RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 OR2T1O43869 369 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 SULT1C4O75897 302 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 MT-ATP6P00846 226 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 TFPIP10646 304 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 ZNF17P17021 662 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 SLC6A6P31641 620 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 TNFSF10P50591 281 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 RPS4XP62701 263 aaKnown RBP10.12□□□□□ -0.79
USP3-218ENST00000560202 SELENBP1Q13228 472 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 C6orf141Q5SZD1 244 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 RAET1LQ5VY80 246 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 LAIR2Q6ISS4 152 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 C16orf87Q6PH81 154 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 THSD4Q6ZMP0 1018 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 PTCHD4Q6ZW05 846 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 CLVS1Q8IUQ0 354 aaPredicted RBP10.12□□□□□ -0.79
USP3-218ENST00000560202 CENPSQ8N2Z9 138 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 SLC43A2Q8N370 569 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 OR6S1Q8NH40 331 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 CNIH3Q8TBE1 160 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 SLC39A7Q92504 469 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 RELTQ969Z4 430 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 C12orf43Q96C57 262 aaKnown RBP10.12□□□□□ -0.79
USP3-218ENST00000560202 SLC25A36Q96CQ1 311 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 DNAJA3Q96EY1 480 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 SCMH1Q96GD3 660 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 ARL5BQ96KC2 179 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 SMAD5Q99717 465 aaKnown RBP10.12□□□□□ -0.79
USP3-218ENST00000560202 NEURL2Q9BR09 285 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 TEX12Q9BXU0 123 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 POTEKPQ9BYX7 375 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 TVP23BQ9NYZ1 205 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 MRPS18CQ9Y3D5 142 aaKnown RBP10.12□□□□□ -0.79
USP3-218ENST00000560202 MED13Q9UHV7 2174 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 OR2M5A3KFT3 312 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 FTCDNL1E5RQL4 147 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 BLOC1S5-TXNDC5H3BN57 136 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 BHLHE40O14503 412 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 MPZL2O60487 215 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 WBP4O75554 376 aaKnown RBP10.12□□□□□ -0.79
USP3-218ENST00000560202 NDUFB2O95178 105 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 HIST1H2ABP04908 130 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 PEPDP12955 493 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 GABRB1P18505 474 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 FKBP2P26885 142 aaKnown RBP10.12□□□□□ -0.79
USP3-218ENST00000560202 GDF1P27539 372 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 IDUAP35475 653 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 PCYT1AP49585 367 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 TMBIM6P55061 237 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 PRPS1P60891 318 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 TLE3Q04726 772 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 SNAPC1Q16533 368 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 PGGHGQ32M88 737 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 ANKDD1AQ495B1 522 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 GXYLT1Q4G148 440 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 SYT14P1Q58G82 188 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 ZNF766Q5HY98 468 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 HIST3H2AQ7L7L0 130 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 MAMDC2Q7Z304 686 aaPredicted RBP10.12□□□□□ -0.79
USP3-218ENST00000560202 YRDCQ86U90 279 aaKnown RBP10.12□□□□□ -0.79
USP3-218ENST00000560202 TMEM178AQ8NBL3 297 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 OR8J1Q8NGP2 316 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 OR14L1PQ8NHC6 308 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 MFSD8Q8NHS3 518 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 TBC1D15Q8TC07 691 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 SLC25A43Q8WUT9 341 aaPredicted RBP10.12□□□□□ -0.79
USP3-218ENST00000560202 APH1BQ8WW43 257 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 HDAC2Q92769 488 aaKnown RBP10.12□□□□□ -0.79
USP3-218ENST00000560202 HIST1H2ACQ93077 130 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 SLC38A2Q96QD8 506 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 PIGQQ9BRB3 760 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 IFT27Q9BW83 186 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 POLDIP3Q9BY77 421 aaKnown RBP10.12□□□□□ -0.79
USP3-218ENST00000560202 PRRG3Q9BZD7 231 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 ADNPQ9H2P0 1102 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 TMEM185BQ9H7F4 350 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 B4GALT7Q9UBV7 327 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 ERGIC3Q9Y282 383 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 HIF3AQ9Y2N7 669 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 CSAG2Q9Y5P2 127 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 PCNX3Q9H6A9 2034 aa10.11□□□□□ -0.79
USP3-218ENST00000560202 K7ENP7 123 aa10.11□□□□□ -0.79
USP3-218ENST00000560202 TRAPPC6AO75865 159 aa10.11□□□□□ -0.79
USP3-218ENST00000560202 OPN1LWP04000 364 aa10.11□□□□□ -0.79
USP3-218ENST00000560202 HMGN1P05114 100 aa10.11□□□□□ -0.79
USP3-218ENST00000560202 TSPAN19P0C672 248 aa10.11□□□□□ -0.79
USP3-218ENST00000560202 GRPRP30550 384 aa10.11□□□□□ -0.79
USP3-218ENST00000560202 UQCRC1P31930 480 aa10.11□□□□□ -0.79
USP3-218ENST00000560202 GRK5P34947 590 aa10.11□□□□□ -0.79
USP3-218ENST00000560202 RFC3P40938 356 aa10.11□□□□□ -0.79
USP3-218ENST00000560202 AQP2P41181 271 aa10.11□□□□□ -0.79
USP3-218ENST00000560202 CLK1P49759 484 aaKnown RBP10.11□□□□□ -0.79
USP3-218ENST00000560202 MEOX1P50221 254 aa10.11□□□□□ -0.79
USP3-218ENST00000560202 B3GALT5-AS1P59052 145 aa10.11□□□□□ -0.79
USP3-218ENST00000560202 SNRPGP62308 76 aaKnown RBP10.11□□□□□ -0.79
USP3-218ENST00000560202 EFNB1P98172 346 aa10.11□□□□□ -0.79
USP3-218ENST00000560202 PLGLB1Q02325 96 aa10.11□□□□□ -0.79
USP3-218ENST00000560202 RBM48Q5RL73 367 aaKnown RBP10.11□□□□□ -0.79
USP3-218ENST00000560202 SLC6A19Q695T7 634 aa10.11□□□□□ -0.79
USP3-218ENST00000560202 THOC7Q6I9Y2 204 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms