RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 DACH2Q96NX9 599 aa11.69□□□□□ -0.54
SNX1-211ENST00000560829 OR51V1Q9H2C8 321 aa11.69□□□□□ -0.54
SNX1-211ENST00000560829 ADGRL4Q9HBW9 690 aa11.69□□□□□ -0.54
SNX1-211ENST00000560829 SEC14L4Q9UDX3 406 aa11.69□□□□□ -0.54
SNX1-211ENST00000560829 FBXL4Q9UKA2 621 aa11.69□□□□□ -0.54
SNX1-211ENST00000560829 C21orf140B9A014 251 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 FTCDNL1E5RQL4 147 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 TNFRSF10AO00220 468 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 ZNF208O43345 1280 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 SBK2P0C263 348 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 CLUP10909 449 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 SSR4P51571 173 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 CTXN1P60606 82 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 SLC35D3Q5M8T2 416 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 C1QL3Q5VWW1 255 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 GPR139Q6DWJ6 353 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 POMZP3Q6PJE2 187 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 B3GLCTQ6Y288 498 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 USP43Q70EL4 1123 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 LHFPL3Q86UP9 236 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 RPS19BP1Q86WX3 136 aaKnown RBP11.68□□□□□ -0.54
SNX1-211ENST00000560829 KLHL36Q8N4N3 616 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 FADS6Q8N9I5 356 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 OR2M3Q8NG83 312 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 OR9Q1Q8NGQ5 310 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 MRGPRX4Q96LA9 322 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 GPR87Q9BY21 358 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 DCSTAMPQ9H295 470 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 SH2D2AQ9NP31 389 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 KLHL1Q9NR64 748 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 TAS2R5Q9NYW4 299 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 NCDNQ9UBB6 729 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 CAB39Q9Y376 341 aaPredicted RBP11.68□□□□□ -0.54
SNX1-211ENST00000560829 HEATR5AQ86XA9 2040 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 TEX13CA0A0J9YWL9 993 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 C12orf71A8MTZ7 269 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 FZD7O75084 574 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 DXOO77932 396 aaKnown RBP11.68□□□□□ -0.54
SNX1-211ENST00000560829 AHSA1O95433 338 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 PSMA1P25786 263 aaKnown RBP11.68□□□□□ -0.54
SNX1-211ENST00000560829 OTX2P32243 289 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 SLC25A1P53007 311 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 RPS7P62081 194 aaKnown RBP11.68□□□□□ -0.54
SNX1-211ENST00000560829 BDH1Q02338 343 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 LGALS3BPQ08380 585 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 DNASE1L3Q13609 305 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 DGUOKQ16854 277 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 PLPPR5Q32ZL2 321 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 LCN1P1Q5VSP4 162 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 H3F3CQ6NXT2 135 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 ARSKQ6UWY0 536 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 POMGNT2Q8NAT1 580 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 KBTBD8Q8NFY9 601 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 NLGN4YQ8NFZ3 816 aaPredicted RBP11.68□□□□□ -0.54
SNX1-211ENST00000560829 OR5J2Q8NH18 312 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 PAQR8Q8TEZ7 354 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 ASB15Q8WXK1 588 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 Q96M85 177 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 NMNAT3Q96T66 252 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 TIMP4Q99727 224 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 CHCHD6Q9BRQ6 235 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 ANGPTL4Q9BY76 406 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 CDCP1Q9H5V8 836 aa11.68□□□□□ -0.54
SNX1-211ENST00000560829 OR6C68A6NDL8 312 aa11.67□□□□□ -0.54
SNX1-211ENST00000560829 FOXD2O60548 495 aaPredicted RBP11.67□□□□□ -0.54
SNX1-211ENST00000560829 GPX5O75715 221 aa11.67□□□□□ -0.54
SNX1-211ENST00000560829 INHBBP09529 407 aa11.67□□□□□ -0.54
SNX1-211ENST00000560829 TGFBR1P36897 503 aa11.67□□□□□ -0.54
SNX1-211ENST00000560829 CD79BP40259 229 aa11.67□□□□□ -0.54
SNX1-211ENST00000560829 CRYBB2P43320 205 aa11.67□□□□□ -0.54
SNX1-211ENST00000560829 DIO1P49895 249 aa11.67□□□□□ -0.54
SNX1-211ENST00000560829 ZNF41P51814 821 aaPredicted RBP11.67□□□□□ -0.54
SNX1-211ENST00000560829 ACTC1P68032 377 aa11.67□□□□□ -0.54
SNX1-211ENST00000560829 ACTA1P68133 377 aa11.67□□□□□ -0.54
SNX1-211ENST00000560829 FOXF1Q12946 379 aa11.67□□□□□ -0.54
SNX1-211ENST00000560829 GALEQ14376 348 aa11.67□□□□□ -0.54
SNX1-211ENST00000560829 MFSD13AQ14CX5 517 aa11.67□□□□□ -0.54
SNX1-211ENST00000560829 MOGQ16653 247 aa11.67□□□□□ -0.54
SNX1-211ENST00000560829 ZNF322Q6U7Q0 402 aaPredicted RBP11.67□□□□□ -0.54
SNX1-211ENST00000560829 IL20RBQ6UXL0 311 aa11.67□□□□□ -0.54
SNX1-211ENST00000560829 TMEM99Q8N816 258 aa11.67□□□□□ -0.54
SNX1-211ENST00000560829 LSM14AQ8ND56 463 aaKnown RBP11.67□□□□□ -0.54
SNX1-211ENST00000560829 PRSS33Q8NF86 280 aa11.67□□□□□ -0.54
SNX1-211ENST00000560829 GATAD2BQ8WXI9 593 aa11.67□□□□□ -0.54
SNX1-211ENST00000560829 RASD2Q96D21 266 aa11.67□□□□□ -0.54
SNX1-211ENST00000560829 TSPAN32Q96QS1 320 aa11.67□□□□□ -0.54
SNX1-211ENST00000560829 NPAS1Q99742 590 aa11.67□□□□□ -0.54
SNX1-211ENST00000560829 CENPOQ9BU64 300 aa11.67□□□□□ -0.54
SNX1-211ENST00000560829 ASPNQ9BXN1 380 aa11.67□□□□□ -0.54
SNX1-211ENST00000560829 POTEKPQ9BYX7 375 aa11.67□□□□□ -0.54
SNX1-211ENST00000560829 SLIRPQ9GZT3 109 aaKnown RBP11.67□□□□□ -0.54
SNX1-211ENST00000560829 MRPL39Q9NYK5 338 aaKnown RBP11.67□□□□□ -0.54
SNX1-211ENST00000560829 STUB1Q9UNE7 303 aa11.67□□□□□ -0.54
SNX1-211ENST00000560829 SPIN1Q9Y657 262 aaPredicted RBP11.67□□□□□ -0.54
SNX1-211ENST00000560829 WDR87Q6ZQQ6 2873 aa11.67□□□□□ -0.54
SNX1-211ENST00000560829 ZNF318Q5VUA4 2279 aa11.67□□□□□ -0.54
SNX1-211ENST00000560829 LOC100506127A0A0U1RQW1 187 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 AKAP8O43823 692 aaKnown RBP11.66□□□□□ -0.54
SNX1-211ENST00000560829 F13BP05160 661 aa11.66□□□□□ -0.54
SNX1-211ENST00000560829 SERPINA7P05543 415 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms