RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 C17orf107Q6ZR85 190 aa6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 C9orf139Q6ZV77 190 aa6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 SPATC1Q76KD6 591 aa6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 OLIG3Q7RTU3 272 aa6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 WDFY1Q8IWB7 410 aa6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 TMEM99Q8N816 258 aa6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 IL17RDQ8NFM7 739 aa6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 UBE2FQ969M7 185 aa6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 MRRFQ96E11 262 aaKnown RBP6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 FCRL1Q96LA6 429 aa6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 OR7D2Q96RA2 312 aa6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 MRPL57Q9BQC6 102 aaKnown RBP6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 ACTRT3Q9BYD9 372 aa6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 KRTAP17-1Q9BYP8 105 aa6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 LINC00470Q9BZP3 86 aa6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 MRPL46Q9H2W6 279 aaKnown RBP6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 SERHL2Q9H4I8 314 aa6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 REEP4Q9H6H4 257 aa6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 MMP26Q9NRE1 261 aa6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 OXSMQ9NWU1 459 aa6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 B3GNT2Q9NY97 397 aa6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 C1RLQ9NZP8 487 aa6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 TESQ9UGI8 421 aaKnown RBP6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 WIPI2Q9Y4P8 454 aa6.56□□□□□ -1.36
HERPUD1-206ENST00000563343 DSPPQ9NZW4 1301 aa6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 LOC100653049A0A140TA62 436 aa6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 TMEM72A0PK05 275 aa6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 FAM181BA6NEQ2 426 aa6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 AQP7P3A6NL99 342 aa6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 ZNF208O43345 1280 aa6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 FCMRO60667 390 aa6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 SKAP2O75563 359 aaPredicted RBP6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 KRT34O76011 436 aa6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 NDUFA7O95182 113 aa6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 CSTAP01040 98 aa6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 BCKDHAP12694 445 aa6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 SNRPBP14678 240 aaKnown RBP6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 ZNF14P17017 642 aaPredicted RBP6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 PTMSP20962 102 aa6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 PRPH2P23942 346 aa6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 PCGF2P35227 344 aa6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 ARR3P36575 388 aa6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 MAGEA4P43358 317 aa6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 ATP4BP51164 291 aa6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 PKNOX1P55347 436 aa6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 SH3BGRP55822 239 aaPredicted RBP6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 RAG2P55895 527 aa6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 LCN2P80188 198 aa6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 MRPS25P82663 173 aaKnown RBP6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 ARF1P84077 181 aaKnown RBP6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 NPRL3Q12980 569 aa6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 TAF9Q16594 264 aa6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 MMEL1Q495T6 779 aa6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 ARMCX4Q5H9R4 360 aa6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 VAX1Q5SQQ9 334 aa6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 ZNF362Q5T0B9 420 aaPredicted RBP6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 SAMD5Q5TGI4 173 aa6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 CREB3L2Q70SY1 520 aa6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 MDP1Q86V88 176 aa6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 GAS2L3Q86XJ1 694 aa6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 CREG2Q8IUH2 290 aa6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 LINC00528Q8N1L1 170 aa6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 OR4F5Q8NH21 305 aa6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 PSMA8Q8TAA3 256 aa6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 ADAMTS15Q8TE58 950 aa6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 ZNF837Q96EG3 531 aaPredicted RBP6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 NAA11Q9BSU3 229 aaPredicted RBP6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 PRDM13Q9H4Q3 707 aa6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 BEX1Q9HBH7 125 aa6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 CRLF2Q9HC73 371 aa6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 TNFRSF12AQ9NP84 129 aa6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 PCDHGB4Q9UN71 923 aa6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 POLR3KQ9Y2Y1 108 aaPredicted RBP6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 CACNG2Q9Y698 323 aa6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 EPPK1P58107 5090 aaKnown RBP6.55□□□□□ -1.36
HERPUD1-206ENST00000563343 TMED7-TICAM2A0A0A6YYA0 188 aa6.54□□□□□ -1.36
HERPUD1-206ENST00000563343 MDFIC2A0A1B0GVS7 189 aa6.54□□□□□ -1.36
HERPUD1-206ENST00000563343 CLPSL1A2RUU4 121 aa6.54□□□□□ -1.36
HERPUD1-206ENST00000563343 C17orf100A8MU93 164 aa6.54□□□□□ -1.36
HERPUD1-206ENST00000563343 TRAPPC2LH3BP13 241 aa6.54□□□□□ -1.36
HERPUD1-206ENST00000563343 AKAP10O43572 662 aa6.54□□□□□ -1.36
HERPUD1-206ENST00000563343 CLPXO76031 633 aa6.54□□□□□ -1.36
HERPUD1-206ENST00000563343 ZNF432O94892 652 aa6.54□□□□□ -1.36
HERPUD1-206ENST00000563343 AKR7A3O95154 331 aa6.54□□□□□ -1.36
HERPUD1-206ENST00000563343 PLATP00750 562 aa6.54□□□□□ -1.36
HERPUD1-206ENST00000563343 IGHV4-38-2P0DP08 117 aa6.54□□□□□ -1.36
HERPUD1-206ENST00000563343 BMP2P12643 396 aa6.54□□□□□ -1.36
HERPUD1-206ENST00000563343 ZNF12P17014 697 aa6.54□□□□□ -1.36
HERPUD1-206ENST00000563343 SDC1P18827 310 aa6.54□□□□□ -1.36
HERPUD1-206ENST00000563343 CCNA2P20248 432 aa6.54□□□□□ -1.36
HERPUD1-206ENST00000563343 IMPDH1P20839 514 aa6.54□□□□□ -1.36
HERPUD1-206ENST00000563343 PROK1P58294 105 aa6.54□□□□□ -1.36
HERPUD1-206ENST00000563343 ROR2Q01974 943 aaKnown RBP6.54□□□□□ -1.36
HERPUD1-206ENST00000563343 LCP2Q13094 533 aa6.54□□□□□ -1.36
HERPUD1-206ENST00000563343 ZNF154Q13106 437 aa6.54□□□□□ -1.36
HERPUD1-206ENST00000563343 HLXQ14774 488 aaPredicted RBP6.54□□□□□ -1.36
HERPUD1-206ENST00000563343 JAZF1Q86VZ6 243 aa6.54□□□□□ -1.36
HERPUD1-206ENST00000563343 EPHX4Q8IUS5 362 aa6.54□□□□□ -1.36
HERPUD1-206ENST00000563343 OR5D16Q8NGK9 328 aa6.54□□□□□ -1.36
HERPUD1-206ENST00000563343 ZNF563Q8TA94 476 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms