RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 TRADDQ15628 312 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 TOMM34Q15785 309 aaPredicted RBP4.48□□□□□ -1.69
HERC1-213ENST00000561359 ALKBH6Q3KRA9 238 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 C3orf36Q3SXR2 165 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 FAM209AQ5JX71 171 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 SPANXN3Q5MJ09 141 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 CASC10Q5T4H9 136 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 TSPO2Q5TGU0 170 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 FAM205BPQ63HN1 556 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 TTC19Q6DKK2 380 aaPredicted RBP4.48□□□□□ -1.69
HERC1-213ENST00000561359 C3orf33Q6P1S2 294 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 DRICH1Q6PGQ1 229 aaPredicted RBP4.48□□□□□ -1.69
HERC1-213ENST00000561359 TMEM107Q6UX40 140 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 TMPPEQ6ZT21 453 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 Q6ZTK2 550 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 C9orf139Q6ZV77 190 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 MEPCEQ7L2J0 689 aaKnown RBP4.48□□□□□ -1.69
HERC1-213ENST00000561359 METTL4Q8N3J2 472 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 KLHL36Q8N4N3 616 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 MMGT1Q8N4V1 131 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 TMCO5AQ8N6Q1 288 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 DTX3Q8N9I9 347 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 KIF18AQ8NI77 898 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 PIGXQ8TBF5 258 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 WDR20Q8TBZ3 569 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 GPR151Q8TDV0 419 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 PIK3R3Q92569 461 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 RAB1CQ92928 201 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 CERS2Q96G23 380 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 C8orf49Q96NF6 230 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 B9D2Q9BPU9 175 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 NOX3Q9HBY0 568 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 CRLF2Q9HC73 371 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 MOV10Q9HCE1 1003 aaKnown RBP4.48□□□□□ -1.69
HERC1-213ENST00000561359 DDX18Q9NVP1 670 aaKnown RBP4.48□□□□□ -1.69
HERC1-213ENST00000561359 TMEM45AQ9NWC5 275 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 CRNNQ9UBG3 495 aaPredicted RBP4.48□□□□□ -1.69
HERC1-213ENST00000561359 FZR1Q9UM11 496 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 SLC12A4Q9UP95 1085 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 RNF11Q9Y3C5 154 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 NOX1Q9Y5S8 564 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 U3KQK5 164 aa4.48□□□□□ -1.69
HERC1-213ENST00000561359 A0A087WV62 115 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 TRAV40A0A0B4J280 105 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 IGHV1-69-2A0A0G2JMI3 117 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 A0A1W2PPW3 197 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 RBMY1BA6NDE4 496 aaKnown RBP4.47□□□□□ -1.69
HERC1-213ENST00000561359 RBMY1EA6NEQ0 496 aaKnown RBP4.47□□□□□ -1.69
HERC1-213ENST00000561359 CXorf49A8MYA2 514 aaPredicted RBP4.47□□□□□ -1.69
HERC1-213ENST00000561359 H0YL77 283 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 UBXN8O00124 270 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 GTPBP1O00178 669 aaKnown RBP4.47□□□□□ -1.69
HERC1-213ENST00000561359 TPD52L2O43399 206 aaKnown RBP4.47□□□□□ -1.69
HERC1-213ENST00000561359 UGDHO60701 494 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 BANF1O75531 89 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 IPO7O95373 1038 aaKnown RBP4.47□□□□□ -1.69
HERC1-213ENST00000561359 LGI1O95970 557 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 IGHMP01871 453 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 RBMY1DP0C7P1 496 aaKnown RBP4.47□□□□□ -1.69
HERC1-213ENST00000561359 TFPIP10646 304 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 ZNF12P17014 697 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 NAT1P18440 290 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 NR4A1P22736 598 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 MAGEA8P43361 318 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 MAGEB1P43366 347 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 P2RX1P51575 399 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 CCR4P51679 360 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 RPL15P61313 204 aaKnown RBP4.47□□□□□ -1.69
HERC1-213ENST00000561359 ATP6V0D1P61421 351 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 ZNF117Q03924 483 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 CD226Q15762 336 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 SGO1Q5FBB7 561 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 TECRLQ5HYJ1 363 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 CD276Q5ZPR3 534 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 TMEM154Q6P9G4 183 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 BRD3OSQ6XYD6 125 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 ABHD12BQ7Z5M8 362 aaPredicted RBP4.47□□□□□ -1.69
HERC1-213ENST00000561359 MYPOPQ86VE0 399 aaPredicted RBP4.47□□□□□ -1.69
HERC1-213ENST00000561359 LRP11Q86VZ4 500 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 ZC3HC1Q86WB0 502 aaKnown RBP4.47□□□□□ -1.69
HERC1-213ENST00000561359 CNGA4Q8IV77 575 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 CCDC170Q8IYT3 715 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 TMEM86BQ8N661 226 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 STPG3Q8N7X2 389 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 POMGNT2Q8NAT1 580 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 OR1K1Q8NGR3 316 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 RFWD2Q8NHY2 731 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 GPR119Q8TDV5 335 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 UBTD2Q8WUN7 234 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 DYRK2Q92630 601 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 ZBTB9Q96C00 473 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 LRRC39Q96DD0 335 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 DNAJA3Q96EY1 480 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 CFAP36Q96G28 342 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 HES6Q96HZ4 224 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 TBX15Q96SF7 602 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 RBBP8Q99708 897 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 TRIM5Q9C035 493 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 ZNF385DQ9H6B1 395 aa4.47□□□□□ -1.69
HERC1-213ENST00000561359 ALG9Q9H6U8 611 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms