RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 A0A0G2JK05 382 aa15.38■□□□□ 0.05
TSPAN3-208ENST00000560514 RNF103-CHMP3A0A140T963 221 aa15.38■□□□□ 0.05
TSPAN3-208ENST00000560514 TMEM129A0AVI4 362 aa15.38■□□□□ 0.05
TSPAN3-208ENST00000560514 M0R233 179 aa15.38■□□□□ 0.05
TSPAN3-208ENST00000560514 PIP5K1BO14986 540 aa15.38■□□□□ 0.05
TSPAN3-208ENST00000560514 BCAS1O75363 584 aaPredicted RBP15.38■□□□□ 0.05
TSPAN3-208ENST00000560514 IGKV3-15P01624 115 aa15.38■□□□□ 0.05
TSPAN3-208ENST00000560514 CHRNGP07510 517 aa15.38■□□□□ 0.05
TSPAN3-208ENST00000560514 GAAP10253 952 aa15.38■□□□□ 0.05
TSPAN3-208ENST00000560514 UQCRBP14927 111 aa15.38■□□□□ 0.05
TSPAN3-208ENST00000560514 ANPEPP15144 967 aa15.38■□□□□ 0.05
TSPAN3-208ENST00000560514 ACHEP22303 614 aa15.38■□□□□ 0.05
TSPAN3-208ENST00000560514 TACR3P29371 465 aa15.38■□□□□ 0.05
TSPAN3-208ENST00000560514 SH3BGRP55822 239 aaPredicted RBP15.38■□□□□ 0.05
TSPAN3-208ENST00000560514 IFFO1Q0D2I5 559 aa15.38■□□□□ 0.05
TSPAN3-208ENST00000560514 FOXL1Q12952 345 aa15.38■□□□□ 0.05
TSPAN3-208ENST00000560514 NPRL3Q12980 569 aa15.38■□□□□ 0.05
TSPAN3-208ENST00000560514 SNTB2Q13425 540 aaKnown RBP15.38■□□□□ 0.05
TSPAN3-208ENST00000560514 CEACAM7Q14002 265 aa15.38■□□□□ 0.05
TSPAN3-208ENST00000560514 DAG1Q14118 895 aa15.38■□□□□ 0.05
TSPAN3-208ENST00000560514 ATP6AP1LQ52LC2 224 aa15.38■□□□□ 0.05
TSPAN3-208ENST00000560514 NIPAL3Q6P499 406 aa15.38■□□□□ 0.05
TSPAN3-208ENST00000560514 ZIC4Q8N9L1 334 aa15.38■□□□□ 0.05
TSPAN3-208ENST00000560514 IL17RDQ8NFM7 739 aa15.38■□□□□ 0.05
TSPAN3-208ENST00000560514 XAGE5Q8WWM1 108 aa15.38■□□□□ 0.05
TSPAN3-208ENST00000560514 MRPL24Q96A35 216 aaKnown RBP15.38■□□□□ 0.05
TSPAN3-208ENST00000560514 COQ8BQ96D53 544 aa15.38■□□□□ 0.05
TSPAN3-208ENST00000560514 TMEM109Q9BVC6 243 aa15.38■□□□□ 0.05
TSPAN3-208ENST00000560514 TAPBPLQ9BX59 468 aa15.38■□□□□ 0.05
TSPAN3-208ENST00000560514 OR51I1Q9H343 314 aa15.38■□□□□ 0.05
TSPAN3-208ENST00000560514 SEC61A2Q9H9S3 476 aa15.38■□□□□ 0.05
TSPAN3-208ENST00000560514 SLC52A3Q9NQ40 469 aa15.38■□□□□ 0.05
TSPAN3-208ENST00000560514 POLE3Q9NRF9 147 aa15.38■□□□□ 0.05
TSPAN3-208ENST00000560514 REV1Q9UBZ9 1251 aa15.38■□□□□ 0.05
TSPAN3-208ENST00000560514 AQP7P3A6NL99 342 aa15.37■□□□□ 0.05
TSPAN3-208ENST00000560514 SYNGR3O43761 229 aa15.37■□□□□ 0.05
TSPAN3-208ENST00000560514 PEX11AO75192 247 aa15.37■□□□□ 0.05
TSPAN3-208ENST00000560514 CELA3BP08861 270 aa15.37■□□□□ 0.05
TSPAN3-208ENST00000560514 CBR1P16152 277 aa15.37■□□□□ 0.05
TSPAN3-208ENST00000560514 PRPS1L1P21108 318 aa15.37■□□□□ 0.05
TSPAN3-208ENST00000560514 SELENOPP49908 381 aa15.37■□□□□ 0.05
TSPAN3-208ENST00000560514 POU3F1Q03052 451 aaPredicted RBP15.37■□□□□ 0.05
TSPAN3-208ENST00000560514 XKR7Q5GH72 579 aa15.37■□□□□ 0.05
TSPAN3-208ENST00000560514 TYW3Q6IPR3 259 aaKnown RBP15.37■□□□□ 0.05
TSPAN3-208ENST00000560514 KRT80Q6KB66 452 aa15.37■□□□□ 0.05
TSPAN3-208ENST00000560514 TCP10LQ8TDR4 215 aa15.37■□□□□ 0.05
TSPAN3-208ENST00000560514 RDH5Q92781 318 aa15.37■□□□□ 0.05
TSPAN3-208ENST00000560514 C1orf50Q9BV19 199 aa15.37■□□□□ 0.05
TSPAN3-208ENST00000560514 CRLF2Q9HC73 371 aa15.37■□□□□ 0.05
TSPAN3-208ENST00000560514 DDX28Q9NUL7 540 aaKnown RBP15.37■□□□□ 0.05
TSPAN3-208ENST00000560514 ADPRHL2Q9NX46 363 aa15.37■□□□□ 0.05
TSPAN3-208ENST00000560514 LOC105371242A0A075B767 164 aa15.36■□□□□ 0.05
TSPAN3-208ENST00000560514 IGHV2OR16-5A0A0B4J2B6 119 aa15.36■□□□□ 0.05
TSPAN3-208ENST00000560514 ZC3H12DA2A288 527 aaKnown RBP15.36■□□□□ 0.05
TSPAN3-208ENST00000560514 PPIHO43447 177 aaKnown RBP15.36■□□□□ 0.05
TSPAN3-208ENST00000560514 GUSBP08236 651 aa15.36■□□□□ 0.05
TSPAN3-208ENST00000560514 OR12D1P0DN82 309 aa15.36■□□□□ 0.05
TSPAN3-208ENST00000560514 CXCR1P25024 350 aa15.36■□□□□ 0.05
TSPAN3-208ENST00000560514 ARR3P36575 388 aa15.36■□□□□ 0.05
TSPAN3-208ENST00000560514 CAPZA2P47755 286 aa15.36■□□□□ 0.05
TSPAN3-208ENST00000560514 TMEM33P57088 247 aa15.36■□□□□ 0.05
TSPAN3-208ENST00000560514 ROR2Q01974 943 aaKnown RBP15.36■□□□□ 0.05
TSPAN3-208ENST00000560514 SMU1Q2TAY7 513 aa15.36■□□□□ 0.05
TSPAN3-208ENST00000560514 PGS1Q32NB8 556 aa15.36■□□□□ 0.05
TSPAN3-208ENST00000560514 GPAT3Q53EU6 434 aa15.36■□□□□ 0.05
TSPAN3-208ENST00000560514 ELFN2Q5R3F8 820 aa15.36■□□□□ 0.05
TSPAN3-208ENST00000560514 C6orf136Q5SQH8 315 aa15.36■□□□□ 0.05
TSPAN3-208ENST00000560514 HMGN2P46Q86SG4 172 aa15.36■□□□□ 0.05
TSPAN3-208ENST00000560514 CLEC4FQ8N1N0 589 aa15.36■□□□□ 0.05
TSPAN3-208ENST00000560514 KRTCAP2Q8N6L1 136 aa15.36■□□□□ 0.05
TSPAN3-208ENST00000560514 ROPN1LQ96C74 230 aa15.36■□□□□ 0.05
TSPAN3-208ENST00000560514 ZIM3Q96PE6 472 aa15.36■□□□□ 0.05
TSPAN3-208ENST00000560514 SLC17A7Q9P2U7 560 aa15.36■□□□□ 0.05
TSPAN3-208ENST00000560514 GIMAP2Q9UG22 337 aa15.36■□□□□ 0.05
TSPAN3-208ENST00000560514 NOX1Q9Y5S8 564 aa15.36■□□□□ 0.05
TSPAN3-208ENST00000560514 PKD1L1Q8TDX9 2849 aa15.35■□□□□ 0.05
TSPAN3-208ENST00000560514 LIPT2A6NK58 231 aa15.35■□□□□ 0.05
TSPAN3-208ENST00000560514 AP3D1O14617 1153 aa15.35■□□□□ 0.05
TSPAN3-208ENST00000560514 VAMP5O95183 116 aa15.35■□□□□ 0.05
TSPAN3-208ENST00000560514 BPGMP07738 259 aa15.35■□□□□ 0.05
TSPAN3-208ENST00000560514 TCN1P20061 433 aaPredicted RBP15.35■□□□□ 0.05
TSPAN3-208ENST00000560514 MYBPC1Q00872 1141 aa15.35■□□□□ 0.05
TSPAN3-208ENST00000560514 MAD2L1Q13257 205 aaPredicted RBP15.35■□□□□ 0.05
TSPAN3-208ENST00000560514 PDCD2Q16342 344 aaPredicted RBP15.35■□□□□ 0.05
TSPAN3-208ENST00000560514 MIDNQ504T8 468 aa15.35■□□□□ 0.05
TSPAN3-208ENST00000560514 IL23RQ5VWK5 629 aa15.35■□□□□ 0.05
TSPAN3-208ENST00000560514 WDR93Q6P2C0 686 aa15.35■□□□□ 0.05
TSPAN3-208ENST00000560514 TNFAIP8L2Q6P589 184 aaPredicted RBP15.35■□□□□ 0.05
TSPAN3-208ENST00000560514 TREML4Q6UXN2 200 aa15.35■□□□□ 0.05
TSPAN3-208ENST00000560514 CREB3L2Q70SY1 520 aa15.35■□□□□ 0.05
TSPAN3-208ENST00000560514 CARM1Q86X55 608 aa15.35■□□□□ 0.05
TSPAN3-208ENST00000560514 FNDC5Q8NAU1 212 aa15.35■□□□□ 0.05
TSPAN3-208ENST00000560514 SLC6A7Q99884 636 aa15.35■□□□□ 0.05
TSPAN3-208ENST00000560514 ZNF416Q9BWM5 594 aa15.35■□□□□ 0.05
TSPAN3-208ENST00000560514 ZDHHC2Q9UIJ5 367 aa15.35■□□□□ 0.05
TSPAN3-208ENST00000560514 A0A0G2JMP0 313 aa15.34■□□□□ 0.05
TSPAN3-208ENST00000560514 A0A0X1KG70 313 aa15.34■□□□□ 0.05
TSPAN3-208ENST00000560514 CLDN24A6NM45 220 aa15.34■□□□□ 0.05
TSPAN3-208ENST00000560514 TMEM233B4DJY2 109 aa15.34■□□□□ 0.05
TSPAN3-208ENST00000560514 SPAG7O75391 227 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms