RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 RFX4Q33E94 735 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 FBXL19-AS1Q494R0 122 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 RFTN2Q52LD8 501 aaPredicted RBP2.86□□□□□ -1.95
SPG11-225ENST00000561391 SPIN4Q56A73 249 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 XKR6Q5GH73 641 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 C1orf185Q5T7R7 199 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 RIPPLY2Q5TAB7 128 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 ACSM2BQ68CK6 577 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 ZNF425Q6IV72 752 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 CAPN13Q6MZZ7 669 aaPredicted RBP2.86□□□□□ -1.95
SPG11-225ENST00000561391 NANOGP8Q6NSW7 305 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 MED27Q6P2C8 311 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 AGTRAPQ6RW13 159 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 ZBTB49Q6ZSB9 765 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 SLC16A12Q6ZSM3 486 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 COX15Q7KZN9 410 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 RRM2BQ7LG56 351 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 SERPINA11Q86U17 422 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 GPAT4Q86UL3 456 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 AMZ2Q86W34 360 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 THOC6Q86W42 341 aaKnown RBP2.86□□□□□ -1.95
SPG11-225ENST00000561391 ARMC8Q8IUR7 673 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 SLC30A8Q8IWU4 369 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 SVOPLQ8N434 492 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 TBC1D19Q8N5T2 526 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 TRIML2Q8N7C3 387 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 RASGEF1AQ8N9B8 481 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 OR2T12Q8NG77 320 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 OR52B6Q8NGF0 335 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 OR9A1PQ8NGU1 263 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 OR2L2Q8NH16 312 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 ZCCHC10Q8TBK6 192 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 PNPT1Q8TCS8 783 aaKnown RBP2.86□□□□□ -1.95
SPG11-225ENST00000561391 SLC13A3Q8WWT9 602 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 SELENOMQ8WWX9 145 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 NCLNQ969V3 563 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 RAD51AP1Q96B01 352 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 MTERF3Q96E29 417 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 WDR34Q96EX3 536 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 ART5Q96L15 291 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 MARK4Q96L34 752 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 ZNF597Q96LX8 424 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 KLHL15Q96M94 604 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 NSMCE2Q96MF7 247 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 RNF145Q96MT1 663 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 ZNF570Q96NI8 536 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 RDH12Q96NR8 316 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 SMIM14Q96QK8 99 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 OR52E6Q96RD3 313 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 CGREF1Q99674 301 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 NRTNQ99748 197 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 RHNO1Q9BSD3 238 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 THUMPD3Q9BV44 507 aaKnown RBP2.86□□□□□ -1.95
SPG11-225ENST00000561391 RAB11FIP5Q9BXF6 653 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 OR2AG1Q9H205 316 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 SLCO5A1Q9H2Y9 848 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 RAD21L1Q9H4I0 556 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 MAGIXQ9H6Y5 334 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 NT5DC2Q9H857 520 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 WDR54Q9H977 334 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 MAP6D1Q9H9H5 199 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 NANOGQ9H9S0 305 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 FN3KRPQ9HA64 309 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 SH2D2AQ9NP31 389 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 SLC52A3Q9NQ40 469 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 SNTG1Q9NSN8 517 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 FAM120CQ9NX05 1096 aaKnown RBP2.86□□□□□ -1.95
SPG11-225ENST00000561391 NDRG3Q9UGV2 375 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 C3orf18Q9UK00 162 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 PCDHGB4Q9UN71 923 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 SLC22A14Q9Y267 594 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 RNF11Q9Y3C5 154 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 CCL27Q9Y4X3 112 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 ORC6Q9Y5N6 252 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 GMEB1Q9Y692 573 aa2.86□□□□□ -1.95
SPG11-225ENST00000561391 YLPM1P49750 1951 aaKnown RBP2.85□□□□□ -1.95
SPG11-225ENST00000561391 IGHV4-30-2A0A087WSY4 118 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 A0A087WXM4 84 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 IGHV3-20A0A0C4DH32 117 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 SLC5A10A0PJK1 596 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 ELOVL7A1L3X0 281 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 RBMY1BA6NDE4 496 aaKnown RBP2.85□□□□□ -1.95
SPG11-225ENST00000561391 RBMY1EA6NEQ0 496 aaKnown RBP2.85□□□□□ -1.95
SPG11-225ENST00000561391 VSTM2BA6NLU5 285 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 DEFB108AA8MXU0 73 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 EEF1E1-BLOC1S5C9J1V9 151 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 H3BMH7 237 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 NME4O00746 187 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 SOCS2O14508 198 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 TXNDC9O14530 226 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 RFXANKO14593 260 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 GNGT2O14610 69 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 BCKDKO14874 412 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 ARPC2O15144 300 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 KMOO15229 486 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 EEF1E1O43324 174 aaKnown RBP2.85□□□□□ -1.95
SPG11-225ENST00000561391 SSX4O60224 188 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 NDUFS7O75251 213 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 SLC25A12O75746 678 aa2.85□□□□□ -1.95
SPG11-225ENST00000561391 POP7O75817 140 aaKnown RBP2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms