RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 SLC47A1Q96FL8 570 aa14.06□□□□□ -0.16
LMX1B-204ENST00000561065 SF3B5Q9BWJ5 86 aaKnown RBP14.06□□□□□ -0.16
LMX1B-204ENST00000561065 ESRP2Q9H6T0 727 aaKnown RBP14.06□□□□□ -0.16
LMX1B-204ENST00000561065 KAT8Q9H7Z6 458 aaKnown RBP14.06□□□□□ -0.16
LMX1B-204ENST00000561065 NANOGQ9H9S0 305 aa14.06□□□□□ -0.16
LMX1B-204ENST00000561065 TESQ9UGI8 421 aaKnown RBP14.06□□□□□ -0.16
LMX1B-204ENST00000561065 LAMP3Q9UQV4 416 aa14.06□□□□□ -0.16
LMX1B-204ENST00000561065 CR1P17927 2039 aa14.05□□□□□ -0.16
LMX1B-204ENST00000561065 LIPT2A6NK58 231 aa14.05□□□□□ -0.16
LMX1B-204ENST00000561065 OR5H1A6NKK0 313 aa14.05□□□□□ -0.16
LMX1B-204ENST00000561065 SHISA9B4DS77 424 aa14.05□□□□□ -0.16
LMX1B-204ENST00000561065 M0QX08 132 aa14.05□□□□□ -0.16
LMX1B-204ENST00000561065 PDLIM1O00151 329 aa14.05□□□□□ -0.16
LMX1B-204ENST00000561065 MRASO14807 208 aa14.05□□□□□ -0.16
LMX1B-204ENST00000561065 GGT1P19440 569 aa14.05□□□□□ -0.16
LMX1B-204ENST00000561065 RGS8P57771 180 aaPredicted RBP14.05□□□□□ -0.16
LMX1B-204ENST00000561065 SPOCK1Q08629 439 aa14.05□□□□□ -0.16
LMX1B-204ENST00000561065 SLC17A1Q14916 467 aa14.05□□□□□ -0.16
LMX1B-204ENST00000561065 MFSD13AQ14CX5 517 aa14.05□□□□□ -0.16
LMX1B-204ENST00000561065 PGGHGQ32M88 737 aa14.05□□□□□ -0.16
LMX1B-204ENST00000561065 KRTAP21-3Q3LHN1 58 aa14.05□□□□□ -0.16
LMX1B-204ENST00000561065 ZNF672Q499Z4 452 aaPredicted RBP14.05□□□□□ -0.16
LMX1B-204ENST00000561065 TIMM23BQ5SRD1 257 aa14.05□□□□□ -0.16
LMX1B-204ENST00000561065 FAM91A1Q658Y4 838 aa14.05□□□□□ -0.16
LMX1B-204ENST00000561065 CASP12Q6UXS9 341 aa14.05□□□□□ -0.16
LMX1B-204ENST00000561065 ARPINQ7Z6K5 226 aa14.05□□□□□ -0.16
LMX1B-204ENST00000561065 OR10A6Q8NH74 314 aa14.05□□□□□ -0.16
LMX1B-204ENST00000561065 FBXW5Q969U6 566 aa14.05□□□□□ -0.16
LMX1B-204ENST00000561065 ZNF317Q96PQ6 595 aaPredicted RBP14.05□□□□□ -0.16
LMX1B-204ENST00000561065 EPYCQ99645 322 aa14.05□□□□□ -0.16
LMX1B-204ENST00000561065 IKZF5Q9H5V7 419 aa14.05□□□□□ -0.16
LMX1B-204ENST00000561065 EFCAB1Q9HAE3 211 aa14.05□□□□□ -0.16
LMX1B-204ENST00000561065 SLC9A8Q9Y2E8 581 aa14.05□□□□□ -0.16
LMX1B-204ENST00000561065 MAGED1Q9Y5V3 778 aaPredicted RBP14.05□□□□□ -0.16
LMX1B-204ENST00000561065 A0A1W2PR80 420 aa14.04□□□□□ -0.16
LMX1B-204ENST00000561065 TMEM229AB2RXF0 380 aa14.04□□□□□ -0.16
LMX1B-204ENST00000561065 OVOL3O00110 214 aa14.04□□□□□ -0.16
LMX1B-204ENST00000561065 AKR7A3O95154 331 aa14.04□□□□□ -0.16
LMX1B-204ENST00000561065 P2RY4P51582 365 aa14.04□□□□□ -0.16
LMX1B-204ENST00000561065 MTPNP58546 118 aa14.04□□□□□ -0.16
LMX1B-204ENST00000561065 SLC25A3Q00325 362 aa14.04□□□□□ -0.16
LMX1B-204ENST00000561065 HOXC5Q00444 222 aa14.04□□□□□ -0.16
LMX1B-204ENST00000561065 LTBQ06643 244 aa14.04□□□□□ -0.16
LMX1B-204ENST00000561065 FAPQ12884 760 aa14.04□□□□□ -0.16
LMX1B-204ENST00000561065 CEACAM7Q14002 265 aa14.04□□□□□ -0.16
LMX1B-204ENST00000561065 ADRM1Q16186 407 aa14.04□□□□□ -0.16
LMX1B-204ENST00000561065 OTUD3Q5T2D3 398 aaPredicted RBP14.04□□□□□ -0.16
LMX1B-204ENST00000561065 SWT1Q5T5J6 900 aaKnown RBP14.04□□□□□ -0.16
LMX1B-204ENST00000561065 CLEC9AQ6UXN8 241 aa14.04□□□□□ -0.16
LMX1B-204ENST00000561065 RETREG3Q86VR2 466 aa14.04□□□□□ -0.16
LMX1B-204ENST00000561065 P2RY8Q86VZ1 359 aa14.04□□□□□ -0.16
LMX1B-204ENST00000561065 UBE2J2Q8N2K1 259 aa14.04□□□□□ -0.16
LMX1B-204ENST00000561065 TMEM99Q8N816 258 aa14.04□□□□□ -0.16
LMX1B-204ENST00000561065 MFSD8Q8NHS3 518 aa14.04□□□□□ -0.16
LMX1B-204ENST00000561065 RNF217Q8TC41 542 aa14.04□□□□□ -0.16
LMX1B-204ENST00000561065 C3orf49Q96BT1 292 aa14.04□□□□□ -0.16
LMX1B-204ENST00000561065 MUCL1Q96DR8 90 aa14.04□□□□□ -0.16
LMX1B-204ENST00000561065 CMTM5Q96DZ9 223 aa14.04□□□□□ -0.16
LMX1B-204ENST00000561065 CXorf56Q9H5V9 222 aa14.04□□□□□ -0.16
LMX1B-204ENST00000561065 SLC25A15Q9Y619 301 aa14.04□□□□□ -0.16
LMX1B-204ENST00000561065 CSPG4Q6UVK1 2322 aa14.03□□□□□ -0.16
LMX1B-204ENST00000561065 OR6C65A6NJZ3 312 aa14.03□□□□□ -0.16
LMX1B-204ENST00000561065 SMAD7O15105 426 aaKnown RBP14.03□□□□□ -0.16
LMX1B-204ENST00000561065 FMO6PO60774 539 aa14.03□□□□□ -0.16
LMX1B-204ENST00000561065 NPIPB7O75200 414 aa14.03□□□□□ -0.16
LMX1B-204ENST00000561065 MFN2O95140 757 aa14.03□□□□□ -0.16
LMX1B-204ENST00000561065 LY6G6DO95868 133 aa14.03□□□□□ -0.16
LMX1B-204ENST00000561065 HEXAP06865 529 aa14.03□□□□□ -0.16
LMX1B-204ENST00000561065 AQP1P29972 269 aa14.03□□□□□ -0.16
LMX1B-204ENST00000561065 PCGF2P35227 344 aa14.03□□□□□ -0.16
LMX1B-204ENST00000561065 CDKN1AP38936 164 aa14.03□□□□□ -0.16
LMX1B-204ENST00000561065 RPS4XP62701 263 aaKnown RBP14.03□□□□□ -0.16
LMX1B-204ENST00000561065 TGFBR3Q03167 851 aa14.03□□□□□ -0.16
LMX1B-204ENST00000561065 VEZF1Q14119 521 aa14.03□□□□□ -0.16
LMX1B-204ENST00000561065 OR7A5Q15622 319 aa14.03□□□□□ -0.16
LMX1B-204ENST00000561065 VMACQ2NL98 169 aa14.03□□□□□ -0.16
LMX1B-204ENST00000561065 ALG10BQ5I7T1 473 aa14.03□□□□□ -0.16
LMX1B-204ENST00000561065 C1QTNF12Q5T7M4 302 aa14.03□□□□□ -0.16
LMX1B-204ENST00000561065 TSPO2Q5TGU0 170 aa14.03□□□□□ -0.16
LMX1B-204ENST00000561065 C9orf135Q5VTT2 229 aa14.03□□□□□ -0.16
LMX1B-204ENST00000561065 C1orf140Q5VVS0 124 aa14.03□□□□□ -0.16
LMX1B-204ENST00000561065 SPATA21Q7Z572 469 aa14.03□□□□□ -0.16
LMX1B-204ENST00000561065 ABHD12BQ7Z5M8 362 aaPredicted RBP14.03□□□□□ -0.16
LMX1B-204ENST00000561065 SNX32Q86XE0 403 aa14.03□□□□□ -0.16
LMX1B-204ENST00000561065 ZIC4Q8N9L1 334 aa14.03□□□□□ -0.16
LMX1B-204ENST00000561065 OR52N5Q8NH56 324 aa14.03□□□□□ -0.16
LMX1B-204ENST00000561065 PROX1Q92786 737 aa14.03□□□□□ -0.16
LMX1B-204ENST00000561065 ZNF385AQ96PM9 386 aaKnown RBP14.03□□□□□ -0.16
LMX1B-204ENST00000561065 HOPXQ9BPY8 73 aaPredicted RBP14.03□□□□□ -0.16
LMX1B-204ENST00000561065 AMBRA1Q9C0C7 1298 aa14.03□□□□□ -0.16
LMX1B-204ENST00000561065 SLC7A10Q9NS82 523 aa14.03□□□□□ -0.16
LMX1B-204ENST00000561065 ASB6Q9NWX5 421 aa14.03□□□□□ -0.16
LMX1B-204ENST00000561065 TAS2R16Q9NYV7 291 aa14.03□□□□□ -0.16
LMX1B-204ENST00000561065 UPB1Q9UBR1 384 aa14.03□□□□□ -0.16
LMX1B-204ENST00000561065 BAG5Q9UL15 447 aa14.03□□□□□ -0.16
LMX1B-204ENST00000561065 RASD1Q9Y272 281 aa14.03□□□□□ -0.16
LMX1B-204ENST00000561065 DNHD1Q96M86 4753 aa14.02□□□□□ -0.16
LMX1B-204ENST00000561065 GMNCA6NCL1 334 aa14.02□□□□□ -0.17
LMX1B-204ENST00000561065 AQP7P3A6NL99 342 aa14.02□□□□□ -0.17
LMX1B-204ENST00000561065 FBP2O00757 339 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms