RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 PKNOX2Q96KN3 472 aa10.09□□□□□ -0.79
NSMCE1-202ENST00000561960 PRPF18Q99633 342 aaKnown RBP10.09□□□□□ -0.79
NSMCE1-202ENST00000561960 DOK1Q99704 481 aa10.09□□□□□ -0.79
NSMCE1-202ENST00000561960 SLC35A5Q9BS91 424 aa10.09□□□□□ -0.79
NSMCE1-202ENST00000561960 KATNB1Q9BVA0 655 aa10.09□□□□□ -0.79
NSMCE1-202ENST00000561960 C1QTNF5Q9BXJ0 243 aa10.09□□□□□ -0.79
NSMCE1-202ENST00000561960 NOX3Q9HBY0 568 aa10.09□□□□□ -0.79
NSMCE1-202ENST00000561960 CRLF2Q9HC73 371 aa10.09□□□□□ -0.79
NSMCE1-202ENST00000561960 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.09□□□□□ -0.79
NSMCE1-202ENST00000561960 MARCOQ9UEW3 520 aaPredicted RBP10.09□□□□□ -0.79
NSMCE1-202ENST00000561960 TRAPPC4Q9Y296 219 aa10.09□□□□□ -0.79
NSMCE1-202ENST00000561960 WDR91A4D1P6 747 aa10.08□□□□□ -0.8
NSMCE1-202ENST00000561960 AQP7P3A6NL99 342 aa10.08□□□□□ -0.8
NSMCE1-202ENST00000561960 DUXAA6NLW8 204 aa10.08□□□□□ -0.8
NSMCE1-202ENST00000561960 FRS3O43559 492 aa10.08□□□□□ -0.8
NSMCE1-202ENST00000561960 ITM2AO43736 263 aa10.08□□□□□ -0.8
NSMCE1-202ENST00000561960 EIF1BO60739 113 aaKnown RBP10.08□□□□□ -0.8
NSMCE1-202ENST00000561960 AK1P00568 194 aa10.08□□□□□ -0.8
NSMCE1-202ENST00000561960 AVPP01185 164 aa10.08□□□□□ -0.8
NSMCE1-202ENST00000561960 HPXP02790 462 aa10.08□□□□□ -0.8
NSMCE1-202ENST00000561960 GPIP06744 558 aa10.08□□□□□ -0.8
NSMCE1-202ENST00000561960 CREB1P16220 341 aa10.08□□□□□ -0.8
NSMCE1-202ENST00000561960 CXCR1P25024 350 aa10.08□□□□□ -0.8
NSMCE1-202ENST00000561960 CDKN2CP42773 168 aa10.08□□□□□ -0.8
NSMCE1-202ENST00000561960 P2RY4P51582 365 aa10.08□□□□□ -0.8
NSMCE1-202ENST00000561960 CLDN17P56750 224 aa10.08□□□□□ -0.8
NSMCE1-202ENST00000561960 PIGFQ07326 219 aa10.08□□□□□ -0.8
NSMCE1-202ENST00000561960 RIN1Q13671 783 aa10.08□□□□□ -0.8
NSMCE1-202ENST00000561960 EFNB3Q15768 340 aa10.08□□□□□ -0.8
NSMCE1-202ENST00000561960 RPS26P11Q5JNZ5 115 aaPredicted RBP10.08□□□□□ -0.8
NSMCE1-202ENST00000561960 ELFN2Q5R3F8 820 aa10.08□□□□□ -0.8
NSMCE1-202ENST00000561960 AVPI1Q5T686 147 aa10.08□□□□□ -0.8
NSMCE1-202ENST00000561960 PRAMEF8Q5VWM4 474 aa10.08□□□□□ -0.8
NSMCE1-202ENST00000561960 PRAMEF7Q5VXH5 474 aa10.08□□□□□ -0.8
NSMCE1-202ENST00000561960 SAXO2Q658L1 398 aa10.08□□□□□ -0.8
NSMCE1-202ENST00000561960 SHQ1Q6PI26 577 aaKnown RBP10.08□□□□□ -0.8
NSMCE1-202ENST00000561960 PAQR6Q6TCH4 344 aa10.08□□□□□ -0.8
NSMCE1-202ENST00000561960 C1orf229Q6ZS94 237 aaPredicted RBP10.08□□□□□ -0.8
NSMCE1-202ENST00000561960 CREB3L2Q70SY1 520 aa10.08□□□□□ -0.8
NSMCE1-202ENST00000561960 GLCCI1Q86VQ1 547 aa10.08□□□□□ -0.8
NSMCE1-202ENST00000561960 EPHX4Q8IUS5 362 aa10.08□□□□□ -0.8
NSMCE1-202ENST00000561960 IFT20Q8IY31 132 aa10.08□□□□□ -0.8
NSMCE1-202ENST00000561960 POMGNT2Q8NAT1 580 aa10.08□□□□□ -0.8
NSMCE1-202ENST00000561960 ZNF540Q8NDQ6 660 aa10.08□□□□□ -0.8
NSMCE1-202ENST00000561960 YIPF5Q969M3 257 aa10.08□□□□□ -0.8
NSMCE1-202ENST00000561960 TMEM45BQ96B21 275 aa10.08□□□□□ -0.8
NSMCE1-202ENST00000561960 LRRC37BQ96QE4 947 aa10.08□□□□□ -0.8
NSMCE1-202ENST00000561960 MRPL37Q9BZE1 423 aaKnown RBP10.08□□□□□ -0.8
NSMCE1-202ENST00000561960 SLC38A1Q9H2H9 487 aa10.08□□□□□ -0.8
NSMCE1-202ENST00000561960 OR51B6Q9H340 312 aa10.08□□□□□ -0.8
NSMCE1-202ENST00000561960 MYOZ1Q9NP98 299 aaPredicted RBP10.08□□□□□ -0.8
NSMCE1-202ENST00000561960 PCDHGB4Q9UN71 923 aa10.08□□□□□ -0.8
NSMCE1-202ENST00000561960 VWFP04275 2813 aa10.08□□□□□ -0.8
NSMCE1-202ENST00000561960 CFAP73A6NFT4 308 aa10.07□□□□□ -0.8
NSMCE1-202ENST00000561960 DNPH1O43598 174 aa10.07□□□□□ -0.8
NSMCE1-202ENST00000561960 NPHS1O60500 1241 aa10.07□□□□□ -0.8
NSMCE1-202ENST00000561960 NCR1O76036 304 aa10.07□□□□□ -0.8
NSMCE1-202ENST00000561960 FGF4P08620 206 aa10.07□□□□□ -0.8
NSMCE1-202ENST00000561960 NAT2P11245 290 aa10.07□□□□□ -0.8
NSMCE1-202ENST00000561960 UQCRC2P22695 453 aa10.07□□□□□ -0.8
NSMCE1-202ENST00000561960 DVL1P1P54792 670 aaPredicted RBP10.07□□□□□ -0.8
NSMCE1-202ENST00000561960 AQP5P55064 265 aa10.07□□□□□ -0.8
NSMCE1-202ENST00000561960 NAA20P61599 178 aa10.07□□□□□ -0.8
NSMCE1-202ENST00000561960 EPS8Q12929 822 aa10.07□□□□□ -0.8
NSMCE1-202ENST00000561960 DAG1Q14118 895 aa10.07□□□□□ -0.8
NSMCE1-202ENST00000561960 CHI3L2Q15782 390 aa10.07□□□□□ -0.8
NSMCE1-202ENST00000561960 SPANXN4Q5MJ08 99 aa10.07□□□□□ -0.8
NSMCE1-202ENST00000561960 PHYHD1Q5SRE7 291 aa10.07□□□□□ -0.8
NSMCE1-202ENST00000561960 ZNF836Q6ZNA1 936 aa10.07□□□□□ -0.8
NSMCE1-202ENST00000561960 RNF165Q6ZSG1 346 aa10.07□□□□□ -0.8
NSMCE1-202ENST00000561960 WDFY1Q8IWB7 410 aa10.07□□□□□ -0.8
NSMCE1-202ENST00000561960 ZNF786Q8N393 782 aa10.07□□□□□ -0.8
NSMCE1-202ENST00000561960 MNS1Q8NEH6 495 aa10.07□□□□□ -0.8
NSMCE1-202ENST00000561960 APOPT1Q96IL0 206 aa10.07□□□□□ -0.8
NSMCE1-202ENST00000561960 TEX37Q96LM6 180 aa10.07□□□□□ -0.8
NSMCE1-202ENST00000561960 DUX5Q96PT3 197 aa10.07□□□□□ -0.8
NSMCE1-202ENST00000561960 SLC6A7Q99884 636 aa10.07□□□□□ -0.8
NSMCE1-202ENST00000561960 AKTIPQ9H8T0 292 aa10.07□□□□□ -0.8
NSMCE1-202ENST00000561960 PCDHGB1Q9Y5G3 927 aa10.07□□□□□ -0.8
NSMCE1-202ENST00000561960 ZNF208O43345 1280 aa10.06□□□□□ -0.8
NSMCE1-202ENST00000561960 PPIHO43447 177 aaKnown RBP10.06□□□□□ -0.8
NSMCE1-202ENST00000561960 CDC14BO60729 498 aa10.06□□□□□ -0.8
NSMCE1-202ENST00000561960 IGLV1-44P01699 117 aa10.06□□□□□ -0.8
NSMCE1-202ENST00000561960 HLA-HP01893 362 aa10.06□□□□□ -0.8
NSMCE1-202ENST00000561960 ERCC1P07992 297 aaPredicted RBP10.06□□□□□ -0.8
NSMCE1-202ENST00000561960 SAGP10523 405 aaPredicted RBP10.06□□□□□ -0.8
NSMCE1-202ENST00000561960 CD79AP11912 226 aa10.06□□□□□ -0.8
NSMCE1-202ENST00000561960 IL7RP16871 459 aa10.06□□□□□ -0.8
NSMCE1-202ENST00000561960 GPR6P46095 362 aaPredicted RBP10.06□□□□□ -0.8
NSMCE1-202ENST00000561960 RPS5P46782 204 aaKnown RBP10.06□□□□□ -0.8
NSMCE1-202ENST00000561960 CLDN8P56748 225 aa10.06□□□□□ -0.8
NSMCE1-202ENST00000561960 CEACAM16Q2WEN9 425 aa10.06□□□□□ -0.8
NSMCE1-202ENST00000561960 C1orf140Q5VVS0 124 aa10.06□□□□□ -0.8
NSMCE1-202ENST00000561960 MIPOL1Q8TD10 442 aa10.06□□□□□ -0.8
NSMCE1-202ENST00000561960 TMEM186Q96B77 213 aa10.06□□□□□ -0.8
NSMCE1-202ENST00000561960 TAPBPLQ9BX59 468 aa10.06□□□□□ -0.8
NSMCE1-202ENST00000561960 DPY30Q9C005 99 aa10.06□□□□□ -0.8
NSMCE1-202ENST00000561960 SAP130Q9H0E3 1048 aa10.06□□□□□ -0.8
NSMCE1-202ENST00000561960 ESM1Q9NQ30 184 aa10.06□□□□□ -0.8
NSMCE1-202ENST00000561960 EXOSC3Q9NQT5 275 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms