RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 LAMP1P11279 417 aa11.01□□□□□ -0.65
RABGGTA-213ENST00000560127 ACHEP22303 614 aa11.01□□□□□ -0.65
RABGGTA-213ENST00000560127 ZFP36P26651 326 aaKnown RBP11.01□□□□□ -0.65
RABGGTA-213ENST00000560127 RYKP34925 604 aa11.01□□□□□ -0.65
RABGGTA-213ENST00000560127 NAA20P61599 178 aa11.01□□□□□ -0.65
RABGGTA-213ENST00000560127 MYBPC1Q00872 1141 aa11.01□□□□□ -0.65
RABGGTA-213ENST00000560127 MAPK14Q16539 360 aa11.01□□□□□ -0.65
RABGGTA-213ENST00000560127 SLC9B1Q4ZJI4 515 aa11.01□□□□□ -0.65
RABGGTA-213ENST00000560127 RFTN2Q52LD8 501 aaPredicted RBP11.01□□□□□ -0.65
RABGGTA-213ENST00000560127 TTMPQ5BVD1 217 aa11.01□□□□□ -0.65
RABGGTA-213ENST00000560127 XKR7Q5GH72 579 aa11.01□□□□□ -0.65
RABGGTA-213ENST00000560127 PAQR6Q6TCH4 344 aa11.01□□□□□ -0.65
RABGGTA-213ENST00000560127 ABHD12BQ7Z5M8 362 aaPredicted RBP11.01□□□□□ -0.65
RABGGTA-213ENST00000560127 OR7A2PQ8NGA2 310 aa11.01□□□□□ -0.65
RABGGTA-213ENST00000560127 MAGEE2Q8TD90 523 aaPredicted RBP11.01□□□□□ -0.65
RABGGTA-213ENST00000560127 MTERF3Q96E29 417 aa11.01□□□□□ -0.65
RABGGTA-213ENST00000560127 C3orf30Q96M34 536 aa11.01□□□□□ -0.65
RABGGTA-213ENST00000560127 ALKBH3Q96Q83 286 aaPredicted RBP11.01□□□□□ -0.65
RABGGTA-213ENST00000560127 C1QTNF5Q9BXJ0 243 aa11.01□□□□□ -0.65
RABGGTA-213ENST00000560127 SERHL2Q9H4I8 314 aa11.01□□□□□ -0.65
RABGGTA-213ENST00000560127 ZNF275Q9NSD4 429 aaPredicted RBP11.01□□□□□ -0.65
RABGGTA-213ENST00000560127 DDX28Q9NUL7 540 aaKnown RBP11.01□□□□□ -0.65
RABGGTA-213ENST00000560127 REV1Q9UBZ9 1251 aa11.01□□□□□ -0.65
RABGGTA-213ENST00000560127 ATP6V1HQ9UI12 483 aa11.01□□□□□ -0.65
RABGGTA-213ENST00000560127 ZDHHC2Q9UIJ5 367 aa11.01□□□□□ -0.65
RABGGTA-213ENST00000560127 MKLN1Q9UL63 735 aa11.01□□□□□ -0.65
RABGGTA-213ENST00000560127 FIS1Q9Y3D6 152 aa11.01□□□□□ -0.65
RABGGTA-213ENST00000560127 TMED7-TICAM2A0A0A6YYA0 188 aa11□□□□□ -0.65
RABGGTA-213ENST00000560127 TMEM120BA0PK00 339 aa11□□□□□ -0.65
RABGGTA-213ENST00000560127 TMEM72A0PK05 275 aa11□□□□□ -0.65
RABGGTA-213ENST00000560127 ZC3H12DA2A288 527 aaKnown RBP11□□□□□ -0.65
RABGGTA-213ENST00000560127 WDR91A4D1P6 747 aa11□□□□□ -0.65
RABGGTA-213ENST00000560127 ZNF587BE7ETH6 402 aa11□□□□□ -0.65
RABGGTA-213ENST00000560127 SLC28A1O00337 649 aa11□□□□□ -0.65
RABGGTA-213ENST00000560127 PIP5K1BO14986 540 aa11□□□□□ -0.65
RABGGTA-213ENST00000560127 TM9SF1O15321 606 aa11□□□□□ -0.65
RABGGTA-213ENST00000560127 STX11O75558 287 aa11□□□□□ -0.65
RABGGTA-213ENST00000560127 KRT33AO76009 404 aa11□□□□□ -0.65
RABGGTA-213ENST00000560127 FGF4P08620 206 aa11□□□□□ -0.65
RABGGTA-213ENST00000560127 TCN1P20061 433 aaPredicted RBP11□□□□□ -0.65
RABGGTA-213ENST00000560127 BGNP21810 368 aa11□□□□□ -0.65
RABGGTA-213ENST00000560127 MAGOHP61326 146 aaKnown RBP11□□□□□ -0.65
RABGGTA-213ENST00000560127 RPS26P62854 115 aaKnown RBP11□□□□□ -0.65
RABGGTA-213ENST00000560127 RPL38P63173 70 aaKnown RBP11□□□□□ -0.65
RABGGTA-213ENST00000560127 PLAURQ03405 335 aa11□□□□□ -0.65
RABGGTA-213ENST00000560127 SNTB2Q13425 540 aaKnown RBP11□□□□□ -0.65
RABGGTA-213ENST00000560127 CHI3L2Q15782 390 aa11□□□□□ -0.65
RABGGTA-213ENST00000560127 SPDYE7PQ495Y7 208 aa11□□□□□ -0.65
RABGGTA-213ENST00000560127 OTUD3Q5T2D3 398 aaPredicted RBP11□□□□□ -0.65
RABGGTA-213ENST00000560127 R3HCC1LQ7Z5L2 792 aaKnown RBP11□□□□□ -0.65
RABGGTA-213ENST00000560127 TMEM99Q8N816 258 aa11□□□□□ -0.65
RABGGTA-213ENST00000560127 NANPQ8TBE9 248 aa11□□□□□ -0.65
RABGGTA-213ENST00000560127 RNF217Q8TC41 542 aa11□□□□□ -0.65
RABGGTA-213ENST00000560127 AGR3Q8TD06 166 aa11□□□□□ -0.65
RABGGTA-213ENST00000560127 SFXN5Q8TD22 340 aa11□□□□□ -0.65
RABGGTA-213ENST00000560127 TWIST2Q8WVJ9 160 aa11□□□□□ -0.65
RABGGTA-213ENST00000560127 C22orf15Q8WYQ4 148 aa11□□□□□ -0.65
RABGGTA-213ENST00000560127 OR5P2Q8WZ92 322 aa11□□□□□ -0.65
RABGGTA-213ENST00000560127 RDH5Q92781 318 aa11□□□□□ -0.65
RABGGTA-213ENST00000560127 ZNF317Q96PQ6 595 aaPredicted RBP11□□□□□ -0.65
RABGGTA-213ENST00000560127 MRPL37Q9BZE1 423 aaKnown RBP11□□□□□ -0.65
RABGGTA-213ENST00000560127 SLC52A3Q9NQ40 469 aa11□□□□□ -0.65
RABGGTA-213ENST00000560127 PCDHGB4Q9UN71 923 aa11□□□□□ -0.65
RABGGTA-213ENST00000560127 TMED7Q9Y3B3 224 aa11□□□□□ -0.65
RABGGTA-213ENST00000560127 DOCK11Q5JSL3 2073 aa11□□□□□ -0.65
RABGGTA-213ENST00000560127 ZNF503-AS2A6NEH8 195 aa10.99□□□□□ -0.65
RABGGTA-213ENST00000560127 H3BQF6 201 aa10.99□□□□□ -0.65
RABGGTA-213ENST00000560127 LSM1O15116 133 aaKnown RBP10.99□□□□□ -0.65
RABGGTA-213ENST00000560127 SCAMP2O15127 329 aaKnown RBP10.99□□□□□ -0.65
RABGGTA-213ENST00000560127 BIRC5O15392 142 aa10.99□□□□□ -0.65
RABGGTA-213ENST00000560127 ZNF208O43345 1280 aa10.99□□□□□ -0.65
RABGGTA-213ENST00000560127 PPIHO43447 177 aaKnown RBP10.99□□□□□ -0.65
RABGGTA-213ENST00000560127 PLPP2O43688 288 aa10.99□□□□□ -0.65
RABGGTA-213ENST00000560127 SYNGR3O43761 229 aa10.99□□□□□ -0.65
RABGGTA-213ENST00000560127 UPK3AO75631 287 aa10.99□□□□□ -0.65
RABGGTA-213ENST00000560127 MPZL1O95297 269 aa10.99□□□□□ -0.65
RABGGTA-213ENST00000560127 C6orf47O95873 294 aa10.99□□□□□ -0.65
RABGGTA-213ENST00000560127 FSHBP01225 129 aa10.99□□□□□ -0.65
RABGGTA-213ENST00000560127 SERPINE1P05121 402 aa10.99□□□□□ -0.65
RABGGTA-213ENST00000560127 LINC00032P0C843 101 aa10.99□□□□□ -0.65
RABGGTA-213ENST00000560127 MYZAPP0CAP1 466 aa10.99□□□□□ -0.65
RABGGTA-213ENST00000560127 CBR1P16152 277 aa10.99□□□□□ -0.65
RABGGTA-213ENST00000560127 SELENOPP49908 381 aa10.99□□□□□ -0.65
RABGGTA-213ENST00000560127 TMEM33P57088 247 aa10.99□□□□□ -0.65
RABGGTA-213ENST00000560127 DAG1Q14118 895 aa10.99□□□□□ -0.65
RABGGTA-213ENST00000560127 OCLNQ16625 522 aa10.99□□□□□ -0.65
RABGGTA-213ENST00000560127 TUSC1Q2TAM9 212 aa10.99□□□□□ -0.65
RABGGTA-213ENST00000560127 AP1ARQ63HQ0 302 aa10.99□□□□□ -0.65
RABGGTA-213ENST00000560127 KRT80Q6KB66 452 aa10.99□□□□□ -0.65
RABGGTA-213ENST00000560127 ANKRD42Q8N9B4 389 aa10.99□□□□□ -0.65
RABGGTA-213ENST00000560127 OR5AK3PQ8NH89 298 aa10.99□□□□□ -0.65
RABGGTA-213ENST00000560127 DDIT4LQ96D03 193 aa10.99□□□□□ -0.65
RABGGTA-213ENST00000560127 SF3B5Q9BWJ5 86 aaKnown RBP10.99□□□□□ -0.65
RABGGTA-213ENST00000560127 ZNF350Q9GZX5 532 aa10.99□□□□□ -0.65
RABGGTA-213ENST00000560127 PIF1Q9H611 641 aa10.99□□□□□ -0.65
RABGGTA-213ENST00000560127 NTN4Q9HB63 628 aa10.99□□□□□ -0.65
RABGGTA-213ENST00000560127 NOX3Q9HBY0 568 aa10.99□□□□□ -0.65
RABGGTA-213ENST00000560127 MOV10Q9HCE1 1003 aaKnown RBP10.99□□□□□ -0.65
RABGGTA-213ENST00000560127 MED29Q9NX70 200 aa10.99□□□□□ -0.65
RABGGTA-213ENST00000560127 HAO1Q9UJM8 370 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms