RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 EFCAB9A8MZ26 197 aa10.6□□□□□ -0.71
LDLR-212ENST00000560467 H0YAE9 185 aa10.6□□□□□ -0.71
LDLR-212ENST00000560467 KPNA4O00629 521 aaPredicted RBP10.6□□□□□ -0.71
LDLR-212ENST00000560467 OIP5O43482 229 aa10.6□□□□□ -0.71
LDLR-212ENST00000560467 TRIM3O75382 744 aaPredicted RBP10.6□□□□□ -0.71
LDLR-212ENST00000560467 CTAG2O75638 210 aa10.6□□□□□ -0.71
LDLR-212ENST00000560467 GLSO94925 669 aaPredicted RBP10.6□□□□□ -0.71
LDLR-212ENST00000560467 RCBTB2O95199 551 aa10.6□□□□□ -0.71
LDLR-212ENST00000560467 OR6A2O95222 327 aa10.6□□□□□ -0.71
LDLR-212ENST00000560467 GASTP01350 101 aa10.6□□□□□ -0.71
LDLR-212ENST00000560467 CELA3AP09093 270 aa10.6□□□□□ -0.71
LDLR-212ENST00000560467 POU2F1P14859 743 aa10.6□□□□□ -0.71
LDLR-212ENST00000560467 ZNF26P17031 533 aaPredicted RBP10.6□□□□□ -0.71
LDLR-212ENST00000560467 PRKCAP17252 672 aa10.6□□□□□ -0.71
LDLR-212ENST00000560467 BMP7P18075 431 aa10.6□□□□□ -0.71
LDLR-212ENST00000560467 GDF1P27539 372 aa10.6□□□□□ -0.71
LDLR-212ENST00000560467 PTGDSP41222 190 aa10.6□□□□□ -0.71
LDLR-212ENST00000560467 DNASE1L1P49184 302 aa10.6□□□□□ -0.71
LDLR-212ENST00000560467 CLK1P49759 484 aaKnown RBP10.6□□□□□ -0.71
LDLR-212ENST00000560467 PPP2R2BQ00005 443 aa10.6□□□□□ -0.71
LDLR-212ENST00000560467 MFSD13AQ14CX5 517 aa10.6□□□□□ -0.71
LDLR-212ENST00000560467 LAPTM4AQ15012 233 aa10.6□□□□□ -0.71
LDLR-212ENST00000560467 RAET1LQ5VY80 246 aa10.6□□□□□ -0.71
LDLR-212ENST00000560467 C1orf94Q6P1W5 598 aa10.6□□□□□ -0.71
LDLR-212ENST00000560467 FAHD1Q6P587 224 aa10.6□□□□□ -0.71
LDLR-212ENST00000560467 GALNT5Q7Z7M9 940 aa10.6□□□□□ -0.71
LDLR-212ENST00000560467 ATG4DQ86TL0 474 aaPredicted RBP10.6□□□□□ -0.71
LDLR-212ENST00000560467 NKAIN4Q8IVV8 208 aa10.6□□□□□ -0.71
LDLR-212ENST00000560467 FADS6Q8N9I5 356 aa10.6□□□□□ -0.71
LDLR-212ENST00000560467 WDSUB1Q8N9V3 476 aa10.6□□□□□ -0.71
LDLR-212ENST00000560467 STK35Q8TDR2 534 aa10.6□□□□□ -0.71
LDLR-212ENST00000560467 TMEM255BQ8WV15 326 aa10.6□□□□□ -0.71
LDLR-212ENST00000560467 OSTF1Q92882 214 aa10.6□□□□□ -0.71
LDLR-212ENST00000560467 C3orf49Q96BT1 292 aa10.6□□□□□ -0.71
LDLR-212ENST00000560467 SGTBQ96EQ0 304 aa10.6□□□□□ -0.71
LDLR-212ENST00000560467 SLC29A1Q99808 456 aa10.6□□□□□ -0.71
LDLR-212ENST00000560467 APOL4Q9BPW4 351 aa10.6□□□□□ -0.71
LDLR-212ENST00000560467 TTYH2Q9BSA4 534 aa10.6□□□□□ -0.71
LDLR-212ENST00000560467 TAPBPLQ9BX59 468 aa10.6□□□□□ -0.71
LDLR-212ENST00000560467 DGCR6LQ9BY27 220 aa10.6□□□□□ -0.71
LDLR-212ENST00000560467 RTN4RQ9BZR6 473 aa10.6□□□□□ -0.71
LDLR-212ENST00000560467 RIBC2Q9H4K1 309 aa10.6□□□□□ -0.71
LDLR-212ENST00000560467 VNN3Q9NY84 501 aa10.6□□□□□ -0.71
LDLR-212ENST00000560467 Q9UFV3 132 aa10.6□□□□□ -0.71
LDLR-212ENST00000560467 ST6GALNAC2Q9UJ37 374 aa10.6□□□□□ -0.71
LDLR-212ENST00000560467 RAB26Q9ULW5 256 aa10.6□□□□□ -0.71
LDLR-212ENST00000560467 PLEKHA6Q9Y2H5 1048 aa10.6□□□□□ -0.71
LDLR-212ENST00000560467 MRPS18CQ9Y3D5 142 aaKnown RBP10.6□□□□□ -0.71
LDLR-212ENST00000560467 FLNAP21333 2647 aaKnown RBP10.6□□□□□ -0.71
LDLR-212ENST00000560467 TRAV36DV7A0A075B6V5 113 aa10.59□□□□□ -0.71
LDLR-212ENST00000560467 FAM221AA4D161 298 aa10.59□□□□□ -0.71
LDLR-212ENST00000560467 UNC119BA6NIH7 251 aa10.59□□□□□ -0.71
LDLR-212ENST00000560467 FIGNL2A6NMB9 653 aa10.59□□□□□ -0.71
LDLR-212ENST00000560467 ZNF208O43345 1280 aa10.59□□□□□ -0.71
LDLR-212ENST00000560467 SUSD5O60279 629 aa10.59□□□□□ -0.71
LDLR-212ENST00000560467 HCN1O60741 890 aa10.59□□□□□ -0.71
LDLR-212ENST00000560467 AHSA1O95433 338 aa10.59□□□□□ -0.71
LDLR-212ENST00000560467 IGF2P01344 180 aa10.59□□□□□ -0.71
LDLR-212ENST00000560467 IGHG3P01860 377 aa10.59□□□□□ -0.71
LDLR-212ENST00000560467 ZNF17P17021 662 aa10.59□□□□□ -0.71
LDLR-212ENST00000560467 FPR3P25089 353 aa10.59□□□□□ -0.71
LDLR-212ENST00000560467 POU1F1P28069 291 aa10.59□□□□□ -0.71
LDLR-212ENST00000560467 SRD5A2P31213 254 aa10.59□□□□□ -0.71
LDLR-212ENST00000560467 MAGEA5P43359 124 aa10.59□□□□□ -0.71
LDLR-212ENST00000560467 SLC9A3P48764 834 aa10.59□□□□□ -0.71
LDLR-212ENST00000560467 DAPP51397 102 aa10.59□□□□□ -0.71
LDLR-212ENST00000560467 AQP4P55087 323 aa10.59□□□□□ -0.71
LDLR-212ENST00000560467 ESRRGP62508 458 aa10.59□□□□□ -0.71
LDLR-212ENST00000560467 PRKCDQ05655 676 aa10.59□□□□□ -0.71
LDLR-212ENST00000560467 CRYZQ08257 329 aaKnown RBP10.59□□□□□ -0.71
LDLR-212ENST00000560467 TSPAN31Q12999 210 aa10.59□□□□□ -0.71
LDLR-212ENST00000560467 MED21Q13503 144 aa10.59□□□□□ -0.71
LDLR-212ENST00000560467 SEC23BQ15437 767 aa10.59□□□□□ -0.71
LDLR-212ENST00000560467 PLPPR5Q32ZL2 321 aa10.59□□□□□ -0.71
LDLR-212ENST00000560467 ANKDD1AQ495B1 522 aa10.59□□□□□ -0.71
LDLR-212ENST00000560467 PDSS1Q5T2R2 415 aa10.59□□□□□ -0.71
LDLR-212ENST00000560467 KDM4DQ6B0I6 523 aa10.59□□□□□ -0.71
LDLR-212ENST00000560467 PGBD2Q6P3X8 592 aa10.59□□□□□ -0.71
LDLR-212ENST00000560467 TBPL2Q6SJ96 375 aa10.59□□□□□ -0.71
LDLR-212ENST00000560467 ARSKQ6UWY0 536 aa10.59□□□□□ -0.71
LDLR-212ENST00000560467 B3GNT6Q6ZMB0 384 aa10.59□□□□□ -0.71
LDLR-212ENST00000560467 TRILQ7L0X0 811 aa10.59□□□□□ -0.71
LDLR-212ENST00000560467 TMEM179BQ7Z7N9 219 aa10.59□□□□□ -0.71
LDLR-212ENST00000560467 OAFQ86UD1 273 aa10.59□□□□□ -0.71
LDLR-212ENST00000560467 EPHX4Q8IUS5 362 aa10.59□□□□□ -0.71
LDLR-212ENST00000560467 HS3ST5Q8IZT8 346 aa10.59□□□□□ -0.71
LDLR-212ENST00000560467 PARP8Q8N3A8 854 aa10.59□□□□□ -0.71
LDLR-212ENST00000560467 TMEM251Q8N6I4 163 aa10.59□□□□□ -0.71
LDLR-212ENST00000560467 SETD9Q8NE22 299 aa10.59□□□□□ -0.71
LDLR-212ENST00000560467 ATP6V1C2Q8NEY4 427 aa10.59□□□□□ -0.71
LDLR-212ENST00000560467 OR9Q2Q8NGE9 314 aa10.59□□□□□ -0.71
LDLR-212ENST00000560467 OR52L1Q8NGH7 329 aa10.59□□□□□ -0.71
LDLR-212ENST00000560467 TEX47Q8TBZ9 253 aa10.59□□□□□ -0.71
LDLR-212ENST00000560467 NINJ1Q92982 152 aa10.59□□□□□ -0.71
LDLR-212ENST00000560467 ASPNQ9BXN1 380 aa10.59□□□□□ -0.71
LDLR-212ENST00000560467 POLDIP3Q9BY77 421 aaKnown RBP10.59□□□□□ -0.71
LDLR-212ENST00000560467 DLL4Q9NR61 685 aa10.59□□□□□ -0.71
LDLR-212ENST00000560467 MAN2C1Q9NTJ4 1040 aa10.59□□□□□ -0.71
LDLR-212ENST00000560467 CHRNA9Q9UGM1 479 aa10.59□□□□□ -0.71
LDLR-212ENST00000560467 OSGIN1Q9UJX0 560 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms