RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 MT-ND1P03886 318 aa3□□□□□ -1.93
HERC1-215ENST00000561436 IVLP07476 585 aa3□□□□□ -1.93
HERC1-215ENST00000561436 SLC35G4P0C7Q5 338 aa3□□□□□ -1.93
HERC1-215ENST00000561436 THRAP10827 490 aa3□□□□□ -1.93
HERC1-215ENST00000561436 CCNB1P14635 433 aa3□□□□□ -1.93
HERC1-215ENST00000561436 TCN2P20062 427 aa3□□□□□ -1.93
HERC1-215ENST00000561436 CD1CP29017 333 aa3□□□□□ -1.93
HERC1-215ENST00000561436 PRDX2P32119 198 aa3□□□□□ -1.93
HERC1-215ENST00000561436 CCNHP51946 323 aaPredicted RBP3□□□□□ -1.93
HERC1-215ENST00000561436 METAP1P53582 386 aa3□□□□□ -1.93
HERC1-215ENST00000561436 SCGB2A2Q13296 93 aa3□□□□□ -1.93
HERC1-215ENST00000561436 RFTN1Q14699 578 aaPredicted RBP3□□□□□ -1.93
HERC1-215ENST00000561436 IGFBP7Q16270 282 aa3□□□□□ -1.93
HERC1-215ENST00000561436 PARP15Q460N3 678 aa3□□□□□ -1.93
HERC1-215ENST00000561436 ACSF3Q4G176 576 aaPredicted RBP3□□□□□ -1.93
HERC1-215ENST00000561436 LDLRAP1Q5SW96 308 aa3□□□□□ -1.93
HERC1-215ENST00000561436 SYPL2Q5VXT5 272 aa3□□□□□ -1.93
HERC1-215ENST00000561436 UNC5DQ6UXZ4 953 aa3□□□□□ -1.93
HERC1-215ENST00000561436 TSEN54Q7Z6J9 526 aaKnown RBP3□□□□□ -1.93
HERC1-215ENST00000561436 MISPQ8IVT2 679 aa3□□□□□ -1.93
HERC1-215ENST00000561436 ABHD12Q8N2K0 398 aa3□□□□□ -1.93
HERC1-215ENST00000561436 RELL2Q8NC24 303 aaPredicted RBP3□□□□□ -1.93
HERC1-215ENST00000561436 OR10G6Q8NH81 332 aa3□□□□□ -1.93
HERC1-215ENST00000561436 ZNF606Q8WXB4 792 aa3□□□□□ -1.93
HERC1-215ENST00000561436 NDRG1Q92597 394 aaKnown RBP3□□□□□ -1.93
HERC1-215ENST00000561436 TAF15Q92804 592 aaKnown RBP eCLIP3□□□□□ -1.93
HERC1-215ENST00000561436 DHTKD1Q96HY7 919 aaPredicted RBP3□□□□□ -1.93
HERC1-215ENST00000561436 C16orf45Q96MC5 204 aaPredicted RBP3□□□□□ -1.93
HERC1-215ENST00000561436 IP6K3Q96PC2 410 aa3□□□□□ -1.93
HERC1-215ENST00000561436 NPY6RQ99463 290 aa3□□□□□ -1.93
HERC1-215ENST00000561436 FICDQ9BVA6 458 aa3□□□□□ -1.93
HERC1-215ENST00000561436 BLZF1Q9H2G9 400 aa3□□□□□ -1.93
HERC1-215ENST00000561436 DPH5Q9H2P9 285 aa3□□□□□ -1.93
HERC1-215ENST00000561436 TAS2R3Q9NYW6 316 aa3□□□□□ -1.93
HERC1-215ENST00000561436 SENP1Q9P0U3 644 aa3□□□□□ -1.93
HERC1-215ENST00000561436 XPO7Q9UIA9 1087 aaKnown RBP3□□□□□ -1.93
HERC1-215ENST00000561436 EMCNQ9ULC0 261 aa3□□□□□ -1.93
HERC1-215ENST00000561436 FZR1Q9UM11 496 aa3□□□□□ -1.93
HERC1-215ENST00000561436 MGAT4BQ9UQ53 548 aa3□□□□□ -1.93
HERC1-215ENST00000561436 CA5BQ9Y2D0 317 aa3□□□□□ -1.93
HERC1-215ENST00000561436 DHRS7Q9Y394 339 aa3□□□□□ -1.93
HERC1-215ENST00000561436 ATP6V1DQ9Y5K8 247 aa3□□□□□ -1.93
HERC1-215ENST00000561436 MYO10Q9HD67 2058 aa3□□□□□ -1.93
HERC1-215ENST00000561436 SMG1Q96Q15 3661 aaKnown RBP3□□□□□ -1.93
HERC1-215ENST00000561436 HELZ2Q9BYK8 2649 aaKnown RBP3□□□□□ -1.93
HERC1-215ENST00000561436 FBN3Q75N90 2809 aa3□□□□□ -1.93
HERC1-215ENST00000561436 MIA3Q5JRA6 1907 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 CEP295Q9C0D2 2601 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 IGHV1OR21-1A0A087WYE8 117 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 A0A0A6YYD4 124 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 A0A0D9SEW6 157 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 FAM230AA0A1W2PPH8 454 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 RGSL1A5PLK6 1076 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 LRIT2A6NDA9 550 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 ANKRD30BLA7E2S9 258 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 EPM2AB3EWF7 344 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 GPR89AB7ZAQ6 455 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 NPIPA2E9PIF3 369 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 H3BTX0 84 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 K7ERQ8 282 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 POLR1CO15160 346 aaPredicted RBP2.99□□□□□ -1.93
HERC1-215ENST00000561436 DUX1O43812 170 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 NOL3O60936 208 aaKnown RBP2.99□□□□□ -1.93
HERC1-215ENST00000561436 SCGB2A1O75556 95 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 PDE5AO76074 875 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 AKR7A3O95154 331 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 SMC2O95347 1197 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 IGSF6O95976 241 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 GOT2P00505 430 aaKnown RBP2.99□□□□□ -1.93
HERC1-215ENST00000561436 FGF1P05230 155 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 GPR89BP0CG08 455 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 CCL4P13236 92 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 TNNI3P19429 210 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 UCP1P25874 307 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 CDH5P33151 784 aaPredicted RBP2.99□□□□□ -1.93
HERC1-215ENST00000561436 SYKP43405 635 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 HTD2P86397 168 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 C1orf61Q13536 156 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 EIF2B1Q14232 305 aaKnown RBP2.99□□□□□ -1.93
HERC1-215ENST00000561436 C16orf72Q14CZ0 275 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 IRF4Q15306 451 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 KLHL40Q2TBA0 621 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 ANKRD55Q3KP44 614 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 GLIPR1L2Q4G1C9 344 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 ZNF658Q5TYW1 1059 aaPredicted RBP2.99□□□□□ -1.93
HERC1-215ENST00000561436 TAF3Q5VWG9 929 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 SPECC1LQ69YQ0 1117 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 PNCKQ6P2M8 343 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 STRADAQ7RTN6 431 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 SLC25A42Q86VD7 318 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 DEFB106AQ8N104 65 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 BCORP1Q8N888 145 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 ZNF485Q8NCK3 441 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 TMEM35BQ8NCS4 154 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 OR2L2Q8NH16 312 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 OR52J3Q8NH60 311 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 STARD8Q92502 1023 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 TOMM40LQ969M1 308 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 RAB33BQ9H082 229 aa2.99□□□□□ -1.93
HERC1-215ENST00000561436 SYNDIG1Q9H7V2 258 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms