RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 ZSWIM7Q19AV6 140 aa15.16■□□□□ 0.02
CRTC3-208ENST00000560098 TNFAIP8L3Q5GJ75 292 aa15.16■□□□□ 0.02
CRTC3-208ENST00000560098 RNF220Q5VTB9 566 aa15.16■□□□□ 0.02
CRTC3-208ENST00000560098 C1orf140Q5VVS0 124 aa15.16■□□□□ 0.02
CRTC3-208ENST00000560098 PRAMEF8Q5VWM4 474 aa15.16■□□□□ 0.02
CRTC3-208ENST00000560098 PRAMEF7Q5VXH5 474 aa15.16■□□□□ 0.02
CRTC3-208ENST00000560098 ARIH2OSQ8N7S6 290 aa15.16■□□□□ 0.02
CRTC3-208ENST00000560098 ALKBH3Q96Q83 286 aaPredicted RBP15.16■□□□□ 0.02
CRTC3-208ENST00000560098 CENPHQ9H3R5 247 aa15.16■□□□□ 0.02
CRTC3-208ENST00000560098 RASD1Q9Y272 281 aa15.16■□□□□ 0.02
CRTC3-208ENST00000560098 HEATR1Q9H583 2144 aaKnown RBP15.15■□□□□ 0.02
CRTC3-208ENST00000560098 A0A096LPI6 279 aa15.15■□□□□ 0.02
CRTC3-208ENST00000560098 HDAC3O15379 428 aa15.15■□□□□ 0.02
CRTC3-208ENST00000560098 NPIPB7O75200 414 aa15.15■□□□□ 0.02
CRTC3-208ENST00000560098 BCHEP06276 602 aa15.15■□□□□ 0.02
CRTC3-208ENST00000560098 TFPTP0C1Z6 253 aa15.15■□□□□ 0.02
CRTC3-208ENST00000560098 PRG2P13727 222 aa15.15■□□□□ 0.02
CRTC3-208ENST00000560098 NCF2P19878 526 aaPredicted RBP15.15■□□□□ 0.02
CRTC3-208ENST00000560098 THBS2P35442 1172 aa15.15■□□□□ 0.02
CRTC3-208ENST00000560098 DSTNP60981 165 aa15.15■□□□□ 0.02
CRTC3-208ENST00000560098 LARS2Q15031 903 aaKnown RBP15.15■□□□□ 0.02
CRTC3-208ENST00000560098 NIPAL3Q6P499 406 aa15.15■□□□□ 0.02
CRTC3-208ENST00000560098 LINGO2Q7L985 606 aa15.15■□□□□ 0.02
CRTC3-208ENST00000560098 SLC46A3Q7Z3Q1 461 aa15.15■□□□□ 0.02
CRTC3-208ENST00000560098 EPHX4Q8IUS5 362 aa15.15■□□□□ 0.02
CRTC3-208ENST00000560098 CLIP4Q8N3C7 705 aa15.15■□□□□ 0.02
CRTC3-208ENST00000560098 SLC38A5Q8WUX1 472 aa15.15■□□□□ 0.02
CRTC3-208ENST00000560098 BCL2L2Q92843 193 aaPredicted RBP15.15■□□□□ 0.02
CRTC3-208ENST00000560098 ZNF317Q96PQ6 595 aaPredicted RBP15.15■□□□□ 0.02
CRTC3-208ENST00000560098 VRK1Q99986 396 aaPredicted RBP15.15■□□□□ 0.02
CRTC3-208ENST00000560098 MYOZ1Q9NP98 299 aaPredicted RBP15.15■□□□□ 0.02
CRTC3-208ENST00000560098 KCNS2Q9ULS6 477 aa15.15■□□□□ 0.02
CRTC3-208ENST00000560098 ZNF232Q9UNY5 417 aa15.15■□□□□ 0.02
CRTC3-208ENST00000560098 YLPM1P49750 1951 aaKnown RBP15.15■□□□□ 0.02
CRTC3-208ENST00000560098 ARPC4-TTLL3A0A0A6YYG9 625 aa15.14■□□□□ 0.01
CRTC3-208ENST00000560098 LOC390937A0A1W2PQ73 354 aa15.14■□□□□ 0.01
CRTC3-208ENST00000560098 TRPC5OSA6NMA1 111 aa15.14■□□□□ 0.01
CRTC3-208ENST00000560098 B9A039 149 aa15.14■□□□□ 0.01
CRTC3-208ENST00000560098 UPK3AO75631 287 aa15.14■□□□□ 0.01
CRTC3-208ENST00000560098 SLC22A3O75751 556 aa15.14■□□□□ 0.01
CRTC3-208ENST00000560098 ANP32DO95626 131 aa15.14■□□□□ 0.01
CRTC3-208ENST00000560098 ZCCHC18P0CG32 403 aa15.14■□□□□ 0.01
CRTC3-208ENST00000560098 IDO1P14902 403 aa15.14■□□□□ 0.01
CRTC3-208ENST00000560098 IGFBP5P24593 272 aa15.14■□□□□ 0.01
CRTC3-208ENST00000560098 C3orf36Q3SXR2 165 aa15.14■□□□□ 0.01
CRTC3-208ENST00000560098 PDCD4Q53EL6 469 aaKnown RBP15.14■□□□□ 0.01
CRTC3-208ENST00000560098 RPS26P11Q5JNZ5 115 aaPredicted RBP15.14■□□□□ 0.01
CRTC3-208ENST00000560098 CEP85LQ5SZL2 805 aa15.14■□□□□ 0.01
CRTC3-208ENST00000560098 FAM166AQ6J272 317 aa15.14■□□□□ 0.01
CRTC3-208ENST00000560098 ANKRD16Q6P6B7 361 aa15.14■□□□□ 0.01
CRTC3-208ENST00000560098 MAGEE2Q8TD90 523 aaPredicted RBP15.14■□□□□ 0.01
CRTC3-208ENST00000560098 STK35Q8TDR2 534 aa15.14■□□□□ 0.01
CRTC3-208ENST00000560098 C3orf49Q96BT1 292 aa15.14■□□□□ 0.01
CRTC3-208ENST00000560098 FOXN4Q96NZ1 517 aa15.14■□□□□ 0.01
CRTC3-208ENST00000560098 PRR14Q9BWN1 585 aa15.14■□□□□ 0.01
CRTC3-208ENST00000560098 SPATA9Q9BWV2 254 aa15.14■□□□□ 0.01
CRTC3-208ENST00000560098 LINC00470Q9BZP3 86 aa15.14■□□□□ 0.01
CRTC3-208ENST00000560098 ARMC7Q9H6L4 198 aa15.14■□□□□ 0.01
CRTC3-208ENST00000560098 TPT1P8Q9HAU6 139 aa15.14■□□□□ 0.01
CRTC3-208ENST00000560098 MOV10Q9HCE1 1003 aaKnown RBP15.14■□□□□ 0.01
CRTC3-208ENST00000560098 THAP1Q9NVV9 213 aa15.14■□□□□ 0.01
CRTC3-208ENST00000560098 CRNNQ9UBG3 495 aaPredicted RBP15.14■□□□□ 0.01
CRTC3-208ENST00000560098 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.14■□□□□ 0.01
CRTC3-208ENST00000560098 CHST2Q9Y4C5 530 aa15.14■□□□□ 0.01
CRTC3-208ENST00000560098 V9GYY5 206 aaPredicted RBP15.14■□□□□ 0.01
CRTC3-208ENST00000560098 A0A096LPE4 126 aa15.13■□□□□ 0.01
CRTC3-208ENST00000560098 LOC100289279A0A1B0GTE1 492 aa15.13■□□□□ 0.01
CRTC3-208ENST00000560098 A0A1W2PPZ6 126 aa15.13■□□□□ 0.01
CRTC3-208ENST00000560098 TMEM229AB2RXF0 380 aa15.13■□□□□ 0.01
CRTC3-208ENST00000560098 NR5A2O00482 541 aa15.13■□□□□ 0.01
CRTC3-208ENST00000560098 PDE5AO76074 875 aa15.13■□□□□ 0.01
CRTC3-208ENST00000560098 OR4A8P0C604 315 aa15.13■□□□□ 0.01
CRTC3-208ENST00000560098 CECR9P0C854 216 aa15.13■□□□□ 0.01
CRTC3-208ENST00000560098 SRD5A1P18405 259 aa15.13■□□□□ 0.01
CRTC3-208ENST00000560098 TUBA1BP68363 451 aa15.13■□□□□ 0.01
CRTC3-208ENST00000560098 TUBA4AP68366 448 aa15.13■□□□□ 0.01
CRTC3-208ENST00000560098 NAAAQ02083 359 aa15.13■□□□□ 0.01
CRTC3-208ENST00000560098 EFNB3Q15768 340 aa15.13■□□□□ 0.01
CRTC3-208ENST00000560098 ADIPOQQ15848 244 aa15.13■□□□□ 0.01
CRTC3-208ENST00000560098 CARTPTQ16568 116 aa15.13■□□□□ 0.01
CRTC3-208ENST00000560098 KRTAP24-1Q3LI83 254 aa15.13■□□□□ 0.01
CRTC3-208ENST00000560098 HHATQ5VTY9 493 aa15.13■□□□□ 0.01
CRTC3-208ENST00000560098 TUBA1AQ71U36 451 aa15.13■□□□□ 0.01
CRTC3-208ENST00000560098 SERPINA11Q86U17 422 aa15.13■□□□□ 0.01
CRTC3-208ENST00000560098 ANKS4BQ8N8V4 417 aa15.13■□□□□ 0.01
CRTC3-208ENST00000560098 MFSD8Q8NHS3 518 aa15.13■□□□□ 0.01
CRTC3-208ENST00000560098 MSI2Q96DH6 328 aaKnown RBP15.13■□□□□ 0.01
CRTC3-208ENST00000560098 TMEM19Q96HH6 336 aa15.13■□□□□ 0.01
CRTC3-208ENST00000560098 CHODLQ9H9P2 273 aa15.13■□□□□ 0.01
CRTC3-208ENST00000560098 CACYBPQ9HB71 228 aaKnown RBP15.13■□□□□ 0.01
CRTC3-208ENST00000560098 THUMPD1Q9NXG2 353 aaKnown RBP15.13■□□□□ 0.01
CRTC3-208ENST00000560098 IGHV4-61A0A0C4DH41 118 aa15.12■□□□□ 0.01
CRTC3-208ENST00000560098 A0A0G2JPF8 293 aa15.12■□□□□ 0.01
CRTC3-208ENST00000560098 SLC35F4A4IF30 521 aa15.12■□□□□ 0.01
CRTC3-208ENST00000560098 HNRNPCL2B2RXH8 293 aa15.12■□□□□ 0.01
CRTC3-208ENST00000560098 HNRNPCL3B7ZW38 293 aa15.12■□□□□ 0.01
CRTC3-208ENST00000560098 FTCDNL1E5RQL4 147 aa15.12■□□□□ 0.01
CRTC3-208ENST00000560098 HNRNPCL1O60812 293 aaKnown RBP15.12■□□□□ 0.01
CRTC3-208ENST00000560098 AHSA1O95433 338 aa15.12■□□□□ 0.01
CRTC3-208ENST00000560098 IGLV1-44P01699 117 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms