564390 KLHL14Q9P2G3 628 aa22.18■■□□□ 1.14
AC009041.3-201ENST00000564390 TRAV36DV7A0A075B6V5 113 aa22.17■■□□□ 1.14
AC009041.3-201ENST00000564390 A0A0B4J2E0 115 aa22.17■■□□□ 1.14
AC009041.3-201ENST00000564390 A0A1B0GX12 115 aa22.17■■□□□ 1.14
AC009041.3-201ENST00000564390 SMAD7O15105 426 aaKnown RBP22.17■■□□□ 1.14
AC009041.3-201ENST00000564390 VIMP08670 466 aaKnown RBP22.17■■□□□ 1.14
AC009041.3-201ENST00000564390 PAX1P15863 534 aa22.17■■□□□ 1.14
AC009041.3-201ENST00000564390 CD40P25942 277 aa22.17■■□□□ 1.14
AC009041.3-201ENST00000564390 ARFIP2P53365 341 aa22.17■■□□□ 1.14
AC009041.3-201ENST00000564390 TGFBR3Q03167 851 aa22.17■■□□□ 1.14
AC009041.3-201ENST00000564390 TRMT5Q32P41 509 aaKnown RBP22.17■■□□□ 1.14
AC009041.3-201ENST00000564390 HIKESHIQ53FT3 197 aa22.17■■□□□ 1.14
AC009041.3-201ENST00000564390 FAM69AQ5T7M9 428 aa22.17■■□□□ 1.14
AC009041.3-201ENST00000564390 KLHL17Q6TDP4 642 aa22.17■■□□□ 1.14
AC009041.3-201ENST00000564390 LINGO2Q7L985 606 aa22.17■■□□□ 1.14
AC009041.3-201ENST00000564390 RANBP3LQ86VV4 465 aaPredicted RBP22.17■■□□□ 1.14
AC009041.3-201ENST00000564390 C17orf78Q8N4C9 275 aa22.17■■□□□ 1.14
AC009041.3-201ENST00000564390 BHLHE22Q8NFJ8 381 aaPredicted RBP22.17■■□□□ 1.14
AC009041.3-201ENST00000564390 OR10A6Q8NH74 314 aa22.17■■□□□ 1.14
AC009041.3-201ENST00000564390 GTPBP3Q969Y2 492 aaKnown RBP22.17■■□□□ 1.14
AC009041.3-201ENST00000564390 SLC47A1Q96FL8 570 aa22.17■■□□□ 1.14
AC009041.3-201ENST00000564390 COX4I2Q96KJ9 171 aa22.17■■□□□ 1.14
AC009041.3-201ENST00000564390 TMEM27Q9HBJ8 222 aa22.17■■□□□ 1.14
AC009041.3-201ENST00000564390 SELENONQ9NZV5 590 aa22.17■■□□□ 1.14
AC009041.3-201ENST00000564390 B3GAT1Q9P2W7 334 aa22.17■■□□□ 1.14
AC009041.3-201ENST00000564390 M0QX08 132 aa22.16■■□□□ 1.14
AC009041.3-201ENST00000564390 LGI1O95970 557 aa22.16■■□□□ 1.14
AC009041.3-201ENST00000564390 GRPRP30550 384 aa22.16■■□□□ 1.14
AC009041.3-201ENST00000564390 CLDN17P56750 224 aa22.16■■□□□ 1.14
AC009041.3-201ENST00000564390 IL1RL1Q01638 556 aa22.16■■□□□ 1.14
AC009041.3-201ENST00000564390 GUCY1A3Q02108 690 aa22.16■■□□□ 1.14
AC009041.3-201ENST00000564390 DUSP7Q16829 419 aa22.16■■□□□ 1.14
AC009041.3-201ENST00000564390 FAM91A1Q658Y4 838 aa22.16■■□□□ 1.14
AC009041.3-201ENST00000564390 SLC22A25Q6T423 547 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms