RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 WDR70Q9NW82 654 aa17.37■□□□□ 0.37
SMPD3-203ENST00000563226 ZNF346Q9UL40 294 aaKnown RBP17.37■□□□□ 0.37
SMPD3-203ENST00000563226 GRIP1Q9Y3R0 1128 aa17.37■□□□□ 0.37
SMPD3-203ENST00000563226 TRBV11-1A0A0K0K1C0 115 aa17.36■□□□□ 0.37
SMPD3-203ENST00000563226 HTR3EA5X5Y0 456 aa17.36■□□□□ 0.37
SMPD3-203ENST00000563226 FAM171A2A8MVW0 826 aa17.36■□□□□ 0.37
SMPD3-203ENST00000563226 D6RAR5 112 aa17.36■□□□□ 0.37
SMPD3-203ENST00000563226 CASKO14936 926 aa17.36■□□□□ 0.37
SMPD3-203ENST00000563226 SELENOFO60613 162 aa17.36■□□□□ 0.37
SMPD3-203ENST00000563226 CD14P08571 375 aa17.36■□□□□ 0.37
SMPD3-203ENST00000563226 ZNF28P17035 718 aa17.36■□□□□ 0.37
SMPD3-203ENST00000563226 PGCP20142 388 aa17.36■□□□□ 0.37
SMPD3-203ENST00000563226 CXCR1P25024 350 aa17.36■□□□□ 0.37
SMPD3-203ENST00000563226 ACTC1P68032 377 aa17.36■□□□□ 0.37
SMPD3-203ENST00000563226 ACTA1P68133 377 aa17.36■□□□□ 0.37
SMPD3-203ENST00000563226 QPRTQ15274 297 aa17.36■□□□□ 0.37
SMPD3-203ENST00000563226 ISXQ2M1V0 245 aa17.36■□□□□ 0.37
SMPD3-203ENST00000563226 OR5M10Q6IEU7 315 aa17.36■□□□□ 0.37
SMPD3-203ENST00000563226 VASH1Q7L8A9 365 aaPredicted RBP17.36■□□□□ 0.37
SMPD3-203ENST00000563226 NEIL3Q8TAT5 605 aa17.36■□□□□ 0.37
SMPD3-203ENST00000563226 DUSP19Q8WTR2 217 aa17.36■□□□□ 0.37
SMPD3-203ENST00000563226 ATOH1Q92858 354 aaPredicted RBP17.36■□□□□ 0.37
SMPD3-203ENST00000563226 TP53INP1Q96A56 240 aa17.36■□□□□ 0.37
SMPD3-203ENST00000563226 ABCB9Q9NP78 766 aa17.36■□□□□ 0.37
SMPD3-203ENST00000563226 CMAHPQ9Y471 501 aa17.36■□□□□ 0.37
SMPD3-203ENST00000563226 V9GYH0 126 aa17.36■□□□□ 0.37
SMPD3-203ENST00000563226 FUOMA2VDF0 154 aa17.36■□□□□ 0.37
SMPD3-203ENST00000563226 ONECUT2O95948 504 aa17.36■□□□□ 0.37
SMPD3-203ENST00000563226 BGLAPP02818 100 aa17.36■□□□□ 0.37
SMPD3-203ENST00000563226 GP1BBP13224 206 aa17.36■□□□□ 0.37
SMPD3-203ENST00000563226 DIO1P49895 249 aa17.36■□□□□ 0.37
SMPD3-203ENST00000563226 P2RX1P51575 399 aa17.36■□□□□ 0.37
SMPD3-203ENST00000563226 NRG3P56975 720 aa17.36■□□□□ 0.37
SMPD3-203ENST00000563226 CBFBQ13951 182 aa17.36■□□□□ 0.37
SMPD3-203ENST00000563226 TP53I3Q53FA7 332 aa17.36■□□□□ 0.37
SMPD3-203ENST00000563226 ZMAT1Q5H9K5 638 aa17.36■□□□□ 0.37
SMPD3-203ENST00000563226 NANOGNBQ7Z5D8 188 aa17.36■□□□□ 0.37
SMPD3-203ENST00000563226 OR6K6Q8NGW6 343 aa17.36■□□□□ 0.37
SMPD3-203ENST00000563226 GPR119Q8TDV5 335 aa17.36■□□□□ 0.37
SMPD3-203ENST00000563226 TSSK2Q96PF2 358 aa17.36■□□□□ 0.37
SMPD3-203ENST00000563226 COQ7Q99807 217 aa17.36■□□□□ 0.37
SMPD3-203ENST00000563226 CRB3Q9BUF7 120 aa17.36■□□□□ 0.37
SMPD3-203ENST00000563226 COPS3Q9UNS2 423 aa17.36■□□□□ 0.37
SMPD3-203ENST00000563226 MEN1O00255 615 aa17.35■□□□□ 0.37
SMPD3-203ENST00000563226 IDH3BO43837 385 aa17.35■□□□□ 0.37
SMPD3-203ENST00000563226 CDC40O60508 579 aaKnown RBP eCLIP17.35■□□□□ 0.37
SMPD3-203ENST00000563226 RGS9O75916 674 aaPredicted RBP17.35■□□□□ 0.37
SMPD3-203ENST00000563226 CER1O95813 267 aa17.35■□□□□ 0.37
SMPD3-203ENST00000563226 PYCR1P32322 319 aa17.35■□□□□ 0.37
SMPD3-203ENST00000563226 SLC3A1Q07837 685 aa17.35■□□□□ 0.37
SMPD3-203ENST00000563226 GPR50Q13585 617 aa17.35■□□□□ 0.37
SMPD3-203ENST00000563226 PON3Q15166 354 aa17.35■□□□□ 0.37
SMPD3-203ENST00000563226 SLC35F2Q8IXU6 374 aa17.35■□□□□ 0.37
SMPD3-203ENST00000563226 PMEPA1Q969W9 287 aa17.35■□□□□ 0.37
SMPD3-203ENST00000563226 WDFY2Q96P53 400 aa17.35■□□□□ 0.37
SMPD3-203ENST00000563226 TSPAN32Q96QS1 320 aa17.35■□□□□ 0.37
SMPD3-203ENST00000563226 PTDSS2Q9BVG9 487 aa17.35■□□□□ 0.37
SMPD3-203ENST00000563226 PPIL3Q9H2H8 161 aaKnown RBP17.35■□□□□ 0.37
SMPD3-203ENST00000563226 RPRD1BQ9NQG5 326 aaKnown RBP17.35■□□□□ 0.37
SMPD3-203ENST00000563226 PPIEQ9UNP9 301 aaKnown RBP17.35■□□□□ 0.37
SMPD3-203ENST00000563226 ANKRD33BA6NCL7 494 aa17.35■□□□□ 0.37
SMPD3-203ENST00000563226 LOC110117498-PIK3R3F6TDL0 507 aa17.35■□□□□ 0.37
SMPD3-203ENST00000563226 H7C1C5 153 aa17.35■□□□□ 0.37
SMPD3-203ENST00000563226 LCN6P62502 163 aa17.35■□□□□ 0.37
SMPD3-203ENST00000563226 LINC01590Q5TEZ4 76 aa17.35■□□□□ 0.37
SMPD3-203ENST00000563226 LCN1P1Q5VSP4 162 aa17.35■□□□□ 0.37
SMPD3-203ENST00000563226 FAM199XQ6PEV8 388 aaPredicted RBP17.35■□□□□ 0.37
SMPD3-203ENST00000563226 CPEB2Q7Z5Q1 589 aaKnown RBP17.35■□□□□ 0.37
SMPD3-203ENST00000563226 GPALPP1Q8IXQ4 340 aa17.35■□□□□ 0.37
SMPD3-203ENST00000563226 POMGNT2Q8NAT1 580 aa17.35■□□□□ 0.37
SMPD3-203ENST00000563226 NPAS1Q99742 590 aa17.35■□□□□ 0.37
SMPD3-203ENST00000563226 GALNT9Q9HCQ5 603 aa17.35■□□□□ 0.37
SMPD3-203ENST00000563226 C14orf119Q9NWQ9 140 aa17.35■□□□□ 0.37
SMPD3-203ENST00000563226 ZNF229Q9UJW7 825 aa17.35■□□□□ 0.37
SMPD3-203ENST00000563226 POLHQ9Y253 713 aa17.35■□□□□ 0.37
SMPD3-203ENST00000563226 TMEM72A0PK05 275 aa17.34■□□□□ 0.37
SMPD3-203ENST00000563226 SLC35F4A4IF30 521 aa17.34■□□□□ 0.37
SMPD3-203ENST00000563226 NTN3O00634 580 aaPredicted RBP17.34■□□□□ 0.37
SMPD3-203ENST00000563226 FGF5P12034 268 aa17.34■□□□□ 0.37
SMPD3-203ENST00000563226 SDHAP31040 664 aa17.34■□□□□ 0.37
SMPD3-203ENST00000563226 ACVR1BP36896 505 aa17.34■□□□□ 0.37
SMPD3-203ENST00000563226 BCAP31P51572 246 aa17.34■□□□□ 0.37
SMPD3-203ENST00000563226 LGALS3BPQ08380 585 aa17.34■□□□□ 0.37
SMPD3-203ENST00000563226 ZNF79Q15937 498 aa17.34■□□□□ 0.37
SMPD3-203ENST00000563226 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.34■□□□□ 0.37
SMPD3-203ENST00000563226 COL28A1Q2UY09 1125 aa17.34■□□□□ 0.37
SMPD3-203ENST00000563226 FAM27D1Q5T7N8 215 aa17.34■□□□□ 0.37
SMPD3-203ENST00000563226 SLC23A3Q6PIS1 610 aa17.34■□□□□ 0.37
SMPD3-203ENST00000563226 BMPERQ8N8U9 685 aa17.34■□□□□ 0.37
SMPD3-203ENST00000563226 EXD3Q8N9H8 876 aa17.34■□□□□ 0.37
SMPD3-203ENST00000563226 CEP76Q8TAP6 659 aa17.34■□□□□ 0.37
SMPD3-203ENST00000563226 NUBPLQ8TB37 319 aa17.34■□□□□ 0.37
SMPD3-203ENST00000563226 PGLYRP3Q96LB9 341 aa17.34■□□□□ 0.37
SMPD3-203ENST00000563226 FKRPQ9H9S5 495 aa17.34■□□□□ 0.37
SMPD3-203ENST00000563226 ST6GALNAC2Q9UJ37 374 aa17.34■□□□□ 0.37
SMPD3-203ENST00000563226 UGT2A1Q9Y4X1 527 aa17.34■□□□□ 0.37
SMPD3-203ENST00000563226 HRH3Q9Y5N1 445 aa17.34■□□□□ 0.37
SMPD3-203ENST00000563226 NOX1Q9Y5S8 564 aa17.34■□□□□ 0.37
SMPD3-203ENST00000563226 KIF26BQ2KJY2 2108 aa17.34■□□□□ 0.37
SMPD3-203ENST00000563226 TRAV36DV7A0A075B6V5 113 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms