RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 MDS2Q8NDY4 140 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 MAGEE2Q8TD90 523 aaPredicted RBP4.31□□□□□ -1.72
SMG1-207ENST00000563235 DNAJC9Q8WXX5 260 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 TCEAL3Q969E4 200 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 TLCD1Q96CP7 247 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 TIMD4Q96H15 378 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 SEPHS2Q99611 448 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 MICU1Q9BPX6 476 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 DUSP15Q9H1R2 295 aaPredicted RBP4.31□□□□□ -1.72
SMG1-207ENST00000563235 BCAS3Q9H6U6 928 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 GAREM1Q9H706 876 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 SMYD3Q9H7B4 428 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 TMEM138Q9NPI0 162 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 DKKL1Q9UK85 242 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 FBXO4Q9UKT5 387 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 WDR45Q9Y484 360 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 HS3ST3A1Q9Y663 406 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 ALG5Q9Y673 324 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 PDE4DIPQ5VU43 2346 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 FAM208AQ9UK61 1670 aaKnown RBP4.31□□□□□ -1.72
SMG1-207ENST00000563235 LRP5LA4QPB2 252 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 TMEM8BA6NDV4 472 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 FAM181BA6NEQ2 426 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 VCYO14598 125 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 SPRY2O43597 315 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 ESRRBO95718 433 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 RBP1P09455 135 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 ALDOCP09972 364 aaKnown RBP4.31□□□□□ -1.72
SMG1-207ENST00000563235 FAM228BP0C875 321 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 SNHG28P0DPA3 235 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 NKX2-1P43699 371 aaPredicted RBP4.31□□□□□ -1.72
SMG1-207ENST00000563235 PRLHRP49683 370 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 AGTR2P50052 363 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 IDH3GP51553 393 aaPredicted RBP4.31□□□□□ -1.72
SMG1-207ENST00000563235 PGGT1BP53609 377 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 ADPRHP54922 357 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 RPL19P84098 196 aaKnown RBP4.31□□□□□ -1.72
SMG1-207ENST00000563235 MLLT11Q13015 90 aaPredicted RBP4.31□□□□□ -1.72
SMG1-207ENST00000563235 PTGR1Q14914 329 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 ZNF658BQ4V348 819 aaPredicted RBP4.31□□□□□ -1.72
SMG1-207ENST00000563235 NSUN5P2Q63ZY6 315 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 CYP2R1Q6VVX0 501 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 SLC16A14Q7RTX9 510 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 PIM3Q86V86 326 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 LAS2Q8IYD9 372 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 OR6V1Q8N148 313 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 STX19Q8N4C7 294 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 HSD17B11Q8NBQ5 300 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 OR10X1Q8NGY0 326 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 OR6K3Q8NGY3 331 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 NAT14Q8WUY8 206 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 TFAP2BQ92481 460 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 NR4A3Q92570 626 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 MOB3AQ96BX8 217 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 C8orf44Q96CB5 159 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 CPNE2Q96FN4 548 aaPredicted RBP4.31□□□□□ -1.72
SMG1-207ENST00000563235 QKIQ96PU8 341 aaKnown RBP eCLIP4.31□□□□□ -1.72
SMG1-207ENST00000563235 NEURL2Q9BR09 285 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 HCAR1Q9BXC0 346 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 TLE6Q9H808 572 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 SIAEQ9HAT2 523 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 LRRC4CQ9HCJ2 640 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 ISYNA1Q9NPH2 558 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 GNG12Q9UBI6 72 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 ZDHHC2Q9UIJ5 367 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 ZNF221Q9UK13 617 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 FARSAQ9Y285 508 aaKnown RBP4.31□□□□□ -1.72
SMG1-207ENST00000563235 MRPS18CQ9Y3D5 142 aaKnown RBP4.31□□□□□ -1.72
SMG1-207ENST00000563235 TIMM10BQ9Y5J6 103 aa4.31□□□□□ -1.72
SMG1-207ENST00000563235 CARMIL3Q8ND23 1372 aa4.3□□□□□ -1.72
SMG1-207ENST00000563235 TCRBV7S3A2A0A539 114 aa4.3□□□□□ -1.72
SMG1-207ENST00000563235 GRID2IPA4D2P6 1211 aa4.3□□□□□ -1.72
SMG1-207ENST00000563235 OR6C68A6NDL8 312 aa4.3□□□□□ -1.72
SMG1-207ENST00000563235 FRG2CA6NGY1 282 aa4.3□□□□□ -1.72
SMG1-207ENST00000563235 TVP23AA6NH52 213 aa4.3□□□□□ -1.72
SMG1-207ENST00000563235 CXorf49A8MYA2 514 aaPredicted RBP4.3□□□□□ -1.72
SMG1-207ENST00000563235 M0QYV0 167 aa4.3□□□□□ -1.72
SMG1-207ENST00000563235 MSH4O15457 936 aa4.3□□□□□ -1.72
SMG1-207ENST00000563235 ATXN1LP0C7T5 689 aaKnown RBP4.3□□□□□ -1.72
SMG1-207ENST00000563235 TBXA2RP21731 343 aa4.3□□□□□ -1.72
SMG1-207ENST00000563235 HMGB2P26583 209 aaKnown RBP4.3□□□□□ -1.72
SMG1-207ENST00000563235 ADORA1P30542 326 aa4.3□□□□□ -1.72
SMG1-207ENST00000563235 SSTR1P30872 391 aa4.3□□□□□ -1.72
SMG1-207ENST00000563235 CNR2P34972 360 aa4.3□□□□□ -1.72
SMG1-207ENST00000563235 RPL35P42766 123 aaKnown RBP4.3□□□□□ -1.72
SMG1-207ENST00000563235 EIF2B2P49770 351 aaKnown RBP4.3□□□□□ -1.72
SMG1-207ENST00000563235 OR4D2P58180 307 aa4.3□□□□□ -1.72
SMG1-207ENST00000563235 CDK3Q00526 305 aa4.3□□□□□ -1.72
SMG1-207ENST00000563235 EWSR1Q01844 656 aaKnown RBP eCLIP4.3□□□□□ -1.72
SMG1-207ENST00000563235 KIR3DS1Q14943 382 aa4.3□□□□□ -1.72
SMG1-207ENST00000563235 ZSWIM7Q19AV6 140 aa4.3□□□□□ -1.72
SMG1-207ENST00000563235 OTUD3Q5T2D3 398 aaPredicted RBP4.3□□□□□ -1.72
SMG1-207ENST00000563235 FAM199XQ6PEV8 388 aaPredicted RBP4.3□□□□□ -1.72
SMG1-207ENST00000563235 MDGA2Q7Z553 956 aa4.3□□□□□ -1.72
SMG1-207ENST00000563235 TMPRSS6Q8IU80 811 aa4.3□□□□□ -1.72
SMG1-207ENST00000563235 LRRC52Q8N7C0 313 aa4.3□□□□□ -1.72
SMG1-207ENST00000563235 NANOGP1Q8N7R0 232 aa4.3□□□□□ -1.72
SMG1-207ENST00000563235 ZNF738Q8NE65 137 aa4.3□□□□□ -1.72
SMG1-207ENST00000563235 OR13D1Q8NGV5 346 aa4.3□□□□□ -1.72
SMG1-207ENST00000563235 OR4L1Q8NH43 312 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms